BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0579.0061.p (416 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDB4.1 B3KDB4_9BACI Major facilitator superfamily MFS_1 711 0.0 A6LS31.1 A6LS31_CLOB8 Major facilitator superfamily MFS_1 422 e-116 C1TAE5.1 C1TAE5_9FIRM Major Facilitator Superfamily transporter 398 e-109 C3BKR1.1 C3BKR1_9BACI Permease 397 e-109 C2W8G7.1 C2W8G7_BACCE Permease 397 e-108 >B3KDB4.1 B3KDB4_9BACI Major facilitator superfamily MFS_1 Length = 416 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/416 (83%), Positives = 366/416 (87%) Query: 1 LNRQEKSTTAPSLLRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLISV 60 + R +KST APSLLRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLISV Sbjct: 1 MTRHDKSTQAPSLLRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLISV 60 Query: 61 AEFAPIFVFSFIGGTFADRWRPKRTMIWCDXXXXXXXXXXXXXXHYGSWHSVYLVAFISA 120 AEFAPIFVFSFIGGTFADRWRPKRTMIWCD HYGSWHSVYLVAFISA Sbjct: 61 AEFAPIFVFSFIGGTFADRWRPKRTMIWCDLLSAVSVFVVLLTIHYGSWHSVYLVAFISA 120 Query: 121 ILSQFSQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIAI 180 ILSQFSQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIAI Sbjct: 121 ILSQFSQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIAI 180 Query: 181 MGVVFLLSALVLIRLPEDNLKPKTDAAKGQFRKEFIEGFRYVWNSKVLRMLGLAFIXXXX 240 MG VFLLSALVL+RLPEDN+KP+T AAKGQFR +F+EGFRYVW S+VLRMLGLAF+ Sbjct: 181 MGAVFLLSALVLVRLPEDNMKPQTIAAKGQFRGDFVEGFRYVWQSQVLRMLGLAFVLAGL 240 Query: 241 XXXXXXXXXXFIVTERLGKSKEFLQYLLMVNGAAMLIGGGVVAVFAKRVPPQLLLAIGML 300 FIVTERLG+S+EFLQYLLMVNGAAMLIGGG+VAVFAKRVPPQLLLAIGML Sbjct: 241 AVGVAQALNLFIVTERLGRSEEFLQYLLMVNGAAMLIGGGIVAVFAKRVPPQLLLAIGML 300 Query: 301 AGAVCTIIVGYSTSVPVTLTVQFLNGLVFPCIHIGISTMILKWSHSSIVGRVNGVLNPMF 360 +GAVCT IVGYSTS+P+TLTVQFLNGLVFPCIHIGISTMILKWS++SIVGRVNGVLNPMF Sbjct: 301 SGAVCTTIVGYSTSIPLTLTVQFLNGLVFPCIHIGISTMILKWSNASIVGRVNGVLNPMF 360 Query: 361 VGMMVISMSFAGALKDAFSLGTIYSXXXXXXXXXXXVMVPIMNQKAPDHAHAVQET 416 VGMMVISMSFAGALKDAFSL TIYS VMVPIMNQKAPDHAH Q+T Sbjct: 361 VGMMVISMSFAGALKDAFSLSTIYSGAGLLFLLGSLVMVPIMNQKAPDHAHLAQQT 416 >A6LS31.1 A6LS31_CLOB8 Major facilitator superfamily MFS_1 Length = 411 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 211/380 (55%), Positives = 266/380 (70%), Gaps = 