BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0579.0012.p (626 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KF32.1 B3KF32_9BACI Putative uncharacterized protein 971 0.0 B1D7S1.1 B1D7S1_9BACL Putative uncharacterized protein 493 e-137 C1F598.1 C1F598_ACIC5 Tat pathway signal sequence domain protein 312 7e-83 Q01RL9.1 Q01RL9_SOLUE Putative uncharacterized protein 285 1e-74 Q029P0.1 Q029P0_SOLUE Putative uncharacterized protein 283 4e-74 >B3KF32.1 B3KF32_9BACI Putative uncharacterized protein Length = 622 Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/619 (70%), Positives = 517/619 (83%) Query: 7 MIELKGKHVVVHDGDLKRREEANRRYLMKLTNDNLLFNYKIEAGRYHGRDIPHDAHGGWE 66 M L+GK V++ + +L RRE ANR YLMKL + +LLFNY +EAGR+HGR IP AHGGWE Sbjct: 1 MKALRGKQVILKEQELIRRERANRSYLMKLDSGHLLFNYHLEAGRFHGRTIPEGAHGGWE 60 Query: 67 TPVCQIRGHFLGHWLSAAAMRFHETGDLELKVKADLIIDELAECQKDNGGQWVGPIPEKY 126 TPVCQ+RGHFLGHWLS AA+ + E+GD+ELK K D I+ EL ECQ+DNGGQWVGPIPEKY Sbjct: 61 TPVCQLRGHFLGHWLSGAALHYEESGDIELKAKLDAIVHELHECQRDNGGQWVGPIPEKY 120 Query: 127 LHWIAKGKGIWAPQYNIHKLFMGLVDMYQFTGSQKALDVADRFADWFVEWSSTFTRENFD 186 LHWIA GK IWAPQYN HK+ MGLVD +Q+ G+++ALD+ DRFADWFVEWS TFTRE FD Sbjct: 121 LHWIASGKSIWAPQYNCHKILMGLVDAWQYAGNRQALDIVDRFADWFVEWSGTFTREQFD 180 Query: 187 DILDMETGGMLEAWADLLHFTGNDKYSTLLERYFRSRLFHPLLENKDPLTNMHANTTIPE 246 DILD+ETGGMLE WADLLH TG DKY LL+RY+RSRLF PLLE KDPLTNMHANTTIPE Sbjct: 181 DILDVETGGMLEVWADLLHITGADKYRVLLDRYYRSRLFQPLLEGKDPLTNMHANTTIPE 240 Query: 247 VFGCARAYEVTGEPRWMDIVTAYWKCAVTERGTLATGGNTAGEVWMPKMKIKARLGDKNQ 306 V GCARAYEVTG+ RW+ IV AYW CAVTERG+LATGG TAGEVWMPKMK+KARLGDKNQ Sbjct: 241 VLGCARAYEVTGDDRWLSIVQAYWNCAVTERGSLATGGQTAGEVWMPKMKMKARLGDKNQ 300 Query: 307 EHCTVYNMIRLAEFLFRHTSDPAYAQYIEYNMYNGIMAQAYYQEYHLTGNKHGNPSSGLL 366 EHCTVYNMIRLA+FLFR + DP YAQYIEYN+YNGIMAQAYYQEY LTG++H P +GLL Sbjct: 301 EHCTVYNMIRLADFLFRQSGDPTYAQYIEYNLYNGIMAQAYYQEYGLTGSQHNYPRTGLL 360 Query: 367 TYFLPMKAGLRKDWSSETDSFFCCHGTMVQANAALNRGIYYQDHNDVFVCQYFHSELTTE 426 TYFLPMKAGLRK+WS+ETDSFFCCHGTMVQANAA N GIYYQD + V++ QYF SEL Sbjct: 361 