BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0576.0006.p (632 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2Y3V6.1 C2Y3V6_BACCE PTS system, IIabc component 614 e-174 C2Q5B5.1 C2Q5B5_BACCE PTS system, IIabc component 611 e-173 C2VLY0.1 C2VLY0_BACCE PTS system, IIabc component 590 e-166 C2V4W6.1 C2V4W6_BACCE PTS system, IIabc component 590 e-166 C2U6F5.1 C2U6F5_BACCE PTS system, IIabc component 589 e-166 >C2Y3V6.1 C2Y3V6_BACCE PTS system, IIabc component Length = 622 Score = 614 bits (1584), Expect = e-174, Method: Compositional matrix adjust. Identities = 315/637 (49%), Positives = 430/637 (67%), Gaps = 22/637 (3%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 MKYE+L+K I+Q IGG+ENV ++VHCATRLRF L + L DKEKL+ LEGVLSVVES GQ Sbjct: 1 MKYEKLSKKIIQGIGGKENVKSVVHCATRLRFQLNNKTLLDKEKLEHLEGVLSVVESTGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEK--MMSRIFAVISGSLSPLLPAM 118 Q+V+G++VA VY ++++ +G+ S NQPKEK + + IF +ISG+ +PLL + Sbjct: 61 IQIVIGSNVADVYNDLVQVGNFNSGSVQSN--NQPKEKVKLTAMIFELISGTFTPLLAPL 118 Query: 119 AGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVGG 178 AGAG+LKA L + FG +S SGTY ILAAA NA+ YFLP+ +G++ + K GAN Y+GG Sbjct: 119 AGAGMLKAILAVLVMFGVLSERSGTYGILAAAGNAILYFLPVMIGITLAIKLGANGYMGG 178 Query: 179 VIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIHK 238 +IGA+L+EPNFT L++NGDT+SFLGIPV+LMDYSS++ P F+A+ I++ +EKFLKK+IHK Sbjct: 179 IIGASLLEPNFTSLMSNGDTTSFLGIPVLLMDYSSSIVPSFIAVLIYAQLEKFLKKVIHK 238 Query: 239 ELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFFL 298 +LQ F+ T ++FGPFG+Y+G I +IN+L SGLLTGAVIGG + L Sbjct: 239 DLQLFLSPMISLIIIVPLTVLVFGPFGIYVGKMITSSINFLSEHSGLLTGAVIGGTMIIL 298 Query: 299 VVFGLHWGIIPIVLANLANGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXXX 358 VVFGLHW +IP+ + NL NG DPI MWAAS FA G+AL +FLK+K+K LKS+AG Sbjct: 299 VVFGLHWALIPMSIENLTNGGDPIDPMWAASTFAQMGIALGIFLKTKDKKLKSLAGSTTI 358 Query: 359 XXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSI-GAFE 417 +GV+EP +YG++L HKRT+ Y F A AF+ +IF++ G+ Sbjct: 359 TGLLSGVTEPIIYGLILTHKRTLAYVIIVGAIGGAFIGSFKAEAKAFMLHSIFTLGGSTT 418 Query: 418 PVGYYXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGSTPASNK 477 P Y T GY+DK P+ +K ++ G SN Sbjct: 419 PWLPYFFMILLTVGGATLLTYFFGYEDK-------------PSKQKGKME-GEPKQLSNP 464 Query: 478 ASTSK---KEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTVGTI 534 +T K K+++ SPL+G++ L+QV D F+ AMGKGIAI P+ G+ +SPVNGTV T+ Sbjct: 465 NNTKKVLNKQIINSPLSGQVIPLSQVNDQVFSSEAMGKGIAIDPNKGEVISPVNGTVTTM 524 Query: 535 LKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKIKEA 594 +GHAV + S+ G EILIH+GI+TVQL