BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0578.0003.p (288 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z933.1 C0Z933_BREBN Putative uncharacterized protein 325 4e-87 B2A6S5.1 B2A6S5_NATTJ Putative uncharacterized protein 257 1e-66 C1RXM3.1 C1RXM3_9SPHI Putative uncharacterized protein 256 2e-66 A1ZV16.1 A1ZV16_9SPHI Putative uncharacterized protein 255 3e-66 Q3M5W8.1 Q3M5W8_ANAVT Putative uncharacterized protein 235 4e-60 >C0Z933.1 C0Z933_BREBN Putative uncharacterized protein Length = 286 Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 164/287 (57%), Positives = 201/287 (70%), Gaps = 1/287 (0%) Query: 1 MNQNPNPRNKRASIARETLDILEKGNYTGPAGRMVDIAGDVNACISGTRLYAPDELPQLI 60 MNQ N R+ R IA+ETL I+E+G Y AG I D+ A IS + LY P++L Sbjct: 1 MNQGHN-RSVRVRIAQETLQIIEQGYYVNKAGEKKSITEDLAAAISQSVLYRPNDLAADT 59 Query: 61 TAARSRMGEASGRRAELAVTGESTLEAAYRLVVKEGKVQTVCLNFASAKNPGGGFLGGSQ 120 S A+ RA++ VT ES+L+AA RLVV E + VCLNFASAKNPGGGFLGGSQ Sbjct: 60 VQLPSHQTTAAQLRAKIEVTSESSLDAAKRLVVSEKRADAVCLNFASAKNPGGGFLGGSQ 119 Query: 121 AQEESLARASALYPAISQKDEMYKYNRSRKTCLYSHYMIHSPQVPVIRDSQDQLLAEPYC 180 AQEESLAR+S LYP I Q EMY Y+R KTC YS YMI+SP+VPV+RD DQLL +PY Sbjct: 120 AQEESLARSSGLYPCIVQMQEMYTYHRQLKTCFYSDYMIYSPRVPVVRDQSDQLLPDPYL 179 Query: 181 VSFITAPAVNAGVVREREPQEVGHIKTVMLERIRYILAVAAGNGHETIVLGAFGCGVFRN 240 +SF+TAPAVNAGVVREREP+ + I VM+ERIR IL AA + H TI+LGA+GCGVFRN Sbjct: 180 LSFVTAPAVNAGVVREREPENIAKIGPVMMERIRKILRAAAIHNHRTIILGAYGCGVFRN 239 Query: 241 NPAEVAGWFKQVLLDEGYQSLFKQIVFAVLDHSPQQSTLGAFRTVFS 287 +VA +F VL++E Y LF+ IVFAV D+S +Q L AF+ F+ Sbjct: 240 KAEDVADYFATVLIEEQYAQLFEHIVFAVYDNSARQENLRAFKERFA 286 >B2A6S5.1 B2A6S5_NATTJ Putative uncharacterized protein Length = 303 Score = 257 bits (656), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 138/291 (47%), Positives = 187/291 (64%), Gaps = 24/291 (8%) Query: 1 MNQNPNPRNKRASIARETLDILEKGNYTGPAGRMVDIAGDVNACISGTRLYAPDELPQLI 60 M++ + RA ARETL+I++KG Y V + ++ C+ TRLY+P++ ++ Sbjct: 1 MSRQSDTSQIRAQTARETLEIIDKGGYYNDHKEWVGLGSSIDHCVKNTRLYSPEDFSKIK 60 Query: 61 TAAR------------SRMGEASGRRAELAVTGESTLEAAYRLVVKEGKVQTVCLNFASA 108 A S + + R E+A+ ESTL AA RL+ + VCLNFASA Sbjct: 61 DYASQKLASRKSASNASEISQLKDRVLEIAL--ESTLAAANRLL--QLGYHPVCLNFASA 116 Query: 109 KNPGGGFLGGSQAQEESLARASALYPAISQKDEMYKYNRSRKTCLYSHYMIHSPQVPVIR 