BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0579.0046.p (479 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DGS0.1 B1DGS0_9BACL Glycoside hydrolase family 43 724 0.0 A9KIE4.1 A9KIE4_CLOPH Glycoside hydrolase family 43 599 e-169 B0MKI7.1 B0MKI7_9FIRM Putative uncharacterized protein (Fragment) 546 e-153 B3JGQ3.1 B3JGQ3_9BACE Putative uncharacterized protein 398 e-109 B3KJH6.1 B3KJH6_9BACI Glycoside hydrolase family 43 397 e-108 >B1DGS0.1 B1DGS0_9BACL Glycoside hydrolase family 43 Length = 499 Score = 724 bits (1870), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/478 (70%), Positives = 402/478 (84%), Gaps = 2/478 (0%) Query: 1 VANTYYLVCSSFQYFPGVPIFESKDLINWVQIGHCLTRTSQVQLDTVDSSGGVFAPTLRY 60 V +TYYLVCSS QYFPGVP+FESKDL+NW QIGHCLTR SQ+QL+ V+SSGGVFAPTLR Sbjct: 20 VGDTYYLVCSSMQYFPGVPLFESKDLVNWHQIGHCLTRKSQIQLEKVNSSGGVFAPTLRN 79 Query: 61 NNGRFYMTTTNDTTRQNFYVWTDDIYGEWSEPIHVDQGGIDPDLYFEDSKTYFMSNGTDD 120 ++GRFYMTTTNDTTRQNFYVWTDDIYGEWSEP++VDQGGIDPDL+FED K YFMSNG+DD Sbjct: 80 HDGRFYMTTTNDTTRQNFYVWTDDIYGEWSEPVYVDQGGIDPDLFFEDGKAYFMSNGSDD 139 Query: 121 YGVGGIIQCEIEIETGRKLTPSRSVWQGSGGRYLESPHLYKIHGRYYLLAAEGGTEYGHM 180 +GVGGI+QC+I+I TGRKLTPSR++WQG+GGR+LE+PH+Y I G YYL+AAEGGTE+GHM Sbjct: 140 FGVGGIVQCQIDIATGRKLTPSRTIWQGTGGRFLEAPHMYNIKGLYYLVAAEGGTEFGHM 199 Query: 181 ITYARGDSPSGPFEAYSNNPVLTNRNLGGYELQGVGHGDLVQDSDKNWWLIHLGFRQTGQ 240 +TYAR +S GPFEAY NPVLTNRNLGGYE+Q VGHGDL+QD D NWW++HLGFRQ+GQ Sbjct: 200 VTYARSESLHGPFEAYPLNPVLTNRNLGGYEVQAVGHGDLIQDPDGNWWMLHLGFRQSGQ 259 Query: 241 YLTYHHLGREVFLTPVTFGDDGWFTAGHHGTTLMSFETERIADTIIQQEKKVFTFENTDW 300 +L YHHLGREVFLTPVTF +DGWFTAGH+GTTL SFE I D ++Q EK FTFENTDW Sbjct: 260 WLAYHHLGREVFLTPVTFEEDGWFTAGHNGTTLSSFENALIPDHVVQTEKTSFTFENTDW 319 Query: 301 NLDWCYLRHPVPGNYLLEPDKVRLKGTGVTLDAPFSPTFVGIRQKDFNGVISCRISLTNG 360 + +WCYLR P NY LE +K+ LKGT ++LD SPTF+GIRQKDF ISC ISL +G Sbjct: 320 SKEWCYLRTPEQDNYTLERNKLTLKGTEISLDQADSPTFIGIRQKDFIADISCDISLISG 379 Query: 361 EAGITLYMDENHHYDLALRNHDHGYEIIERLNVGDIKSIEKAVELGHCNSATLVIKSAPT 420 EAG+TLYMDENHHYD A+R + GY++I+RLN+GDIKSI V L N A+L+IK++ T Sbjct: 380 