G+Y+T V+ GD V G LI+FE++KIKEA Sbjct: 525 FPTGHAVGITSDDGIEILIHVGIDTVQLDGKYYTKLVETGDSVSMGQSLIQFEIDKIKEA 584 Query: 595 GYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 GY TPII++N+ +LD+I+TTN +V+ LLT+V Sbjct: 585 GYETTTPIIVTNSNQFLDIIQTTNQSVSTNANLLTIV 621 >C2Q5B5.1 C2Q5B5_BACCE PTS system, IIabc component Length = 622 Score = 611 bits (1576), Expect = e-173, Method: Compositional matrix adjust. Identities = 314/637 (49%), Positives = 429/637 (67%), Gaps = 22/637 (3%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 MKYE+L+K I+Q IGG+ENV ++VHCATRLRF L + L DKEKL+ LEG+LSVVES GQ Sbjct: 1 MKYEKLSKKIIQGIGGKENVKSVVHCATRLRFQLNNKTLLDKEKLEHLEGILSVVESTGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEK--MMSRIFAVISGSLSPLLPAM 118 Q+V+G++VA VY ++++ +G S NQPKEK + + IF +ISG+ +PLL + Sbjct: 61 IQIVIGSNVADVYNDLVQVGNFNSGPVQSN--NQPKEKVKLTAMIFELISGTFTPLLAPL 118 Query: 119 AGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVGG 178 AGAG+LKA L + FG +S +SGTY ILAAA NA+ YFLP+ +G++ + K GAN Y+GG Sbjct: 119 AGAGMLKAILAVLVMFGVLSEKSGTYGILAAAGNAILYFLPVMIGITLAIKLGANGYMGG 178 Query: 179 VIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIHK 238 +IGA+L+EPNFT L++NGDT+SFLGIPV+LMDYSS++ P F+A+ I++ +EKFLKK IHK Sbjct: 179 IIGASLLEPNFTNLMSNGDTTSFLGIPVLLMDYSSSIVPSFIAVLIYAQLEKFLKKFIHK 238 Query: 239 ELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFFL 298 +LQ F+ T ++FGPFG+Y+G I +IN+L SGLLTGAVIGG + L Sbjct: 239 DLQLFLSPMISLIIIVPLTVLVFGPFGIYVGKMITSSINFLSEHSGLLTGAVIGGTMIIL 298 Query: 299 VVFGLHWGIIPIVLANLANGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXXX 358 VVFGLHW +IP+ + NL NG DPI MWAAS FA G+AL +FLK+K+K LKS+AG Sbjct: 299 VVFGLHWALIPMSIENLTNGGDPIDPMWAASTFAQMGIALGIFLKTKDKKLKSLAGSTTI 358 Query: 359 XXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSI-GAFE 417 +GV+EP +YG++L HKRT+ Y F A AF+ +IF++ G+ Sbjct: 359 TGLLSGVTEPIIYGLILTHKRTLAYVIIVGAIGGAFIGSFKAEAKAFMLHSIFTLGGSTT 418 Query: 418 PVGYYXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGSTPASNK 477 P Y T GY+DK P+ +K ++ G SN Sbjct: 419 PWLPYFLMILLTVGGATLLTYFFGYEDK-------------PSKQKGKME-GEPKQLSNP 464 Query: 478 ASTSK---KEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTVGTI 534 +T K K+++ SPL+G++ L+QV D F+ AMGKGIAI P+ G+ +SPVNGTV T+ Sbjct: 465 NNTKKVLNKQIINSPLSGQVIPLSQVNDQVFSSEAMGKGIAINPNKGEVISPVNGTVTTM 524 Query: 535 LKSGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKIKEA 594 +GHAV + S+ G EILIH+GI+TVQL G+Y+T V+ GD V G LI+FE++KIKEA Sbjct: 525 FPTGHAVGITSDDGIEILIHVGIDTVQLDGEYYTKLVETGDSVSMGQSLIQFEIDKIKEA 584 Query: 595 GYNPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 