168 KNPGGGFL GS AQEESL+RASALY +IS++ E Y+ N+ + LY+ +MI+SPQVPV R Sbjct: 117 KNPGGGFLKGSGAQEESLSRASALYASISRQKEYYRQNKQYSSALYTDHMIYSPQVPVFR 176 Query: 169 DSQDQLLAEPYCVSFITAPAVNAGVVREREPQEVGHIKTVMLERIRYILAVAAGNGHETI 228 D QD+LL +PY V+FITAPAVNAGVVR +EP + I+ M+ERI+ I+ +A +GH I Sbjct: 177 DDQDRLLKKPYQVAFITAPAVNAGVVRSKEPDNIHLIEETMVERIQKIICLAVYHGHSAI 236 Query: 229 VLGAFGCGVFRNNPAEVAGWFKQVLLDE------GYQSLFKQIVFAVLDHS 273 VLGAFGCGVF+N+P +VA +F + L D GY LF +IVFA+L S Sbjct: 237 VLGAFGCGVFKNDPEKVAEYFHRCLFDVDEVGELGY--LFDKIVFAILARS 285 >C1RXM3.1 C1RXM3_9SPHI Putative uncharacterized protein Length = 290 Score = 256 bits (653), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 133/281 (47%), Positives = 176/281 (62%), Gaps = 1/281 (0%) Query: 8 RNKRASIARETLDILEKGNYTGPAGRMVDIAGDVNACISGTRLYAPDELPQLITAARSRM 67 +N+R +IA ETLDIL G Y P ++DI+ ++ + T Y PD+ ++ A + Sbjct: 3 KNERVAIAYETLDILSTGQYRNPKNELIDISAELQYTVDNTIHYTPDDFENVLIARDKLL 62 Query: 68 GEASGRRAELAVTGESTLEAAYRLVVKEGKVQTVCLNFASAKNPGGGFLGGSQAQEESLA 127 VT E+T AA RL+ +EG CLNFASAKNPGGGFLGG+QAQEESLA Sbjct: 63 QTPVAASCTFEVTAETTFAAAARLIREEGLEDVCCLNFASAKNPGGGFLGGAQAQEESLA 122 Query: 128 RASALYPAISQKDEMYKYNRSRKTCLYSHYMIHSPQVPVIRDSQDQLLAEPYCVSFITAP 187 RAS LY ++ MY +NR+ LYS +MI+SP VPV R+ +DQL+ PY VS IT+P Sbjct: 123 RASGLYTSLKANPAMYHFNRADGNLLYSDHMIYSPLVPVFRNDEDQLIERPYFVSIITSP 182 Query: 188 AVNAGVVREREPQEVGHIKTVMLERIRYILAVAAGNGHETIVLGAFGCGVFRNNPAEVAG 247 AVN G + E +P I+ VMLERI +LAVA N T++LGA+GCGVFRN +VA Sbjct: 183 AVNRGALIENQPNNAHRIEAVMLERIEKLLAVAVVNKQSTLILGAWGCGVFRNKTTDVAA 242 Query: 248 WFKQVLL-DEGYQSLFKQIVFAVLDHSPQQSTLGAFRTVFS 287 WF LL +E Y+ FK++VFA+ D S ++ + AF FS Sbjct: 243 WFAHHLLHNEVYRHAFKRVVFAIYDPSEKKQSKDAFIKEFS 283 >A1ZV16.1 A1ZV16_9SPHI Putative uncharacterized protein Length = 289 Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 134/280 (47%), Positives = 169/280 (60%), Gaps = 1/280 (0%) Query: 8 RNKRASIARETLDILEKGNYTGPAGRMVDIAGDVNACISGTRLYAPDELPQLITAARSRM 67 R KRA IA+ETL IL +G Y + +DI + + T LY P + + + ++ Sbjct: 4 RKKRAEIAQETLQILAQGKYIDQSQNTIDIKNSLTKSVDDTLLYTPTSFDEKVLVSSNQA 63 Query: 68 GEASGRRAELAVTGESTLEAAYRLVVKEGKVQTVCLNFASAKNPGGGFLGGSQAQEESLA 127 + + VT E+TL+AA RLV E + LNFASAKNPGGGFLGGSQAQEESLA Sbjct: 64 LKELDFDTQYEVTTETTLQAAKRLVEGENYTKVGVLNFASAKNPGGGFLGGSQAQEESLA 