EAGLTLYMDENHHYDFAIRKIEDGYKVIQRLNIGDIKSIVHDVNLKQFNQASLLIKASHT 439 Query: 421 HYRFYAQIDDSEILLGAAHTKYLSSEVAGGFTGVLIGMYATGESPDSHAEFTDFSCEY 478 Y F+ D I LG+A +KYLSSEVAGGFTGV+IG+YA G +SHAEF++F CEY Sbjct: 440 RYSFHIVTDSGLIDLGSAQSKYLSSEVAGGFTGVIIGLYAHGH--NSHAEFSNFKCEY 495 >A9KIE4.1 A9KIE4_CLOPH Glycoside hydrolase family 43 Length = 498 Score = 599 bits (1544), Expect = e-169, Method: Compositional matrix adjust. Identities = 291/474 (61%), Positives = 360/474 (75%), Gaps = 2/474 (0%) Query: 5 YYLVCSSFQYFPGVPIFESKDLINWVQIGHCLTRTSQVQLDTVDSSGGVFAPTLRYNNGR 64 YYLVCSS QYFPGVP+FES+DL+NW QIGHCLTR Q+ L V SSGGVFAP++RY GR Sbjct: 24 YYLVCSSMQYFPGVPLFESEDLVNWTQIGHCLTRPDQIALQGVSSSGGVFAPSIRYFEGR 83 Query: 65 FYMTTTNDTTRQNFYVWTDDIYGEWSEPIHVDQGGIDPDLYFEDSKTYFMSNGTDDYGVG 124 FYMTTTN TT+QNF+VWTDDIYGEWS+ I +DQ GIDP L+FE+ K+YFMSNG+D G+ Sbjct: 84 FYMTTTNSTTQQNFFVWTDDIYGEWSDHIFIDQDGIDPSLFFENGKSYFMSNGSDAEGIS 143 Query: 125 GIIQCEIEIETGRKLTPSRSVWQGSGGRYLESPHLYKIHGRYYLLAAEGGTEYGHMITYA 184 GI+QCEI I+TG+KL+PS+++WQGSGGRYLE PHLYKI YYL+AAEGGTEYGHM+TYA Sbjct: 144 GIVQCEIAIDTGKKLSPSKTIWQGSGGRYLEGPHLYKIKDYYYLVAAEGGTEYGHMVTYA 203 Query: 185 RGDSPSGPFEAYSNNPVLTNRNLGGYELQGVGHGDLVQDSDKNWWLIHLGFRQTGQYLTY 244 R SP GPFEAY +NPVLTNRNLGG+++QGVGHGDL++ D ++W++HLGFRQTG++ T+ Sbjct: 204 RSTSPYGPFEAYPSNPVLTNRNLGGFQIQGVGHGDLIEAPDGSFWMLHLGFRQTGRWTTF 263 Query: 245 HHLGREVFLTPVTFGDDGWFTAGHHGTTLMSFETERIADTIIQQEKKVFTFENTDWNLDW 304 HHLGREVFL+PV+F DDGWFT G GTT E +Q+ K +TF NTD+ DW Sbjct: 264 HHLGREVFLSPVSFHDDGWFTVGTDGTTSEYVEVPFTYK--VQEFKTEYTFCNTDFEKDW 321 Query: 305 CYLRHPVPGNYLLEPDKVRLKGTGVTLDAPFSPTFVGIRQKDFNGVISCRISLTNGEAGI 364 CY RHP NY L ++ L G ++LD SPTF+G+RQK+F I+C I + GEAGI Sbjct: 322 CYQRHPSRENYSLSQSQIILNGNSISLDDVDSPTFIGLRQKEFCCRINCDIEIDRGEAGI 381 Query: 365 TLYMDENHHYDLALRNHDHGYEIIERLNVGDIKSIEKAVELGHCNSATLVIKSAPTHYRF 424 T YMDENHHYDLA+ + G+ +I RL +G+IKSIE LG N A+ +I S Y F Sbjct: 382 TFYMDENHHYDLAISKYPEGFRVIVRLCIGNIKSIEAEYSLGDSNRASFIIDSNSQQYSF 441 Query: 425 YAQIDDSEILLGAAHTKYLSSEVAGGFTGVLIGMYATGESPDSHAEFTDFSCEY 478 Y + ++ I LG T+YLSSEVAGGFTGV+IG+YA + + A+F DF CEY Sbjct: 