TYFLPMKAGLRKEWSTETDSFFCCHGTMVQANAAWNMGIYYQDGDIVYISQYFDSELDAS 420 Query: 427 INGENVRINQSQDHMSGSMLNSSNTAGQQELNEITALHENLPNYKKYDFVVHTGAPNEFA 486 I G +RI Q+QD MSGS+L+SSNTAG Q +N+ +++EN+P ++KYDF+V AP F Sbjct: 421 IAGTLIRIVQTQDKMSGSLLSSSNTAGYQAINDTASINENIPTFRKYDFIVSAAAPTTFT 480 Query: 487 IHFRIPDWIMSEAVIYVNDQLHGKSADHTAFYTILRNWQDGDRISIILPVGIRFIPLPDD 546 + FRIP+WIM+ A +YVND L G + D FY I R W++GD +SI+LP+GIRF+PLPDD Sbjct: 481 LRFRIPEWIMAGASVYVNDVLQGTTLDSENFYDIHRAWKEGDTVSIMLPIGIRFVPLPDD 540 Query: 547 EQTGAFRFGPEVLAGICENERILFTQKDDVASELIMENEREWGTWRYFFKTANQDPGIQL 606 E+TGAFR+GPEVLAG+CE+E+ L+ + +D+AS + ENEREWG+WRYFFKT NQ+P I Sbjct: 541 ERTGAFRYGPEVLAGLCESEQQLYMRDEDIASAIENENEREWGSWRYFFKTVNQEPAITF 600 Query: 607 RRIRDIGYEPYQVYFTVKK 625 +RIRDIGYEPYQ+YF V + Sbjct: 601 KRIRDIGYEPYQIYFKVTR 619 >B1D7S1.1 B1D7S1_9BACL Putative uncharacterized protein Length = 626 Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/627 (42%), Positives = 366/627 (58%), Gaps = 32/627 (5%) Query: 15 VVVHDGDLKRREEANRRYLMKLTNDNLLFNYKIEAG--RYHGR-----------DIPHDA 61 V + DG K R N+ Y+M LTN+NLL ++ +EAG Y G + P Sbjct: 9 VKLGDGPFKARFNLNKNYIMSLTNENLLRSFYLEAGLWSYSGNGGTTSATTTSMNGPEHW 68 Query: 62 HGGWETPVCQIRGHFLGHWLSAAAMRFHETGDLELKVKADLIIDELAECQKDNGGQWVGP 121 H GWE+ C++RGH +GHWLSAAA + +T D +K KAD I++EL CQ+ NGG+W+ Sbjct: 69 HWGWESVTCELRGHIMGHWLSAAAQIYAQTSDALVKAKADYIVEELVRCQEANGGEWLAA 128 Query: 122 IPEKYLHWIAKGKGIWAPQYNIHKLFMGLVDMYQFTGSQKALDVADRFADWFVEWSSTFT 181 PE Y+H IAKG +WAP Y IHKL MGL DMY G+++AL V ADWF +W+ F+ Sbjct: 129 FPESYMHRIAKGSFVWAPHYTIHKLLMGLYDMYAIAGNEQALRVMRGIADWFYKWTGNFS 188 Query: 182 RENFDDILDMETGGMLEAWADLLHFTGNDKYSTLLERYFRSRLFHPLLENKDPLTNMHAN 241 +E D++LD+ETGGMLE WADL T DK+ L++RY R R F LLE +D LTN HAN Sbjct: 189 QEEMDELLDLETGGMLEVWADLYGITKEDKHLNLVKRYDRRRFFDALLEGQDVLTNKHAN 248 Query: 242 TTIPEVFGCARAYEVTGEPRWMDIVTAYWKCAVTERGTLATGGNTAGEVWMPKMKIKARL 301 T IPE+ G ARA+EVTGE R+ IV A+W+ AVT+RG +ATG GE+WMP+ ++ +RL Sbjct: 249 TQIPEILGAARAWEVTGEDRYRRIVEAFWRLAVTDRGYVATGAGDNGELWMPRGEMGSRL 308 Query: 302 GDKNQEHCTVYNMIRLAEFLFRHTSDPAYAQYIEYNMYNGIMAQAYYQEYHLTGNKHGNP 