2/380 (0%) Query: 6 KSTTA-PSLLRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLISVAEFA 64 KST + S RNRF++ I+ SS+ LQIGIWVRNFAILL+V ++TNN+P A+SLISVAEFA Sbjct: 3 KSTMSMSSFFRNRFVRVIIASSIFLQIGIWVRNFAILLFVMEKTNNNPIAVSLISVAEFA 62 Query: 65 PIFVFSFIGGTFADRWRPKRTMIWCDXXXXXXXXXXXXXXHYGSWHSVYLVAFISAILSQ 124 PIF+FSFIGGTFADRWRPKRTM+WCD + +W +V+ V FIS+ILSQ Sbjct: 63 PIFIFSFIGGTFADRWRPKRTMVWCDLLSAISVFAVLLTIIFATWEAVFFVTFISSILSQ 122 Query: 125 FSQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIAIMGVV 184 FSQPS+M+LFK HV EE +Q GMA+FQ+LM+IFM++GP LGT V+ FG++ SI++MGV Sbjct: 123 FSQPSAMKLFKVHVPEEFMQTGMAIFQTLMSIFMIIGPALGTIVFQKFGIDISISVMGVA 182 Query: 185 FLLSALVLIRLPEDNLKPKTDAAKGQFRKEFIEGFRYVWNSKVLRMLGLAFIXXXXXXXX 244 FLLSA VL LP D + KT+ A F +E EGF YVW + L +LG F Sbjct: 183 FLLSASVLTLLPADEIIEKTETAN-HFLEELKEGFAYVWQQRELTILGSVFAVSGLAVGI 241 Query: 245 XXXXXXFIVTERLGKSKEFLQYLLMVNGAAMLIGGGVVAVFAKRVPPQLLLAIGMLAGAV 304 F++ ERLG KE LQ LLMVNG+AM IGGG+V +K+V PQ LLAIG++ + Sbjct: 242 IQPLGVFLIVERLGLPKENLQLLLMVNGSAMFIGGGLVMTISKKVMPQKLLAIGLIVNTI 301 Query: 305 CTIIVGYSTSVPVTLTVQFLNGLVFPCIHIGISTMILKWSHSSIVGRVNGVLNPMFVGMM 364 + +G S+S + L QFLNG PCI IGI+T+IL+ + S VGRVNGVLNPMF+G M Sbjct: 302 SMVGMGLSSSWIIILLFQFLNGFFMPCIQIGINTLILQLTKSEFVGRVNGVLNPMFMGFM 361 Query: 365 VISMSFAGALKDAFSLGTIY 384 VI+MS G LK FSL +Y Sbjct: 362 VITMSITGWLKSQFSLTILY 381 >C1TAE5.1 C1TAE5_9FIRM Major Facilitator Superfamily transporter Length = 422 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/379 (53%), Positives = 269/379 (70%), Gaps = 1/379 (0%) Query: 6 KSTTAPSLLRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLISVAEFAP 65 K++ L RNRF+Q I+LS+VLLQIGIWVRNF ILLYV D+T N+PY +SLISVAEF P Sbjct: 18 KTSKDSGLFRNRFIQVIILSNVLLQIGIWVRNFGILLYVMDKTGNNPYYVSLISVAEFGP 77 Query: 66 IFVFSFIGGTFADRWRPKRTMIWCDXXXXXXXXXXXXXXHYGSWHSVYLVAFISAILSQF 125 +F+FSFIGGTFADRWRPK TM+ D +GSWH+V+ V +S+ILSQF Sbjct: 78 LFLFSFIGGTFADRWRPKLTMVLSDFLSAVSVFIVLLTIIFGSWHAVFFVTLVSSILSQF 137 Query: 126 SQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIAIMGVVF 185 SQPS+M+LFK H+ EQLQ GMA+FQ++M+IF+++GP+LGTF+Y FG+ SI IMG+ F Sbjct: 138 SQPSAMKLFKVHLTPEQLQSGMAIFQTVMSIFVIIGPLLGTFIYQRFGINLSIGIMGLAF 197 Query: 186 LLSALVLIRLPEDNLKPKTDAAKGQFRKEFIEGFRYVWNSKVLRMLGLAFIXXXXXXXXX 245 L+SA VL