123 Query: 128 RASALYPAISQKDEMYKYNRSRKTCLYSHYMIHSPQVPVIRDSQDQLLAEPYCVSFITAP 187 RAS LY + + EMY NR RKT LY YM++SP VPV R+ DQLL PY +S ITAP Sbjct: 124 RASGLYACLEPQQEMYLTNRKRKTGLYLDYMVYSPDVPVFRNDDDQLLNSPYMISVITAP 183 Query: 188 AVNAGVVREREPQEVGHIKTVMLERIRYILAVAAGNGHETIVLGAFGCGVFRNNPAEVAG 247 AVNAG V+ P E I T ML R +L +A + HE +VLGA+GCGVF+NNP ++A Sbjct: 184 AVNAGSVKANYPAEQDLIATTMLARTEKVLTLAVLHQHEVLVLGAWGCGVFKNNPKDIAQ 243 Query: 248 WFKQVLLDEG-YQSLFKQIVFAVLDHSPQQSTLGAFRTVF 286 +F L EG + F++IVFAV Q L AF F Sbjct: 244 YFATHLFGEGKFNRAFRKIVFAVYSGQKQNPNLPAFEKHF 283 >Q3M5W8.1 Q3M5W8_ANAVT Putative uncharacterized protein Length = 278 Score = 235 bits (599), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 122/279 (43%), Positives = 178/279 (63%), Gaps = 3/279 (1%) Query: 10 KRASIARETLDILEKGNYTGPAGRMVDIAGDVNACISGTRLYAPDELPQLITAARSRMGE 69 +R +IA TL+IL GNY G VDI+ ++ C+ T+ Y+P+ L ++ T + + Sbjct: 2 RRIAIAENTLNILNMGNYLCADGNQVDISHELEQCLYLTKCYSPENLAKIETKVLNSLPR 61 Query: 70 ASGRRAELAVTGESTLEAAYRLVVKEGKVQTVCLNFASAKNPGGGFLGGSQAQEESLARA 129 S E +V E+TL A R+V E Q LNFASAKNPGGGF+ G+QAQEESLAR+ Sbjct: 62 FSA--TEFSVRNETTLMGAERIVKSEKFQQVGVLNFASAKNPGGGFIRGAQAQEESLARS 119 Query: 130 SALYPAISQKDEMYKYNRSRKTCLYSHYMIHSPQVPVIRDSQDQLLAEPYCVSFITAPAV 189 SALY ++ + E Y ++R ++ LYS +MI+SP PV ++ +LLA+PY V FIT+PA Sbjct: 120 SALYKSLLKCPEYYNFHRHERSLLYSDWMIYSPICPVFKNDDGELLAQPYIVDFITSPAP 179 Query: 190 NAGVVREREPQEVGHIKTVMLERIRYILAVAAGNGHETIVLGAFGCGVFRNNPAEVAGWF 249 NAG++++ +P I V++ R +L++A G +T+VLGA+GCGVFRN+P+ VA F Sbjct: 180 NAGMIQKNQPHLSVKIPQVLMNRTSKLLSLATNQGCDTLVLGAWGCGVFRNDPSIVAQIF 239 Query: 250 KQVLLDEG-YQSLFKQIVFAVLDHSPQQSTLGAFRTVFS 287 +LL G + FK ++F+VLD+S QQ+ F FS Sbjct: 240 ADLLLPGGQFWGRFKSVIFSVLDNSKQQAIFTEFDRRFS 278 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,656,435,678 Number of extensions: 65563420 Number of successful extensions: 178899 Number of sequences better than 1.0e-05: 118 Number of HSP's gapped: 178713 Number of HSP's successfully gapped: 118 Length of query: 288 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 154 Effective length of database: 1,798,280,193 Effective search space: 276935149722 Effective search space used: 276935149722 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)