BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0579.0021.p (248 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DET2.1 B1DET2_9BACL Methionine aminopeptidase EC=3.4.11.18 482 e-134 B1DD16.1 B1DD16_9BACL Methionine aminopeptidase EC=3.4.11.18 327 4e-88 B3KCY5.1 B3KCY5_9BACI Methionine aminopeptidase EC=3.4.11.18 318 2e-85 C0ZGZ7.1 C0ZGZ7_BREBN Methionine aminopeptidase EC=3.4.11.18 313 6e-84 B3KDS0.1 B3KDS0_9BACI Methionine aminopeptidase EC=3.4.11.18 305 2e-81 >B1DET2.1 B1DET2_9BACL Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust. Identities = 232/248 (93%), Positives = 240/248 (96%) Query: 1 MVILKSKHEIEAIRKACQVVAECHRTIAPLIKPGITTNEIERIFEDIMLKHGAKPYQRGY 60 MVILKSKHEIEAIRKACQVVAECHRTIAPLIKPGITTNEIERIFE+IMLKHGAKPYQ+GY Sbjct: 1 MVILKSKHEIEAIRKACQVVAECHRTIAPLIKPGITTNEIERIFEEIMLKHGAKPYQKGY 60 Query: 61 KGYQYATCASVNDVIAHGFPSNKPLEEGDIVTIDTVAELDGWLGDSAWSYAVGEISPMAK 120 KGY YATCAS NDVIAHGFPSNKPL EGDIVTIDTVAELDGWLGDSAWSYAVG+ISP A+ Sbjct: 61 KGYPYATCASANDVIAHGFPSNKPLVEGDIVTIDTVAELDGWLGDSAWSYAVGQISPTAE 120 Query: 121 KLIRVTKECLDLGIAQALPGNRLGDVTSAIQQHAESHGFGVVRDLLAHGIGRDLHEEPTY 180 KL+RVTKECLDLGI QA PGNRLGDVTSAIQ+HAESHGFGVVR+LLAHGIGRDLHEEPTY Sbjct: 121 KLMRVTKECLDLGIVQAQPGNRLGDVTSAIQRHAESHGFGVVRELLAHGIGRDLHEEPTY 180 Query: 181 MHVGKPGKGPRIKEGMVFTIEPMITEGTYYMTIDPDGWTARTLDRKLAAQYEHTIAITAE 240 MHVGKPGKG RIKEGMVFTIEPMITEGTY+MTIDPDGWTARTLD KLAAQYEHTIAITAE Sbjct: 181 MHVGKPGKGVRIKEGMVFTIEPMITEGTYFMTIDPDGWTARTLDNKLAAQYEHTIAITAE 240 Query: 241 GPQILTAQ 248 GPQILTAQ Sbjct: 241 GPQILTAQ 248 >B1DD16.1 B1DD16_9BACL Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 327 bits (839), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 155/248 (62%), Positives = 193/248 (77%) Query: 1 MVILKSKHEIEAIRKACQVVAECHRTIAPLIKPGITTNEIERIFEDIMLKHGAKPYQRGY 60 M+I+K++ EI + +A +++AE HR IA LI PGITT+EI++ E +M ++GA P Q+GY Sbjct: 1 MIIIKTEAEINRMHEAGKILAEIHRQIAKLIAPGITTHEIDQFAEKLMKQYGATPEQKGY 60 Query: 61 KGYQYATCASVNDVIAHGFPSNKPLEEGDIVTIDTVAELDGWLGDSAWSYAVGEISPMAK 120 KGYQYATCAS+NDVI HGFP + L++GDIVTID V L+GWL DSAWSY VG ++ A Sbjct: 61 KGYQYATCASINDVICHGFPKKEKLKDGDIVTIDMVVNLNGWLADSAWSYPVGNVTEEAD 120 Query: 121 KLIRVTKECLDLGIAQALPGNRLGDVTSAIQQHAESHGFGVVRDLLAHGIGRDLHEEPTY 180 +L+RVTKE L GI +A+ GNR+GDV+ AIQ +AE+ GF VVRD + HGIG+++HE+P Sbjct: 121 RLLRVTKESLYKGIEKAVAGNRIGDVSHAIQAYAEAEGFSVVRDFIGHGIGQEMHEDPQV 180 Query: 181 MHVGKPGKGPRIKEGMVFTIEPMITEGTYYMTIDPDGWTARTLDRKLAAQYEHTIAITAE 240 H G P KGPRIKEGMVFTIEPM+ GTY M ID DGWTART D KL+AQYEHTIAITA Sbjct: 181 PHYGPPNKGPRIKEGMVFTIEPMLNVGTYQMKIDADGWTARTRDGKLSAQYEHTIAITAN 240 Query: 241 GPQILTAQ 248 GP ILT Q Sbjct: 241 GPVILTEQ 248 >B3KCY5.1 B3KCY5_9BACI Methionine aminopeptidase EC=3.4.11.18 Length = 236 Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 150/236 (63%), Positives = 181/236 (76%) Query: 13 IRKACQVVAECHRTIAPLIKPGITTNEIERIFEDIMLKHGAKPYQRGYKGYQYATCASVN 72 ++ A Q+VA+C+R +A LI+PGITT EI + K G K + +GY G+ TC SVN Sbjct: 1 MKPASQIVADCYREVAKLIEPGITTREINDFVARHITKLGGKQFTKGYNGFPAETCTSVN 60 Query: 73 DVIAHGFPSNKPLEEGDIVTIDTVAELDGWLGDSAWSYAVGEISPMAKKLIRVTKECLDL 132 DV+AHG PSN+ L +GD++ +D V E GW GDS W Y VG I P A+ +++V KECLDL Sbjct: 61 