LP N + + +F + EGFRYVW KVL +LG F+ Sbjct: 198 LMSAGVLTFLPSQN-GETHEKSTAKFWHDLAEGFRYVWRRKVLLVLGGIFVCAGLGVGII 256 Query: 246 XXXXXFIVTERLGKSKEFLQYLLMVNGAAMLIGGGVVAVFAKRVPPQLLLAIGMLAGAVC 305 FI+TERLG K+ LQ+L++ +G+AMLIGGG++ +K++ PQ LLA G+L A+ Sbjct: 257 QPLGIFIITERLGLPKDNLQWLMVASGSAMLIGGGIILGISKKIAPQKLLAFGLLVNAIS 316 Query: 306 TIIVGYSTSVPVTLTVQFLNGLVFPCIHIGISTMILKWSHSSIVGRVNGVLNPMFVGMMV 365 ++VG ST++ +TL QFL+GLV PCI IG+ST++L S + VGRVNGVLNP+F+G MV Sbjct: 317 IVVVGLSTNLIITLCFQFLSGLVMPCIQIGVSTLMLNMSEEAYVGRVNGVLNPLFIGAMV 376 Query: 366 ISMSFAGALKDAFSLGTIY 384 +++S AG LK FSL T Y Sbjct: 377 LTISIAGLLKAKFSLVTSY 395 >C3BKR1.1 C3BKR1_9BACI Permease Length = 423 Score = 397 bits (1020), Expect = e-109, Method: Compositional matrix adjust. Identities = 203/417 (48%), Positives = 281/417 (67%), Gaps = 5/417 (1%) Query: 3 RQEKSTTAPSLLRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLISVAE 62 + ++ + +L+NRF+Q I+ S++ LQIGIW+RNFA+LLYV + TN D +AIS+ISVAE Sbjct: 6 KAKQKSNISVVLKNRFVQAIIASALFLQIGIWIRNFAVLLYVMEMTNGDAFAISMISVAE 65 Query: 63 FAPIFVFSFIGGTFADRWRPKRTMIWCDXXXXXXXXXXXXXXHYGSWHSVYLVAFISAIL 122 FAPIF+FSFIGGTFADRW+PKRTMIWC+ +G+W V+ V ISAIL Sbjct: 66 FAPIFIFSFIGGTFADRWKPKRTMIWCEALSSLSVFAVLFTLMFGTWKVVFFVTLISAIL 125 Query: 123 SQFSQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIAIMG 182 SQFSQPS M+LFK H++ E++Q M+L+Q++ AIFMVLGP+LGTF++ FG+ TSI + G Sbjct: 126 SQFSQPSGMKLFKQHLSTEEVQLAMSLYQTIFAIFMVLGPILGTFIFQAFGIYTSIIVTG 185 Query: 183 VVFLLSALVLIRLPEDNLKPKTDAAKGQFRKEFIEGFRYVWNSKVLRMLGLAFIXXXXXX 242 + FL +ALVL+ LP D ++ + + K +E ++G +YV K L +LG+ F+ Sbjct: 186 IAFLFAALVLLFLPRD-IEEQEEKKKVSLLQEMVDGIKYVKAKKTLTLLGICFMAAGLGI 244 Query: 243 XXXXXXXXFIVTERLGKSKEFLQYLLMVNGAAMLIGGGVVAVFAKRVPPQLLLAIGMLAG 302 FIVTE+LG SKE LQ+LL VNGA M+IGG + VFAK V PQ +L +GM A Sbjct: 245 GLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIIGGALAMVFAKNVAPQKMLILGMFAQ 304 Query: 303 AVCTIIVGYSTSVPVTLTVQFLNGLVFPCIHIGISTMILKWSHSSIVGRVNGVLNPMFVG 362 AV I+G+ST++ +TL QF +GL PCI IGI+T+I++ S + +GRVNG+L+P+F G Sbjct: 305 AVGIGIIGFSTNLWITLIAQFFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTG 364 Query: 363 MMVISMSFAGALKDAFSLGTIYSXXXXXXXXXXXVMVPIMNQK----APDHAHAVQE 415 MV++MS AG+LK+ FSL T+Y ++PI N K + AVQ Sbjct: 365 