361 G QEHC YNM+RLA L R T DPAYA Y E YNG++A ++HG+ Sbjct: 309 G-VGQEHCCNYNMMRLAHVLLRWTGDPAYADYWERRFYNGVLA-----------HQHGD- 355 Query: 362 SSGLLTYFLPMKAGLRKDWSSETDSFFCCHGTMVQANAALNRGIYYQDHNDVFVCQYFHS 421 +G+++YFL M AG +K W + T F+CCHGT++QANAA I+ +D N + +CQ+ S Sbjct: 356 -TGMISYFLGMGAGSKKSWGTPTQHFWCCHGTLMQANAAYESQIFMEDENGIAICQWIPS 414 Query: 422 ELTTEINGENVRINQSQDHMSGSM-LNSSNTAGQQELNEI--TALHENLPNYKKYDFVVH 478 EL N+RI QD G LN+ + G + ++ + E+ P+ Y + Sbjct: 415 ELQLSRADGNLRIRIEQDGQYGVYPLNNWSVKGMTAITKVDMPPIPEHRPDRFVYTVTIG 474 Query: 479 TGAPNEFAIHFRIPDWIMSEAVIYVN-DQLHGKSADHTAFYTILRNWQDGDRISIILPVG 537 + F + R+P W+ VI VN Q+ A +++ I R W +GD +++ LP Sbjct: 475 LEHASTFELKLRLPWWLSGPPVIRVNGSQVEQNEAKPSSYTAIAREWSNGDVVTVELPKT 534 Query: 538 IRFIPLPDDEQTGAFRFGPEVLAGICENERILFTQKDDVASELIMENEREWGTWRY-FFK 596 + PLP D T AF GP V+AG+ E ER L+ S L + ER W ++ Sbjct: 535 LTMEPLPGDTGTYAFFDGPIVMAGLTEEERTLYGDILQPDSLLTPDRERNHSWWNPGCYR 594 Query: 597 TANQDPGIQLRRIRDIGYEPYQVYFTV 623 T D G + + +I E Y VYF V Sbjct: 595 TKELDRGFRFIPLYEIKDEAYSVYFPV 621 >C1F598.1 C1F598_ACIC5 Tat pathway signal sequence domain protein Length = 644 Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 196/632 (31%), Positives = 299/632 (47%), Gaps = 72/632 (11%) Query: 14 HVVVHDGDLKRREEANRRYLMKLTNDNLLFNYKIEAGRYHGRDIPHDAH--GGWETPVCQ 71 V + DG LK E NR+YL + ND LL +++ AG +P A GGWE P C+ Sbjct: 62 QVRMRDGVLKNALEINRQYLYLVPNDRLLHTFRLTAG------LPTSAEPLGGWEAPDCE 115 Query: 72 IRGHFLG-HWLSAAAMRFHETGDLELKVKADLIIDELAECQKDNGGQWVGPIPEKYLHWI 130 +RGHF G H+LSA A+ + TGD ++K K D ++ ELA+CQ+ +G ++ P + + Sbjct: 116 LRGHFAGGHYLSACALMYASTGDEKIKAKGDALVAELAKCQQPDG--YLSAFPASFFDRL 173 Query: 131 AKGKGIWAPQYNIHKLFMGLVDMYQFTGSQKALDVADRFADWFVEWSSTFTRENFDDILD 190 + +WAP Y HK+ G +DMY TG+Q+AL+ R ADW +E++ + + +L Sbjct: 174 RHYQKVWAPFYTYHKIMAGHLDMYVHTGNQQALETCKRMADWAIEYTKPIPADQWQRMLL 233 Query: 191 METGGMLEAWADLLHFTGNDKYSTLLERYFRSRLFHPLLENKDPLTNMHANTTIPEVFGC 250 +E GGM E +L TG KY L R+ +F PL + +D L HANT IP+V G Sbjct: 234 VEQGGMNEVSFNLYAVTGEKKYRDLGFRFEHKLIFDPLAKREDHLAGNHANTNIPKVIGA 293 