BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0580.0002.p (228 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4J1D9.1 A4J1D9_DESRM Putative uncharacterized protein 272 2e-71 C1TA15.1 C1TA15_9FIRM Putative uncharacterized protein 266 1e-69 A8MM92.1 A8MM92_ALKOO Putative uncharacterized protein 266 1e-69 C4IIB7.1 C4IIB7_CLOBU Putative uncharacterized protein 224 6e-57 B1QUH6.1 B1QUH6_CLOBU Putative uncharacterized protein 224 6e-57 >A4J1D9.1 A4J1D9_DESRM Putative uncharacterized protein Length = 227 Score = 272 bits (695), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 127/225 (56%), Positives = 169/225 (75%), Gaps = 2/225 (0%) Query: 1 MKYDVLYEGAFAMLKVHLNPGESVKAEMGAMVAMSPGVELRGTVDXXXXXXXXXXXSGEK 60 MK+ +LY GAF +++++L GESVKAE AMVAMS +++ G +D +GE Sbjct: 1 MKHKILYPGAFPLVQLNLEQGESVKAESDAMVAMSSTIDVEGKMDGGLLGGLARMVAGES 60 Query: 61 FFFQELTATRGQSEVLLSPGAIGDIQAIELDGSYKLYVQKDGFLAGTHGIQVNTKMQNLT 120 FFFQ LTA RG EVLL+P GDI +ELDGSY L VQKDGFLAG+ GIQV+TKMQNL+ Sbjct: 61 FFFQTLTARRGAGEVLLAPAVPGDIIDVELDGSYSLMVQKDGFLAGSAGIQVSTKMQNLS 120 Query: 121 RGLFSGEGFFIIEISGSGTVFLSSFGAIHAINLGPGEEMIIDNXXXXLVAWPGYMDYKVE 180 +GLFSGEGFF++++SG G VF++++G IH INL PG+E ++DN LVAWP YM++ +E Sbjct: 121 QGLFSGEGFFVVKVSGQGIVFINTYGGIHVINLEPGQEFVVDN--SHLVAWPEYMNFSIE 178 Query: 181 KAASGWLNSLTSGEALVCRFRGEGVVLVQSRNPGSFGTWIKSFVP 225 KA+SGW+++ TSGE VC+FRG G V++Q+RNP FG WI+ F+P Sbjct: 179 KASSGWISTFTSGEVAVCKFRGPGPVIIQTRNPRGFGNWIRQFIP 223 >C1TA15.1 C1TA15_9FIRM Putative uncharacterized protein Length = 228 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 127/227 (55%), Positives = 164/227 (72%), Gaps = 2/227 (0%) Query: 1 MKYDVLYEGAFAMLKVHLNPGESVKAEMGAMVAMSPGVELRGTVDXXXXXXXXXXXSGEK 60 MK+ +LY GAF +L+V L GES+KAE AMV+MS +++ G +D +GE Sbjct: 1 MKHKILYPGAFPLLEVELQHGESIKAESDAMVSMSDTLDVEGKMDGGIMGGLARMVAGES 60 Query: 61 FFFQELTATRGQSEVLLSPGAIGDIQAIELDGSYKLYVQKDGFLAGTHGIQVNTKMQNLT 120 FFFQ LTA RG + LL+P A GDI +ELDGSY L VQKDGF AG+ +QV+ KMQNL Sbjct: 61 FFFQTLTAKRGPGKALLAPSAPGDIIDVELDGSYSLVVQKDGFFAGSRDLQVSAKMQNLA 120 Query: 121 RGLFSGEGFFIIEISGSGTVFLSSFGAIHAINLGPGEEMIIDNXXXXLVAWPGYMDYKVE 180 +G+FSGEGFF++++SG G VFLSS+G IH INL GEE+++DN LVAWP YM Y VE Sbjct: 121 QGIFSGEGFFVLKVSGQGIVFLSSYGGIHVINLEKGEEVVVDN--GHLVAWPEYMSYTVE 178 Query: 181 KAASGWLNSLTSGEALVCRFRGEGVVLVQSRNPGSFGTWIKSFVPSR 227 KA+ GW+++ TSGE VCRFRG G V++Q+RNP FG WI+ F+P+R Sbjct: 179 KASKGWISTFTSGEVAVCRFRGPGPVIIQTRNPKGFGHWIRQFIPTR 225 >A8MM92.1 A8MM92_ALKOO Putative uncharacterized protein Length = 226 Score = 266 bits (680), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 131/225 (58%), Positives = 167/225 (74%), Gaps = 2/225 (0%) Query: 1 MKYDVLYEGAFAMLKVHLNPGESVKAEMGAMVAMSPGVELRGTVDXXXXXXXXXXXSGEK 60 MKY++LY AF ++K++L G+ +KAE AMV+MSP ++L G ++ +GEK Sbjct: 1 MKYEILYGEAFPIVKINLQKGDRIKAESDAMVSMSPTIDLEGKLEGGLLKGLGRMLAGEK 60 Query: 61 FFFQELTATRGQSEVLLSPGAIGDIQAIELDGSYKLYVQKDGFLAGTHGIQVNTKMQNLT 120 FFFQ LTA RG EVLL+ G +ELDGSY L VQKDGFLA + I V+T+MQNLT Sbjct: 61 FFFQTLTANRGPGEVLLASSVPGGTVDVELDGSYGLCVQKDGFLAASDSISVDTQMQNLT 120 Query: 121 RGLFSGEGFFIIEISGSGTVFLSSFGAIHAINLGPGEEMIIDNXXXXLVAWPGYMDYKVE 180 RGLFSGEGFFI++I G GTVFL+S+GAIH INL GEE++IDN LVAWP YM Y +E Sbjct: 121 RGLFSGEGFFILKIGGRGTVFLNSYGAIHPINLEAGEEVVIDN--SHLVAWPDYMQYNIE 178 Query: 181 KAASGWLNSLTSGEALVCRFRGEGVVLVQSRNPGSFGTWIKSFVP 225 KA+SGW++S+TSGE+LVCRFRG G VL+Q+RNP FG W++ F+P Sbjct: 179 KASSGWISSVTSGESLVCRFRGPGTVLIQTRNPRDFGQWVRQFMP 223 >C4IIB7.1 C4IIB7_CLOBU Putative uncharacterized protein Length = 226 Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 110/221 (49%), Positives = 148/221 (66%), Gaps = 4/221 (1%) Query: 1 MKYDVLYEGAFAMLKVHLNPGESVKAEMGAMVAMSPGVELRGTVDXXXXXXXXXXXSGEK 60 M Y++L+EG F M+K HL GE +KAE AM+ MSP +++ G + +GEK Sbjct: 1 MNYEILHEGTFPMVKCHLEHGEQIKAESNAMITMSPTIDVTGNTEGGIFKGIARMAAGEK 60 Query: 61 FFFQELTATRGQSEVLLSPGAIGDIQAIELDGSYKLYVQKDGFLAGTHGIQVNTKMQNLT 120 FFFQ L+A RG +++ + GDI I L+G+ L +QKDGFLA T + + TK+QNLT Sbjct: 61 FFFQHLSANRGAGDIIFAHSLPGDIVPITLNGT-GLKIQKDGFLASTIDVDLETKVQNLT 119 Query: 121 RGLFSGEGFFIIEISGSGTVFLSSFGAIHAINLGPGEEMIIDNXXXXLVAWPGYMDYKVE 180 +GLFSGEGFF++ G GTVF+SS+GAIH INL EE+IIDN LVAW ++Y +E Sbjct: 120 KGLFSGEGFFVLGARGQGTVFVSSYGAIHEINLNSNEEIIIDN--SHLVAWDETLEYNIE 177 Query: 181 KAA-SGWLNSLTSGEALVCRFRGEGVVLVQSRNPGSFGTWI 220 KA+ GW++S TSGE LVCRF+G G + +Q+RNP WI Sbjct: 178 KASKKGWISSFTSGEGLVCRFKGPGKIFIQTRNPDGMKNWI 218 >B1QUH6.1 B1QUH6_CLOBU Putative uncharacterized protein Length = 226 Score = 224 bits (570), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 110/221 (49%), Positives = 148/221 (66%), Gaps = 4/221 (1%) Query: 1 MKYDVLYEGAFAMLKVHLNPGESVKAEMGAMVAMSPGVELRGTVDXXXXXXXXXXXSGEK 60 M Y++L+EG F M+K HL GE +KAE AM+ MSP +++ G + +GEK Sbjct: 1 MNYEILHEGTFPMVKCHLEHGEQIKAESNAMITMSPTIDVTGNTEGGIFKGIARMAAGEK 60 Query: 61 FFFQELTATRGQSEVLLSPGAIGDIQAIELDGSYKLYVQKDGFLAGTHGIQVNTKMQNLT 120 FFFQ L+A RG +++ + GDI I L+G+ L +QKDGFLA T + + TK+QNLT Sbjct: 61 FFFQHLSANRGAGDIIFAHSLPGDIVPITLNGT-GLKIQKDGFLASTIDVDLETKVQNLT 119 Query: 121 RGLFSGEGFFIIEISGSGTVFLSSFGAIHAINLGPGEEMIIDNXXXXLVAWPGYMDYKVE 180 +GLFSGEGFF++ G GTVF+SS+GAIH INL EE+IIDN LVAW ++Y +E Sbjct: 120 KGLFSGEGFFVLGARGQGTVFVSSYGAIHEINLNSNEEIIIDN--SHLVAWDETLEYNIE 177 Query: 181 KAA-SGWLNSLTSGEALVCRFRGEGVVLVQSRNPGSFGTWI 220 KA+ GW++S TSGE LVCRF+G G + +Q+RNP WI Sbjct: 178 KASKKGWISSFTSGEGLVCRFKGPGKIFIQTRNPDGMKNWI 218 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,275,689,291 Number of extensions: 46885434 Number of successful extensions: 94742 Number of sequences better than 1.0e-05: 472 Number of HSP's gapped: 93410 Number of HSP's successfully gapped: 472 Length of query: 228 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 97 Effective length of database: 1,826,543,238 Effective search space: 177174694086 Effective search space used: 177174694086 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)