DVVAHGIPSNRALMDGDLLKLDIVVEYGGWFGDSCWCYPVGNIRPEAQNIMKVAKECLDL 120 Query: 133 GIAQALPGNRLGDVTSAIQQHAESHGFGVVRDLLAHGIGRDLHEEPTYMHVGKPGKGPRI 192 GIA+ALPG RLGD+TSAIQQHAE++GF VVRDLLAHGIGR LHEEP + HVG GKG R+ Sbjct: 121 GIARALPGGRLGDITSAIQQHAEANGFSVVRDLLAHGIGRSLHEEPNFEHVGVAGKGIRL 180 Query: 193 KEGMVFTIEPMITEGTYYMTIDPDGWTARTLDRKLAAQYEHTIAITAEGPQILTAQ 248 KEGMVFTIEPMI EGT+ +TID D WTART D KL+AQYEHTIAIT +GP ILTAQ Sbjct: 181 KEGMVFTIEPMINEGTFRITIDDDQWTARTADGKLSAQYEHTIAITKDGPLILTAQ 236 >C0ZGZ7.1 C0ZGZ7_BREBN Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 313 bits (803), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 147/248 (59%), Positives = 187/248 (75%) Query: 1 MVILKSKHEIEAIRKACQVVAECHRTIAPLIKPGITTNEIERIFEDIMLKHGAKPYQRGY 60 M+ILK+ EIE + A +V+A CHR IA +I+PGI+T EI++ E+ + K+GA P Q+G+ Sbjct: 1 MIILKTPEEIELMHAAGKVLAACHREIAKMIRPGISTWEIDQFVEEFLAKNGATPEQKGF 60 Query: 61 KGYQYATCASVNDVIAHGFPSNKPLEEGDIVTIDTVAELDGWLGDSAWSYAVGEISPMAK 120 GY YATC SVNDVI HGFP +PL +GDIVTID V +GWL DSAWSY VG +SP AK Sbjct: 61 HGYPYATCGSVNDVICHGFPKKEPLRDGDIVTIDMVVRKNGWLADSAWSYEVGTVSPEAK 120 Query: 121 KLIRVTKECLDLGIAQALPGNRLGDVTSAIQQHAESHGFGVVRDLLAHGIGRDLHEEPTY 180 +L+ VT++ L LGI QA+ GNR+GD++ AIQ +A+ G+ VVRD HGIG+++HEEP Sbjct: 121 RLLEVTEKSLYLGIEQAVVGNRIGDISHAIQTYAQEQGYSVVRDFTGHGIGQEMHEEPFV 180 Query: 181 MHVGKPGKGPRIKEGMVFTIEPMITEGTYYMTIDPDGWTARTLDRKLAAQYEHTIAITAE 240 H G PG+G R+KEGMV TIEPM+ GTY+ +D DGWTART D KL+AQYEHT+AITA Sbjct: 181 PHFGPPGRGQRLKEGMVITIEPMLNIGTYHSKVDEDGWTARTRDGKLSAQYEHTLAITAN 240 Query: 241 GPQILTAQ 248 GP ILT Q Sbjct: 241 GPVILTKQ 248 >B3KDS0.1 B3KDS0_9BACI Methionine aminopeptidase EC=3.4.11.18 Length = 248 Score = 305 bits (782), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 144/248 (58%), Positives = 184/248 (74%) Query: 1 MVILKSKHEIEAIRKACQVVAECHRTIAPLIKPGITTNEIERIFEDIMLKHGAKPYQRGY 60 M+ILK++ +I + KA ++AECHR IA +IKPG+TT EI++ E + + GA P Q+GY Sbjct: 1 MIILKTQEQIAKMNKAGDILAECHRQIANMIKPGVTTLEIDQFVERFLAERGATPEQKGY 60 Query: 61 KGYQYATCASVNDVIAHGFPSNKPLEEGDIVTIDTVAELDGWLGDSAWSYAVGEISPMAK 120 GY +ATCASVNDVI HGFPS++PL++GDIVTID V + DGWL DSAWSY VG +S A+ Sbjct: 61 HGYPFATCASVNDVICHGFPSHEPLKDGDIVTIDMVVKYDGWLADSAWSYPVGNVSEEAQ 120 Query: 121 KLIRVTKECLDLGIAQALPGNRLGDVTSAIQQHAESHGFGVVRDLLAHGIGRDLHEEPTY 180 L+ VTK+ L LGI QA+ GNR+GD++ AIQ +AE+ VVR + H IG ++HEEP Sbjct: 121 HLLDVTKKALYLGIEQAVIGNRIGDISHAIQSYAEAQNLSVVRHFVGHAIGENMHEEPQV 180 Query: 181 MHVGKPGKGPRIKEGMVFTIEPMITEGTYYMTIDPDGWTARTLDRKLAAQYEHTIAITAE 240 H G P +G R+KEGMV TIEPM+ GTY ID DGWTART+D K +AQYEHT+AIT + Sbjct: 181 PHYGPPNRGTRLKEGMVITIEPMLNLGTYQCKIDSDGWTARTVDGKWSAQYEHTLAITKD 240 Query: 241 GPQILTAQ 248 GP ILT Q Sbjct: 241 GPVILTEQ 248 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,520,366,450 Number of extensions: 63993967 Number of successful extensions: 166671 Number of sequences better than 1.0e-05: 4359 Number of HSP's gapped: 160920 Number of HSP's successfully gapped: 4369 Length of query: 248 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 116 Effective length of database: 1,817,122,223 Effective search space: 210786177868 Effective search space used: 210786177868 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 129 (54.3 bits)