SMVLTMSIAGSLKEVFSLSTMYEGTALLFIIGSLFILPIYNLKPVVGTSNEGGAVQH 421 >C2W8G7.1 C2W8G7_BACCE Permease Length = 421 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 208/420 (49%), Positives = 283/420 (67%), Gaps = 6/420 (1%) Query: 1 LNRQEKSTTAPSL-LRNRFLQTILLSSVLLQIGIWVRNFAILLYVADRTNNDPYAISLIS 59 +N + K + S+ L+NRF+Q I+ S++ LQIGIWVRNFA+LLYV + TN D +AIS+IS Sbjct: 1 MNVEAKQKSNMSVVLKNRFVQAIIASALFLQIGIWVRNFAVLLYVMEMTNGDAFAISMIS 60 Query: 60 VAEFAPIFVFSFIGGTFADRWRPKRTMIWCDXXXXXXXXXXXXXXHYGSWHSVYLVAFIS 119 VAEFAPIF+FSFIGGTFADRW+PKRTMIWC+ +GSW V+ V IS Sbjct: 61 VAEFAPIFIFSFIGGTFADRWKPKRTMIWCETLSSLSVFAVLLTLIFGSWKVVFFVTLIS 120 Query: 120 AILSQFSQPSSMRLFKYHVAEEQLQQGMALFQSLMAIFMVLGPMLGTFVYSTFGLETSIA 179 AILSQFSQPS M+LFK H++ E++Q M+L+Q++ AIFM+LGP+LGTF++ FG+ TSI Sbjct: 121 AILSQFSQPSGMKLFKQHLSTEEVQLAMSLYQTIFAIFMILGPILGTFIFQAFGIYTSII 180 Query: 180 IMGVVFLLSALVLIRLPEDNLKPKTDAAKGQFRKEFIEGFRYVWNSKVLRMLGLAFIXXX 239 + G+ FLL+A VL+ LP+D ++ + K +E I+G +YV K L +LG+ F+ Sbjct: 181 VTGIAFLLAAFVLLFLPKD-VEEQEKKKKVSLLQEMIDGVKYVKAKKALTLLGICFMAAG 239 Query: 240 XXXXXXXXXXXFIVTERLGKSKEFLQYLLMVNGAAMLIGGGVVAVFAKRVPPQLLLAIGM 299 FIVTE+LG SKE LQ+LL VNGA M+IGG + VFAK V PQ +L GM Sbjct: 240 LGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIIGGALAMVFAKNVAPQKMLIFGM 299 Query: 300 LAGAVCTIIVGYSTSVPVTLTVQFLNGLVFPCIHIGISTMILKWSHSSIVGRVNGVLNPM 359 LA A+ I+G+ST++ +TL QF +GL PCI IGI+T+I++ S + +GRVNG+L+P+ Sbjct: 300 LAQAIGIGIIGFSTNLWITLIAQFFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPL 359 Query: 360 FVGMMVISMSFAGALKDAFSLGTIYSXXXXXXXXXXXVMVPIMNQK----APDHAHAVQE 415 F G MV++MS AG+LK+ FSL T+Y ++PI N K + AVQ Sbjct: 360 FTGSMVLTMSVAGSLKEVFSLSTMYEGTAVLFIIGSLFILPIYNLKPIVETSNEGGAVQH 419 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.140 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,019,364,718 Number of extensions: 72445470 Number of successful extensions: 306902 Number of sequences better than 1.0e-05: 1293 Number of HSP's gapped: 305988 Number of HSP's successfully gapped: 1293 Length of query: 416 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 278 Effective length of database: 1,760,596,133 Effective search space: 489445724974 Effective search space used: 489445724974 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 132 (55.5 bits)