BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0574.0023.p
         (117 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0ZA20.1 C0ZA20_BREBN Putative uncharacterized protein                129   8e-29
C3AY89.1 C3AY89_BACMY Putative uncharacterized protein                124   3e-27
C3AGF5.1 C3AGF5_BACMY Putative uncharacterized protein                124   3e-27
C3BUB4.1 C3BUB4_9BACI Putative uncharacterized protein                124   4e-27
C3FJT1.1 C3FJT1_BACTB Putative uncharacterized protein                122   9e-27

>C0ZA20.1 C0ZA20_BREBN Putative uncharacterized protein
          Length = 283

 Score =  129 bits (324), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 61/100 (61%), Positives = 72/100 (72%)

Query: 1   MTDLQRIAAEEYRLREGEEVQDFIRLMLEYIGDPQPELRDGLIYPTFYAWILEQRLFTSD 60
           M DLQRI  E Y+LREGE  QDF+ LML++IGDPQPELRDGLIYPT Y WI E   FT  
Sbjct: 9   MIDLQRIEKEHYQLREGERTQDFLTLMLQFIGDPQPELRDGLIYPTLYTWIYEDNRFTET 68

Query: 61  ELRGILAVLLDEQHLFHGIGGQGDETVFTEPSRYLSSALL 100
           EL  +LA+L DE HLF+ IG +GD++VFT     L  AL+
Sbjct: 69  ELSNLLAILTDEHHLFYHIGSEGDQSVFTRTFSVLPVALI 108


>C3AY89.1 C3AY89_BACMY Putative uncharacterized protein
          Length = 273

 Score =  124 bits (310), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 74/100 (74%)

Query: 1   MTDLQRIAAEEYRLREGEEVQDFIRLMLEYIGDPQPELRDGLIYPTFYAWILEQRLFTSD 60
           M DLQRI  ++Y+LREGE+ QDF+ L+L+YIGDPQPELRD LIYP FY WI E+  F+ +
Sbjct: 1   MLDLQRIEKDKYQLREGEQHQDFLPLLLQYIGDPQPELRDNLIYPMFYMWIKEENRFSGE 60

Query: 61  ELRGILAVLLDEQHLFHGIGGQGDETVFTEPSRYLSSALL 100
           ELR +L VL DE HLF+ IG + D++VFT     L  AL+
Sbjct: 61  ELRSLLTVLTDENHLFYNIGSEDDQSVFTRTFSALPIALI 100


>C3AGF5.1 C3AGF5_BACMY Putative uncharacterized protein
          Length = 273

 Score =  124 bits (310), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 74/100 (74%)

Query: 1   MTDLQRIAAEEYRLREGEEVQDFIRLMLEYIGDPQPELRDGLIYPTFYAWILEQRLFTSD 60
           M DLQRI  ++Y+LREGE+ QDF+ L+L+YIGDPQPELRD LIYP FY WI E+  F+ +
Sbjct: 1   MLDLQRIEKDKYQLREGEQHQDFLPLLLQYIGDPQPELRDNLIYPMFYMWIKEENRFSGE 60

Query: 61  ELRGILAVLLDEQHLFHGIGGQGDETVFTEPSRYLSSALL 100
           ELR +L VL DE HLF+ IG + D++VFT     L  AL+
Sbjct: 61  ELRSLLTVLTDENHLFYNIGSEDDQSVFTRTFSALPIALI 100


>C3BUB4.1 C3BUB4_9BACI Putative uncharacterized protein
          Length = 273

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 74/100 (74%)

Query: 1   MTDLQRIAAEEYRLREGEEVQDFIRLMLEYIGDPQPELRDGLIYPTFYAWILEQRLFTSD 60
           M DLQRI  ++Y+LREGE+ QDF+ L+L+YIGDPQPELRD LIYP FY WI E+  F+ +
Sbjct: 1   MLDLQRIEKDKYQLREGEQHQDFLPLLLQYIGDPQPELRDNLIYPMFYMWIKEENRFSGE 60

Query: 61  ELRGILAVLLDEQHLFHGIGGQGDETVFTEPSRYLSSALL 100
           ELR +L VL DE HLF+ IG + D++VFT     L  AL+
Sbjct: 61  ELRSLLTVLTDENHLFYNIGSEDDQSVFTRTFSALPIALI 100


>C3FJT1.1 C3FJT1_BACTB Putative uncharacterized protein
          Length = 273

 Score =  122 bits (306), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 58/100 (58%), Positives = 73/100 (73%)

Query: 1   MTDLQRIAAEEYRLREGEEVQDFIRLMLEYIGDPQPELRDGLIYPTFYAWILEQRLFTSD 60
           M DLQRI  +EY+LREGE+ QDF+ L+L+YIGDPQPELRD LIY  FY WI E+  F+ +
Sbjct: 1   MLDLQRIEKDEYQLREGEQHQDFLPLLLQYIGDPQPELRDNLIYSMFYMWIKEENRFSEE 60

Query: 61  ELRGILAVLLDEQHLFHGIGGQGDETVFTEPSRYLSSALL 100
           ELR +L VL DE HLF+ IG + D++VFT     L  AL+
Sbjct: 61  ELRSLLTVLTDENHLFYSIGSEDDQSVFTRTFSALPIALI 100


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.141    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 755,999,414
Number of extensions: 29987954
Number of successful extensions: 63314
Number of sequences better than 1.0e-05: 90
Number of HSP's gapped: 63311
Number of HSP's successfully gapped: 90
Length of query: 117
Length of database: 3,060,696,203
Length adjustment: 84
Effective length of query: 33
Effective length of database: 2,269,330,943
Effective search space: 74887921119
Effective search space used: 74887921119
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)