GY TPII++N+ +LD+I+TTN +V+ LLT+V Sbjct: 585 GYETTTPIIVTNSNQFLDIIQTTNQSVSTNANLLTIV 621 >C2VLY0.1 C2VLY0_BACCE PTS system, IIabc component Length = 611 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 311/635 (48%), Positives = 417/635 (65%), Gaps = 29/635 (4%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M Y LAK+I+Q+IGGE NV +L HCATRLRF +KD+ +KE L++++GV+SVV++GGQ Sbjct: 1 MSYTSLAKEILQHIGGENNVNSLEHCATRLRFKVKDSNKVNKEVLENVKGVISVVQTGGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEKMMS---RIFAVISGSLSPLLPA 117 QVV+G+ V+ V++EI +K+G + S+DAN+ E+ S +IF +ISG+ +PLL Sbjct: 61 QQVVIGSHVSDVFKEI---NKIG---NFSKDANETSEEKTSLSGKIFELISGTFTPLLAP 114 Query: 118 MAGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVG 177 +AGAG+LKA L + F +S +SGTY IL+AA NA+ YFLPI +G + + K GANPY+G Sbjct: 115 LAGAGMLKALLGVLVMFDLLSDKSGTYAILSAAGNAILYFLPIMIGFTLATKLGANPYMG 174 Query: 178 GVIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIH 237 G+IGAAL+EPNFT LLANGDTSSFLGIPV+L+DYSS + P F+++ I++ +EKFLKK+I+ Sbjct: 175 GIIGAALLEPNFTALLANGDTSSFLGIPVILIDYSSQIVPSFISVLIYAQLEKFLKKVIY 234 Query: 238 KELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFF 297 K+LQ F+ A+ FGPFG Y+G +A IN+L SGLLTGAV+GG + F Sbjct: 235 KDLQMFLVPMLSLMIIVPLAAIAFGPFGTYVGKMVATGINFLSEHSGLLTGAVVGGTMVF 294 Query: 298 LVVFGLHWGIIPIVLANLANGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXX 357 L++FGLHW ++P+ + NL NG DPI MWAAS FA G+AL +FLK+K K KS+AG Sbjct: 295 LIMFGLHWALVPMSIENLMNGGDPIDPMWAASTFAQTGIALGIFLKTKNKETKSLAGSTA 354 Query: 358 XXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSI-GAF 416 AGV+EP +YG++ HKRT+ Y F AF +IF++ G Sbjct: 355 LTGILAGVTEPILYGLIATHKRTLKYVVIVGVIGGAFIGAFKAENNAFALHSIFTLSGTT 414 Query: 417 EPVGYYXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGSTPASN 476 P Y T LGY++K+ E+ NT + E Sbjct: 415 TPWLPYFLMIIMTVGGAAALTYFLGYENKE------ELQNTETSKEA------------- 455 Query: 477 KASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTVGTILK 536 A+ KKE ++SPLTG + L QV D FA AMGKGIAI P+VG+ SPVNG + TI Sbjct: 456 GATVVKKEGIVSPLTGTITPLNQVKDAVFASEAMGKGIAIEPTVGEVHSPVNGVITTIFP 515 Query: 537 SGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKIKEAGY 596 +GHAV + S+ GAEILIHIGI+TVQL+G+YF VK GD VR G LI+F++EKIKEAGY Sbjct: 516 TGHAVGITSDDGAEILIHIGIDTVQLEGKYFNAHVKTGDKVRKGQHLIDFDIEKIKEAGY 575 Query: 597 NPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 TP+II+NT Y D+IET +T + LLTL+ Sbjct: 576 LVTTPVIITNTAQYTDIIETNKEQITKNEDLLTLI 610 >C2V4W6.1 C2V4W6_BACCE PTS system, IIabc component Length = 611 Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust. Identities = 311/635 (48%), Positives = 417/635 (65%), Gaps = 29/635 (4%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M Y LAK+I+Q+IGGE NV +L HCATRLRF +KD+ +KE L++++GV+SVV++GGQ Sbjct: 1 MSYTSLAKEILQHIGGENNVNSLEHCATRLRFKVKDSNKVNKEVLENVKGVISVVQTGGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEKMMS---RIFAVISGSLSPLLPA 117 QVV+G+ V+ V++EI +K+G + S+DAN+ E+ S +IF +ISG+ +PLL Sbjct: 61 QQVVIGSHVSDVFKEI---NKIG---NFSKDANETSEEKTSLSGKIFELISGTFTPLLAP 114 Query: 118 MAGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVG 177 +AGAG+LKA L + F +S +SGTY IL+AA NA+ YFLPI +G + + K GANPY+G Sbjct: 115 LAGAGMLKALLGVLVMFDLLSDKSGTYAILSAAGNAILYFLPIMIGFTLATKLGANPYMG 174 Query: 178 GVIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIH 237 G+IGAAL+EPNFT LLANGDTSSFLGIPV+L+DYSS + P F+++ I++ +EKFLKK+I+ Sbjct: 175 GIIGAALLEPNFTALLANGDTSSFLGIPVILIDYSSQIVPSFISVLIYAQLEKFLKKVIY 234 Query: 238 KELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFF 297 K+LQ F+ A+ FGPFG Y+G +A IN+L SGLLTGAV+GG + F Sbjct: 235 KDLQMFLVPMLSLMIIVPLAAIAFGPFGTYVGKMVATGINFLSEHSGLLTGAVVGGTMVF 294 Query: 298 LVVFGLHWGIIPIVLANLANGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXX 357 L++FGLHW ++P+ + NL NG DPI MWAAS FA G+AL +FLK+K K KS+AG Sbjct: 295 LIMFGLHWALVPMSIENLMNGGDPIDPMWAASTFAQTGIALGIFLKTKNKETKSLAGSTA 354 Query: 358 XXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSI-GAF 416 AGV+EP +YG++ HKRT+ Y F AF +IF++ G Sbjct: 355 LTGILAGVTEPILYGLIATHKRTLKYVVIVGVIGGAFIGAFKAENNAFALHSIFTLSGTT 414 Query: 417 EPVGYYXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGSTPASN 476 P Y T LGY++K+ E+ NT + E Sbjct: 415 TPWLPYFLMIIMTVGGAAALTYFLGYENKE------ELQNTETSKEA------------- 455 Query: 477 KASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTVGTILK 536 A+ KKE ++SPLTG + L QV D FA AMGKGIAI P+VG+ SPVNG + TI Sbjct: 456 GATVVKKEGIVSPLTGTITPLNQVKDAVFASEAMGKGIAIEPTVGEVHSPVNGVITTIFP 515 Query: 537 SGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKIKEAGY 596 +GHAV + S+ GAEILIHIGI+TVQL+G+YF VK GD VR G LI+F++EKIKEAGY Sbjct: 516 TGHAVGITSDDGAEILIHIGIDTVQLEGKYFNAHVKTGDKVRKGQHLIDFDIEKIKEAGY 575 Query: 597 NPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 TP+II+NT Y D+IET +T + LLTL+ Sbjct: 576 LVTTPVIITNTAQYTDIIETNKEQITKNEDLLTLI 610 >C2U6F5.1 C2U6F5_BACCE PTS system, IIabc component Length = 611 Score = 589 bits (1518), Expect = e-166, Method: Compositional matrix adjust. Identities = 311/635 (48%), Positives = 418/635 (65%), Gaps = 29/635 (4%) Query: 1 MKYERLAKDIVQNIGGEENVTNLVHCATRLRFNLKDNQLPDKEKLKSLEGVLSVVESGGQ 60 M Y LAK+I+Q+IGGE NV +L