BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0574.0028.p
         (207 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C3J7J5.1 C3J7J5_9BACI Putative uncharacterized protein                 78   4e-13
B7YFV6.1 B7YFV6_9BACI Putative uncharacterized protein                 78   4e-13

>C3J7J5.1 C3J7J5_9BACI Putative uncharacterized protein
          Length = 154

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 64/113 (56%)

Query: 3   LFRVKTGLPGVGRMKEFLEENYVCLGYTGVGDLEHAGKKEIHTRLVLAGITAGAELEAAA 62
           +F++KT   G  R  EF+ +  + +G+  +G+L+   K E+  RL      +GA+L  A 
Sbjct: 4   VFQIKTKPHGFQRYDEFIRDQVIGIGWPLIGNLDGISKDELRERLRNVYHYSGAKLGNAL 63

Query: 63  DSLDIFVNVMQDGDYVLIEDGEWAYLGDLGDYFYVEAFDSAEDGRCHRRGVTW 115
            ++  FV+ M+ GD VL+  G W  +G +G Y YV+  D+  DG CH+R V W
Sbjct: 64  GAIWAFVHTMEQGDVVLVRHGAWLSIGIIGPYRYVKHLDNDIDGFCHQRSVEW 116


>B7YFV6.1 B7YFV6_9BACI Putative uncharacterized protein
          Length = 154

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 64/113 (56%)

Query: 3   LFRVKTGLPGVGRMKEFLEENYVCLGYTGVGDLEHAGKKEIHTRLVLAGITAGAELEAAA 62
           +F++KT   G  R  EF+ +  + +G+  +G+L+   K E+  RL      +GA+L  A 
Sbjct: 4   VFQIKTKPHGFQRYDEFIRDQVIGIGWPLIGNLDGISKDELRERLRNVYHYSGAKLGNAL 63

Query: 63  DSLDIFVNVMQDGDYVLIEDGEWAYLGDLGDYFYVEAFDSAEDGRCHRRGVTW 115
            ++  FV+ M+ GD VL+  G W  +G +G Y YV+  D+  DG CH+R V W
Sbjct: 64  GAIWAFVHTMEQGDVVLVRHGAWLSIGIIGPYRYVKHLDNDIDGFCHQRSVEW 116


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.139    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,217,162,424
Number of extensions: 52555873
Number of successful extensions: 116448
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 116449
Number of HSP's successfully gapped: 2
Length of query: 207
Length of database: 3,060,696,203
Length adjustment: 129
Effective length of query: 78
Effective length of database: 1,845,385,268
Effective search space: 143940050904
Effective search space used: 143940050904
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)