Query: 251 ARAYEVTGEPRWMDIVTAYWKCAVTERGTLATGGNTAGEVWMPKMKIKARLGDKNQEHCT 310 AR YEV + R+ I +W AVT + ATGG + GE W + LG +E C Sbjct: 294 ARGYEVADDKRYHTIAEFFWG-AVTSQHAYATGGTSDGEFWHKPGTLAEHLGPAAEECCC 352 Query: 311 VYNMIRLAEFLFRHTSDPAYAQYIEYNMYNGIMAQAYYQEYHLTGNKHGNPSSGLLTYFL 370 YNM++L+ L+ T DP Y E MYN + G+L Y++ Sbjct: 353 SYNMMKLSRHLYGWTGDPRIFDYYERLMYNVRIGT--------------QDPKGMLMYYV 398 Query: 371 PMKAGLRKDWSSETDSFFCCHGTMVQANAALNRGIYYQDHNDVFVCQYFHSELTTEINGE 430 +K G K + + D+F+CC GT V+ + +N IY+ D +++V + SE+ + + Sbjct: 399 SLKPGYWKTFGTPFDAFWCCTGTGVEEYSKVNDSIYFHDAKNIYVNLFAGSEV--QWPEK 456 Query: 431 NVRINQSQDHMSGSMLNSSNTAGQQELNEITALHENLPNYKKYDFVVHTGAPNEFAIHFR 490 NV + Q N P + V P+ F + R Sbjct: 457 NVSLVQET---------------------------NFPLEEATTLTVRAQKPSAFGLKIR 489 Query: 491 IPDWIMSEAVIYVNDQLHGKSADHTAFYTILRNWQDGDRISIILPVGIRFIPLPDDEQTG 550 +P W + I++N Q A ++ T+ R W DGD I + +P+ + P+PD Sbjct: 490 VPYWATNGFTIHINGQPQSVEAKPESYATLHRTWHDGDTIKVSMPMSLHISPIPDSPDVQ 549 Query: 551 AFRFGPEVLAGICENERIL----------FTQKDDVASELIMENEREWGTW-------RY 593 A +GP VLAG + F+ K++ ++ + G Sbjct: 550 AVLYGPLVLAGEMGRHGLTEKQIYGDSGPFSDKENYPMPELLTASGQAGEAIERLPGGEL 609 Query: 594 FFKTANQDPGIQLRRIRDIGYEPYQVYFTVKK 625 F TANQ + L+ + I E Y VY+ V + Sbjct: 610 RFATANQQQTMHLKPLYQIMDERYTVYWKVNR 641 >Q01RL9.1 Q01RL9_SOLUE Putative uncharacterized protein Length = 675 Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 181/601 (30%), Positives = 286/601 (47%), Gaps = 59/601 (9%) Query: 26 EEANRRYLMKLTNDNLLFNYKIEAGRYHGRDIPHDAHGGWETP-----VCQIRGHFLGHW 80 +E NR Y+ +L D LL ++ AG G P GGWE P ++RGHF GH+ Sbjct: 82 QEWNRGYMERLAADRLLHTFRANAGLPVGSAKPL---GGWEQPENGQRSSELRGHFAGHF 138 Query: 81 LSAAAMRFHETGDLELKVKADLIIDELAECQKDNGGQWVGPIPEKYLHWIAKGKGIWAPQ 140 LSA+A + GD + K D ++ E+A CQ+ GG+++ P + + KG+ +WAP Sbjct: 139 LSASA-QLSANGDKNAQSKGDFMVAEMARCQQKLGGKYLSAFPTTWWDRLGKGERVWAPF 197 Query: 141 YNIHKLFMGLVDMYQFTGSQKALDVADRFADWFVEWSSTFTRENFDDILDMETGGMLEAW 200 Y IHK+ G+ DMY G+Q+AL+V + A W EW++ E+ IL +E GG+ E Sbjct: 198 YTIHKIMAGMFDMYSLAGNQQALEVLEGMAAWADEWTAPKAAEHMQQILTIEFGGIAETL 