BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0574.0026.p (137 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3BS46.1 C3BS46_9BACI Putative uncharacterized protein 175 1e-42 C3BA69.1 C3BA69_BACMY Putative uncharacterized protein 175 1e-42 C3ASS0.1 C3ASS0_BACMY Putative uncharacterized protein 175 1e-42 Q815S2.1 Q815S2_BACCR Putative uncharacterized protein 173 6e-42 Q81XC8.1 Q81XC8_BACAN Putative uncharacterized protein 172 6e-42 >C3BS46.1 C3BS46_9BACI Putative uncharacterized protein Length = 146 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/144 (68%), Positives = 116/144 (80%), Gaps = 10/144 (6%) Query: 1 MSETITQSK----------SFIKEDLLDQLLKPEVQESLTTLVEQLPQITQLVGALTKSL 50 M ETITQ+K S + D+LDQLLKPEVQESLTTLVEQLP++T+LV LTKS Sbjct: 1 MPETITQTKPEQESLQISASQGQLDVLDQLLKPEVQESLTTLVEQLPKLTELVNILTKSY 60 Query: 51 DFVQTVAADEVLKNDTVGAIKELAEPVVDSVKTMAATVIEAKDRANESSENITLFGMMRM 110 DF QTVA DEVLK+DTVGAI+E+ EPV D+VK+MAAT IEAKDRA ESSE I LFG++++ Sbjct: 61 DFAQTVATDEVLKSDTVGAIQEIVEPVKDTVKSMAATAIEAKDRAEESSEVIGLFGLLKL 120 Query: 111 IKDPQVQKMLRFMNAYLQVSGERN 134 +KDPQ QKM RF+NAYLQ+S ERN Sbjct: 121 LKDPQAQKMFRFINAYLQISAERN 144 >C3BA69.1 C3BA69_BACMY Putative uncharacterized protein Length = 146 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/144 (68%), Positives = 116/144 (80%), Gaps = 10/144 (6%) Query: 1 MSETITQSK----------SFIKEDLLDQLLKPEVQESLTTLVEQLPQITQLVGALTKSL 50 M ETITQ+K S + D+LDQLLKPEVQESLTTLVEQLP++T+LV LTKS Sbjct: 1 MPETITQTKPEQESLQISASQGQLDVLDQLLKPEVQESLTTLVEQLPKLTELVNILTKSY 60 Query: 51 DFVQTVAADEVLKNDTVGAIKELAEPVVDSVKTMAATVIEAKDRANESSENITLFGMMRM 110 DF QTVA DEVLK+DTVGAI+E+ EPV D+VK+MAAT IEAKDRA ESSE I LFG++++ Sbjct: 61 DFAQTVATDEVLKSDTVGAIQEIVEPVKDTVKSMAATAIEAKDRAEESSEVIGLFGLLKL 120 Query: 111 IKDPQVQKMLRFMNAYLQVSGERN 134 +KDPQ QKM RF+NAYLQ+S ERN Sbjct: 121 LKDPQAQKMFRFINAYLQISAERN 144 >C3ASS0.1 C3ASS0_BACMY Putative uncharacterized protein Length = 146 Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/144 (68%), Positives = 116/144 (80%), Gaps = 10/144 (6%) Query: 1 MSETITQSK----------SFIKEDLLDQLLKPEVQESLTTLVEQLPQITQLVGALTKSL 50 M ETITQ+K S + D+LDQLLKPEVQESLTTLVEQLP++T+LV LTKS Sbjct: 1 MPETITQTKPEQESLQISASQGQLDVLDQLLKPEVQESLTTLVEQLPKLTELVNILTKSY 60 Query: 51 DFVQTVAADEVLKNDTVGAIKELAEPVVDSVKTMAATVIEAKDRANESSENITLFGMMRM 110 DF QTVA DEVLK+DTVGAI+E+ EPV D+VK+MAAT IEAKDRA ESSE I LFG++++ Sbjct: 61 DFAQTVATDEVLKSDTVGAIQEIVEPVKDTVKSMAATAIEAKDRAEESSEVIGLFGLLKL 120 Query: 111 IKDPQVQKMLRFMNAYLQVSGERN 134 +KDPQ QKM RF+NAYLQ+S ERN Sbjct: 121 LKDPQAQKMFRFINAYLQISAERN 144 >Q815S2.1 Q815S2_BACCR Putative uncharacterized protein Length = 148 Score = 173 bits (438), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 94/132 (71%), Positives = 112/132 (84%) Query: 3 ETITQSKSFIKEDLLDQLLKPEVQESLTTLVEQLPQITQLVGALTKSLDFVQTVAADEVL 62 ET+ S S + D+LDQLLKPEVQESLTTLVEQLP++T+LV LTKS DF QTVA DEVL Sbjct: 15 ETVQISASQGQLDVLDQLLKPEVQESLTTLVEQLPKLTELVNILTKSYDFAQTVATDEVL 74 Query: 63 KNDTVGAIKELAEPVVDSVKTMAATVIEAKDRANESSENITLFGMMRMIKDPQVQKMLRF 122 K+DTVGAI EL EPV D+VK+MAAT IEAKDRA+ES+E I LFG+++++KDPQ QKM RF Sbjct: 75 KSDTVGAITELVEPVKDTVKSMAATAIEAKDRADESNEVIGLFGLLKLLKDPQAQKMFRF 134 Query: 123 MNAYLQVSGERN 134 +NAYLQ+S ERN Sbjct: 135 VNAYLQISAERN 146 >Q81XC8.1 Q81XC8_BACAN Putative uncharacterized protein Length = 146 Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 94/132 (71%), Positives = 112/132 (84%) Query: 3 ETITQSKSFIKEDLLDQLLKPEVQESLTTLVEQLPQITQLVGALTKSLDFVQTVAADEVL 62 ET+ S S + D+LDQLLKPEVQESLTTLVEQLP++T+LV LTKS DF QTVA DEVL Sbjct: 13 ETVQISASQGQLDVLDQLLKPEVQESLTTLVEQLPKLTELVNILTKSYDFAQTVATDEVL 72 Query: 63 KNDTVGAIKELAEPVVDSVKTMAATVIEAKDRANESSENITLFGMMRMIKDPQVQKMLRF 122 K+DTVGAI EL EPV D+VK+MAAT IEAKDRA+ES+E I LFG+++++KDPQ QKM RF Sbjct: 73 KSDTVGAITELVEPVKDTVKSMAATAIEAKDRADESNEVIGLFGLLKLLKDPQAQKMFRF 132 Query: 123 MNAYLQVSGERN 134 +NAYLQ+S ERN Sbjct: 133 VNAYLQISAERN 144 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.127 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 626,417,270 Number of extensions: 19414289 Number of successful extensions: 62659 Number of sequences better than 1.0e-05: 86 Number of HSP's gapped: 62656 Number of HSP's successfully gapped: 86 Length of query: 137 Length of database: 3,060,696,203 Length adjustment: 101 Effective length of query: 36 Effective length of database: 2,109,173,688 Effective search space: 75930252768 Effective search space used: 75930252768 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 125 (52.8 bits)