BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0579.0059.p
         (79 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0Z4B3.1 C0Z4B3_BREBN Putative uncharacterized protein                 66   1e-09
B3K5R2.1 B3K5R2_9BACI Putative uncharacterized protein                 64   6e-09

>C0Z4B3.1 C0Z4B3_BREBN Putative uncharacterized protein
          Length = 77

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/56 (51%), Positives = 39/56 (69%)

Query: 17 LEVPYMLRKRLKKELWVFSIXXXXGVGISSAKALQWTIPTPLDWITAVYKPFTEFL 72
           EVPY+ R  +KKE+ VF I    G G+  A++L+  IP PLDWIT VYKPF++F+
Sbjct: 17 FEVPYLRRNAMKKEMLVFFILLVVGTGLGIAESLKVNIPNPLDWITFVYKPFSDFI 72


>B3K5R2.1 B3K5R2_9BACI Putative uncharacterized protein
          Length = 79

 Score = 63.5 bits (153), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/79 (44%), Positives = 51/79 (64%)

Query: 1  MAGILGIMLSAAVIMILEVPYMLRKRLKKELWVFSIXXXXGVGISSAKALQWTIPTPLDW 60
          M  I  I +SAA+I  LE+P MLR++  +E+W F+      +GIS A+ +   IPTPL  
Sbjct: 1  MLNIALIAVSAAIITWLELPRMLREKEYREVWGFAAFMIIAIGISVAQTILRDIPTPLVM 60

Query: 61 ITAVYKPFTEFLTRIGLIK 79
          IT  +KP +++LT IGLI+
Sbjct: 61 ITIAFKPLSDWLTAIGLIQ 79


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.328    0.142    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 429,205,494
Number of extensions: 12388929
Number of successful extensions: 40171
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 40173
Number of HSP's successfully gapped: 2
Length of query: 79
Length of database: 3,060,696,203
Length adjustment: 50
Effective length of query: 29
Effective length of database: 2,589,645,453
Effective search space: 75099718137
Effective search space used: 75099718137
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 125 (52.8 bits)