442 YVKSENEIIHLGTGLTRYLSSEVAGGFTGVIIGLYALDHNSINTAKFKDFKCEY 495 >B0MKI7.1 B0MKI7_9FIRM Putative uncharacterized protein (Fragment) Length = 501 Score = 546 bits (1408), Expect = e-153, Method: Compositional matrix adjust. Identities = 268/475 (56%), Positives = 346/475 (72%), Gaps = 9/475 (1%) Query: 5 YYLVCSSFQYFPGVPIFESKDLINWVQIGHCLTRTSQVQLDTVDSSGGVFAPTLRYNNGR 64 YYLV S+FQYFPGV +FES +L+NW QIG+ LTR QV LD + +SGGVFAPT+RYNNGR Sbjct: 30 YYLVTSTFQYFPGVALFESDNLVNWKQIGYVLTRPEQVMLDKIPASGGVFAPTIRYNNGR 89 Query: 65 FYMTTTNDTTRQNFYVWTDDIYGEWSEPIHVDQGGIDPDLYFEDSKTYFMSNGTDDYGVG 124 FYM TTNDTT +NFYV+TDDIYGEWS+PI V+QGGIDP LYFED +T+F+SNG DDYG G Sbjct: 90 FYMVTTNDTTHRNFYVYTDDIYGEWSDPIEVEQGGIDPSLYFEDGRTFFISNGQDDYGEG 149 Query: 125 GIIQCEIEIETGRKLTPSRSVWQGSGGRYLESPHLYKIHGRYYLLAAEGGTEYGHMITYA 184 G++QCEI+I TG+KL+ S+S+W+GSGGRYLESPH+YKI+GRYYL+AAEGGTEYGHMITYA Sbjct: 150 GVVQCEIDIATGKKLSHSKSIWKGSGGRYLESPHVYKINGRYYLMAAEGGTEYGHMITYA 209 Query: 185 RGDSPSGPFEAYSNNPVLTNRNLGGYELQGVGHGDLVQDSDKNWWLIHLGFRQTGQYLTY 244 D G + NNP+LTNRN Y +QG+GHGDL+QD + +W ++ LGFRQ G ++ + Sbjct: 210 VSDDIWGEYVTGDNNPILTNRNKAPYIIQGIGHGDLIQDKNGDWHILSLGFRQMGIWMPF 269 Query: 245 HHLGREVFLTPVTFGDDGWFTAGHHGTTLMSFETERIADTIIQQEKKVFTFENTDWNLDW 304 H LGREVFL+P F ++G AG GTT +E I Q + VFTF NTD +DW Sbjct: 270 HSLGREVFLSPAHFDENGRLFAGLDGTTDAQYE---IKGDFAQDKLPVFTFGNTDPAVDW 326 Query: 305 CYLRHPVPGNYLLEPDKVRLKGTGVTLDAPFSPTFVGIRQKDFNGVISCRISLT-NGEAG 363 CYLR P NY L DK L GT +TLD SPTF+ +RQ+DF+ + ++L NGE G Sbjct: 327 CYLRKHHPENYKLSADKYELCGTDLTLDDADSPTFIAMRQRDFDMELCVNVNLCGNGEGG 386 Query: 364 ITLYMDENHHYDLALRNHDHGYEIIERLNVGDIKSIEKAVELGHCNSATLVIKSAPTHYR 423 +T+YM EN HYD+AL+ G I +LN+G IK + V + + ++ATL++++ +Y Sbjct: 387 VTMYMCENEHYDIALKKTADGTFAILKLNIGGIKHEQNRVAV-NADNATLIVRADHYNYN 445 Query: 424 FYAQIDDSEILLGAAHTKYLSSEVAGGFTGVLIGMYATGESPDSHAEFTDFSCEY 478 F+ + D+E LG+ KYL+SEV+GGFTG + G+YA G + A+FT FSC Y Sbjct: 446 FFVKCGDTETHLGSGQVKYLTSEVSGGFTGTMTGLYAVGGT----AQFTGFSCAY 496 >B3JGQ3.1 B3JGQ3_9BACE Putative uncharacterized protein Length = 520 Score = 398 bits (1022), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/477 (45%), Positives = 292/477 (61%), Gaps = 15/477 (3%) Query: 5 YYLVCSSFQYFPGVPIFESKDLINWVQIGHCLTRTSQVQLDTVDSSGGVFAPTLRYNNGR 64 YYLV SSFQYFPGVP+F SKDL+NW QIG+CLTR SQ+ L + G+FAPT+RY+ G Sbjct: 44 YYLVNSSFQYFPGVPLFHSKDLVNWEQIGNCLTRESQLNLKGANGGSGIFAPTIRYHEGV 103 Query: 65 FYMTTTNDTTRQNFYVWTDDIYGEWSEPIHVDQGGIDPDLYFEDSKTYFMSNGTDDYGVG 124 FYM TTN + + NF V T D GEWSEP+ ++QGGIDP LYFE+ K Y +SN D Y Sbjct: 104 FYMITTNVSGKGNFLVHTTDPKGEWSEPVWLEQGGIDPSLYFENGKCYMVSN-PDGY--- 159 Query: 125 GIIQCEIEIETGRKLTPSRSVWQGSGGRYLESPHLYKIHGRYYLLAAEGGTEYGHMITYA 184 I CEI+ TG++LTPS+ +W G+GGRY E PH+YK G YYLL +EGGTE H IT A Sbjct: 160 -INLCEIDPMTGKQLTPSKKIWNGTGGRYPEGPHIYKKDGWYYLLISEGGTEVAHSITIA 218 Query: 185 RGDSPSGPFEAYSNNPVLTNRNLGG--YELQGVGHGDLVQDSDKNWWLIHLGFRQTGQYL 242 R GP+ NP+LT+ G +QG GH DLV+ +D +WW++ L +R + Sbjct: 219 RSRYIDGPYVRNPANPILTHACQAGETNPIQGTGHADLVEGTDGSWWMVCLAYRIMPGF- 277 Query: 243 TYHHLGREVFLTPVTFGDDGWFTAGHHGTTLMSFETERIADTIIQQEKKVFTFENTDWNL 302 +H LGRE +L PV + D W +GT + + ++Q+ + TFEN + Sbjct: 278 -HHTLGRETYLAPVRWDKDAWPVVNGNGTIQLDMNVPTLPLQTVKQKPETITFENKQLSP 336 Query: 303 DWCYLRHPVPGNYLLEPDKVRLKGTGVTLDAPFSPTFVGIRQKDFNGVISCRISLTNG-- 360 +W YL++P NY + +RLK T V+L+ SPTFV IRQ+ FN ++ + L N Sbjct: 337 EWMYLQNPNMQNYEFKNGNLRLKATPVSLNEQKSPTFVAIRQEHFNMEVATSLELKNAQA 396 Query: 361 --EAGITLYMDENHHYDLALR-NHDHGYEIIERLNVGDIKSIEKAVELGHCNSATLVIKS 417 EAGI++YM+ + HYDL +R N D ++ R +G+++ IEK + L + L IKS Sbjct: 397 NDEAGISVYMEYHSHYDLFVRQNKDKSRSVVLRYKLGELEHIEKEMPLNSKGNIELNIKS 456 Query: 418 APTHYRFYAQIDDSEILLGAAHTKYLSSEVAGGFTGVLIGMYATGESPDSHAEFTDF 474 Y F + LG +T+YLSSE AGGFTGV++G+Y+ S S A + DF Sbjct: 457 DINFYYFGYTENGIYHELGKMNTRYLSSETAGGFTGVVLGLYSVSASTQSKA-YADF 512 >B3KJH6.1 B3KJH6_9BACI Glycoside hydrolase family 43 Length = 506 Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust. Identities = 216/485 (44%), Positives = 295/485 (60%), Gaps = 13/485 (2%) Query: 1 VANTYYLVCSSFQYFPGVPIFESKDLINWVQIGHCLTRTSQVQLDTVDSSGGVFAPTLRY 60 V YYLV S+F+YFPGVPIF SKDL+NW QIGHCLT Q+ L SSGG++APTLRY Sbjct: 20 