257 Query: 201 ADLLHFTGNDKYSTLLERYFRSRLFHPLLENKDPLTNMHANTTIPEVFGCARAYEVTGEP 260 L T D++ + +R+ + +PL +D L +H NT IP+V AR Y+++G+ Sbjct: 258 YRLAAATDQDRWGRVGDRFQKKSFLNPLAARRDELRGLHVNTHIPQVMAAARRYDLSGDM 317 Query: 261 RWMDIVTAYWKCAVTERGTLATGGNTAGEVWMP---KMKIKARLGDKNQEHCTVYNMIRL 317 R+ D+ ++ R T TGG + E W+ ++ + +L E C YNM++L Sbjct: 318 RFHDVADYFFSEVAGAR-TYVTGGTSNAEAWLAPPRRLATELKLSVNTAECCCAYNMLKL 376 Query: 318 AEFLFRHTSDPAYAQYIEYNMYNGIMAQAYYQEYHLTGNKHGNPSSGLLTYFLPMKAGLR 377 A L+ P+Y Y E+ + N H G P GL Y+L + G Sbjct: 377 ARHLYSWDPKPSYFDYYEHLLLN-----------HRIGTIR--PKVGLTQYYLSLTPGAW 423 Query: 378 KDWSSETDSFFCCHGTMVQANAALNRGIYYQDHNDVFVCQYFHSELTTEINGENVRINQS 437 K +++E +F+CC G+ V+ + LN IY++D ++V + SEL G +R Sbjct: 424 KTFNTEDQTFWCCTGSGVEEYSKLNDSIYWRDGEGLYVNLFISSELDWAERGFKLR---- 479 Query: 438 QDHMSGSMLNSSNTAGQQELNEITALHENLPNYKKYDFVVHTGAPNEFAIHFRIPDWIMS 497 A Q + TAL V + AI RIP W+ S Sbjct: 480 -------------QATQYPASPSTAL------------TVTAARAGDLAIRLRIPGWLQS 514 Query: 498 EAVIYVNDQLHGKSADHTAFYTILRNWQDGDRISIILPVGIRFIPLPDDEQTGAFRFGPE 557 + +N + SA ++ + RNW+ GDRI + LP+ + +PDD AF +GP Sbjct: 515 APSVKLNGKALDASAAPGSYLVLKRNWKVGDRIDMELPMRLHVQAMPDDPAMQAFLYGPL 574 Query: 558 VLAGICENERILFTQKDDVASELIM--ENEREWGTWRYFFKTANQDPGIQLRRIRDIGYE 615 VLAG E + T+ + L + N ++G+ T P I++ R +G + Sbjct: 575 VLAGDLGGEGL--TEAHIIGPNLRVGAPNTEQFGSPLGPTNTTPPVPAIEIPTFRALGAD 632 Query: 616 P 616 P Sbjct: 633 P 633 >Q029P0.1 Q029P0_SOLUE Putative uncharacterized protein Length = 664 Score = 283 bits (724), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 184/577 (31%), Positives = 279/577 (48%), Gaps = 75/577 (12%) Query: 6 AMIELKGKHVVVHDGDLKRREEANRRYLMKLTNDNLLFNYKIEAGRYHGRDIPHDAH--G 63 A+ V + G E NR Y+ +L D LL +++ AG +P A G Sbjct: 63 ALQPFPMSQVRLLPGPFLDAAEWNRGYMNRLPADRLLHAFRLNAG------LPSSAQPLG 116 Query: 64 GWE-----TPVCQI------RGHFLGHWLSAAAMRFHETGDLELKVKADLIIDELAECQK 112 GWE TP +I RGHF+GH+LSA+A + GD + K KAD I+ ELA+CQ+ Sbjct: 117 GWEIYVEPTPGKRINSEGELRGHFVGHFLSASAQLYASMGDKDAKAKADYIVAELAKCQQ 176 Query: 113 DNGGQ-WVGPIPEKYLHWIAKGKGIWAPQYNIHKLFMGLVDMYQFTGSQKALDVADRFAD 