HCATRLRF +KD+ +KE L++++GV+SVV++GGQ Sbjct: 1 MSYTSLAKEILQHIGGENNVNSLEHCATRLRFKVKDSNKVNKEVLENVKGVISVVQTGGQ 60 Query: 61 FQVVVGNDVAHVYQEIMKNSKLGAGNSASEDANQPKEKMMS---RIFAVISGSLSPLLPA 117 QVV+G+ V+ V++EI +K+G + S+DAN+ E+ S +IF +ISG+ +PLL Sbjct: 61 QQVVIGSHVSDVFKEI---NKIG---NFSKDANETSEEKTSLSGKIFELISGTFTPLLAP 114 Query: 118 MAGAGILKAFLTLFTTFGWISAESGTYLILAAAANAVFYFLPIFLGVSASFKFGANPYVG 177 +AGAG+LKA L + F +S +SGTY IL+AA NA+ YFLPI +G + + K GANPY+G Sbjct: 115 LAGAGMLKALLGVLVMFDLLSDKSGTYAILSAAGNAILYFLPIMIGFTLATKLGANPYMG 174 Query: 178 GVIGAALMEPNFTGLLANGDTSSFLGIPVVLMDYSSTVFPVFVAIWIFSYVEKFLKKIIH 237 G+IGAAL+EPNFT LLANGDTSSFLGIPV+L+DYSS + P F+++ I++ +EKFLKK+I+ Sbjct: 175 GIIGAALLEPNFTALLANGDTSSFLGIPVILIDYSSQIVPSFISVLIYAQLEKFLKKVIY 234 Query: 238 KELQTFMXXXXXXXXXXXXTAMIFGPFGVYIGNAIADAINYLMGVSGLLTGAVIGGLIFF 297 K+LQ F+ A+ FGPFG Y+G +A IN+L SGLLTGAV+GG + F Sbjct: 235 KDLQMFLVPMLSLMIIVPLAAIAFGPFGTYVGKMVATGINFLSEHSGLLTGAVVGGTMVF 294 Query: 298 LVVFGLHWGIIPIVLANLANGTDPILAMWAASNFAMAGVALAVFLKSKEKSLKSIAGXXX 357 L++FGLHW ++P+ + NL NG DPI MWAAS FA G+AL +FLK+K K KS+AG Sbjct: 295 LIMFGLHWALVPMSIENLMNGGDPIDPMWAASTFAQTGIALGIFLKTKNKETKSLAGSTA 354 Query: 358 XXXXXAGVSEPTVYGILLRHKRTIPYXXXXXXXXXXXXXXFHTYATAFVFQNIFSI-GAF 416 AGV+EP +YG++ HKRT+ Y F AF +IF++ G Sbjct: 355 LTGILAGVTEPILYGLIATHKRTLKYVVIVGAIGGAFIGAFKAENNAFALHSIFTLSGTT 414 Query: 417 EPVGYYXXXXXXXXXXXXXXTVLLGYQDKKKSEAVTEISNTAPAVEKKAVQPGGSTPASN 476 P Y T LGY++K+ E+ N K+ + G+T Sbjct: 415 TPWLPYFLMIIMTVGGAAALTYFLGYENKE------ELQN------KETSKEAGAT---- 458 Query: 477 KASTSKKEVLLSPLTGELKSLTQVPDPAFAEGAMGKGIAIIPSVGQAVSPVNGTVGTILK 536 KKE ++SPLTG + L QV D FA AMGKGIAI P+VG+ SPVNG + TI Sbjct: 459 ---VVKKEGIVSPLTGTITPLNQVKDAVFASEAMGKGIAIEPTVGEVHSPVNGVITTIFP 515 Query: 537 SGHAVILLSESGAEILIHIGINTVQLKGQYFTPRVKAGDHVRTGDVLIEFELEKIKEAGY 596 +GHAV + S+ GAEILIHIGI+TVQL+G+YF VK GD VR G LI+F++EKIKEAGY Sbjct: 516 TGHAVGITSDDGAEILIHIGIDTVQLEGKYFNAHVKTGDKVRKGQHLIDFDIEKIKEAGY 575 Query: 597 NPITPIIISNTGDYLDVIETTNSTVTAQDKLLTLV 631 TP+II+NT Y D+IET +T + LLTL+ Sbjct: 576 LVTTPVIITNTAQYTDIIETNKEQITKNEDLLTLI 610 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,400,373,992 Number of extensions: 140608118 Number of successful extensions: 477115 Number of sequences better than 1.0e-05: 3067 Number of HSP's gapped: 470670 Number of HSP's successfully gapped: 3614 Length of query: 632 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 490 Effective length of database: 1,722,912,073 Effective search space: 844226915770 Effective search space used: 844226915770 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)