VGEDYYLVTSTFEYFPGVPIFHSKDLVNWKQIGHCLTSEKQLPLKKAGSSGGIYAPTLRY 79 Query: 61 NNGRFYMTTTNDTTRQNFYVWTDDIYGEWSEPIHVDQGGIDPDLYFEDS-KTYFMSNGTD 119 + G +YMTTTN + NFYV + D G WS+PI V Q GIDP L F+D + YF + Sbjct: 80 HEGWYYMTTTNVSGIGNFYVKSTDPAGPWSDPIPVAQQGIDPSLLFDDDGRVYFQTACYG 139 Query: 120 DYGVGGIIQCEIEIETGRKLTPSRSVWQGSGGRYLESPHLYKIHGRYYLLAAEGGTEYGH 179 D G GI QCEI+I + +KLT SR +W+G+GG E+PHLYKIHG YYL+ AEGGTEYGH Sbjct: 140 DEGE-GIYQCEIDIASSKKLTESRLIWRGTGGASPEAPHLYKIHGLYYLMIAEGGTEYGH 198 Query: 180 MITYARGDSPSGPFEAYSNNPVLTNRNLGGYELQGVGHGDLVQDSDKNWWLIHLGFRQTG 239 M+T +R P GPFE +NP+L++R+ + GH DLVQ D WW + LG R Sbjct: 199 MVTVSRSRHPYGPFEPCPHNPILSHRSRRS-PIHATGHADLVQAQDGTWWAVFLGIRPV- 256 Query: 240 QYLTYHHLGREVFLTPVTFGDDGWFTAGHHGTTLMSFETERIADTIIQQEKKVFTFENTD 299 Y HHLGRE +L PVT+ DGW + G G ++ ++ + + F++ Sbjct: 257 SYPMRHHLGRETYLAPVTWTADGWPSIGFKGRVEQVMDSPQLPECRWPAKPSRDDFDHAS 316 Query: 300 WNLDWCYLRHPVPGNYLLE--PDKVRLKGTGVTLDAPFSPTFVGIRQKDFNGVISCRISL 357 LDW +LR+P+PG++ L+ P + L+G +L+ SP FVG R + F+ IS + Sbjct: 317 LGLDWVFLRNPLPGSWSLQEHPGYLMLRGNPSSLNDAASPAFVGRRLRHFSCNISAALDF 376 Query: 358 TNG----EAGITLYMDENHHYDLALRNHDHGYEIIERLNVGDIKSIEKAVELGHCNSATL 413 EAG+T++M+E +HYDLA++ + I+ R VG + S+E L Sbjct: 377 EPANEGEEAGLTVFMNERYHYDLAVKLINGEKTIVFRRTVGSL-SVEHTSRCPE-GPVVL 434 Query: 414 VIKSAPTHYRFYAQIDDSEIL-LGAAHTKYLSSEVAGGFTGVLIGMYATGESPDSHAEFT 472 I++ P H+RF SE+L +G+ T L++EVAGGFTG++I MYA G++ + A F Sbjct: 435 RIEAMPEHFRFSMGQSSSEVLNMGSGETHLLATEVAGGFTGLMIAMYAFGDNGTTPALFD 494 Query: 473 DFSCE 477 F E Sbjct: 495 WFDYE 499 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.139 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,333,111,670 Number of extensions: 157335285 Number of successful extensions: 280213 Number of sequences better than 1.0e-05: 554 Number of HSP's gapped: 278623 Number of HSP's successfully gapped: 572 Length of query: 479 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 339 Effective length of database: 1,741,754,103 Effective search space: 590454640917 Effective search space used: 590454640917 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)