171 G ++ P ++ + K +WAP Y IHK+ G+ DMY G+Q+AL V + ++ Sbjct: 177 KLGPSGYLSAFPIEWFDRLDARKPVWAPFYTIHKIMAGMFDMYTLAGNQQALQVLEGMSN 236 Query: 172 WFVEWSSTFTRENFDDILDMETGGMLEAWADLLHFTGNDKYSTLLERYFRSRLFHPLLEN 231 W EW+++ + + DIL E GGM E +L TGND+++ +R+ + F+PL Sbjct: 237 WADEWTASKSEAHMQDILRTEYGGMNEVLYNLAAVTGNDRWAKAGDRFTKKEFFNPLALR 296 Query: 232 KDPLTNMHANTTIPEVFGCARAYEVTGEPRWMDIVTAYWKCAVTERGTLATGGNTAGEVW 291 D LT +H NT IP+V G A YE++ + R+ D+ +W VT R + T G + GE W Sbjct: 297 NDALTGLHVNTHIPQVIGAAARYEISSDMRFHDVADYFWYEVVTAR-SYVTEGTSNGEGW 355 Query: 292 MPKMKIKA---RLGDKNQEHCTVYNMIRLAEFLFRHTSDPAYAQYIEYNMYNGIMAQAYY 348 + + ++ A + E C YNM++L L+ DPAY Y E ++N Sbjct: 356 LTQPRMLAAELKRSVATAECCCSYNMLKLTRHLYGWKPDPAYFDYYERALFN-------- 407 Query: 349 QEYHLTGNKHGNPSSGLLTYFLPMKAGLRKDWSSETDSFFCCHGTMVQANAALNRGIYYQ 408 H G P +G Y+L + G K +++E SF+CC G+ V+ + LN IY+ Sbjct: 408 ---HRLGTIQ--PKTGYTQYYLSLTPGAWKTFNTEDKSFWCCTGSGVEEYSKLNDSIYWH 462 Query: 409 DHNDVFVCQYFHSELTTEINGENVRINQSQDHMSGSMLNSSNTAGQQELNEITALHENLP 468 D + V + SEL E G +R QE P Sbjct: 463 DAEGLTVNLFIPSELNWEEKGFRLR---------------------QE--------TKFP 493 Query: 469 NYKKYDFVVHTGAPNEFAIHFRIPDWIMSEAVIYVNDQLHGKSADHT----AFYTILRNW 524 + V A+ RIP W S AV +++G++ D T ++ T+ R W Sbjct: 494 EQQSTTLTVTAAKSAPMAMRLRIPAWTKSAAV-----KINGRAVDVTPTPGSYLTLTRPW 548 Query: 525 QDGDRISIILPVGIRFIPLPDDEQTGAFRFGPEVLAG 561 + GD+I + LP+ + +PDD +T AF +GP VLAG Sbjct: 549 KAGDKIEMTLPMHLSVEYMPDDPKTQAFLYGPIVLAG 585 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.437 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,098,143,472 Number of extensions: 181415838 Number of successful extensions: 341614 Number of sequences better than 1.0e-05: 140 Number of HSP's gapped: 341035 Number of HSP's successfully gapped: 147 Length of query: 626 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 484 Effective length of database: 1,722,912,073 Effective search space: 833889443332 Effective search space used: 833889443332 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 134 (56.2 bits)