BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0571.0033.p
         (122 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6CKN7.1 A6CKN7_9BACI Putative uncharacterized protein                169   6e-41
Q5WCQ7.1 Q5WCQ7_BACSK Putative uncharacterized protein                164   2e-39
A8M5Y5.1 A8M5Y5_SALAI Histidine triad (HIT) protein                   129   1e-28
B3E592.1 B3E592_GEOLS Histidine triad (HIT) protein                   129   1e-28
A5G927.1 A5G927_GEOUR Histidine triad (HIT) protein                   127   2e-28

>A6CKN7.1 A6CKN7_9BACI Putative uncharacterized protein
          Length = 110

 Score =  169 bits (429), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 77/109 (70%), Positives = 95/109 (87%)

Query: 14  MSEDFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNE 73
           M+ DFYCDEV SG T V+KV ET+ VLAY+HTKPFYP+HIVA+PK+HISSL+TL+ESD+ 
Sbjct: 1   MTNDFYCDEVLSGNTEVDKVKETEDVLAYHHTKPFYPVHIVAIPKKHISSLITLEESDHS 60

Query: 74  TLLELLGVIKQVAAMVTEKYGACRVSTNLGDYQDSKHLHWHIYFGEPLR 122
            LLEL+ VIK+VAA VTEK+G+C+V TN+G+YQDSKHLHWHI  G+PL 
Sbjct: 61  LLLELMLVIKEVAAEVTEKHGSCKVITNMGEYQDSKHLHWHIVTGDPLN 109


>Q5WCQ7.1 Q5WCQ7_BACSK Putative uncharacterized protein
          Length = 110

 Score =  164 bits (416), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 74/110 (67%), Positives = 92/110 (83%)

Query: 13  IMSEDFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDN 72
           + +EDFYC+EV SGKT V KV+ET++VLAY+HT P+YP+HIVA+PK+HI SLL+L+E D+
Sbjct: 1   MKTEDFYCEEVLSGKTAVKKVMETENVLAYHHTNPYYPVHIVAIPKKHIPSLLSLEEEDD 60

Query: 73  ETLLELLGVIKQVAAMVTEKYGACRVSTNLGDYQDSKHLHWHIYFGEPLR 122
             LLEL  VIK VAA V  ++GACRV TNLG YQDSKHLHWHI FG+PL+
Sbjct: 61  ALLLELFSVIKTVAAQVKAEHGACRVLTNLGTYQDSKHLHWHIAFGKPLK 110


>A8M5Y5.1 A8M5Y5_SALAI Histidine triad (HIT) protein
          Length = 113

 Score =  129 bits (324), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 63/109 (57%), Positives = 83/109 (76%)

Query: 14  MSEDFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNE 73
           M+EDFYCDE  SG+T V  V+ET+ VLA+ HT+PF+P+HIV VPKRH+ SL+ L ++  +
Sbjct: 1   MTEDFYCDEALSGRTRVTVVVETEDVLAFEHTRPFWPVHIVVVPKRHVPSLVDLGDASRD 60

Query: 74  TLLELLGVIKQVAAMVTEKYGACRVSTNLGDYQDSKHLHWHIYFGEPLR 122
            L  ++ V++QVAA V  + GACRV TNLG YQDSKHLH+H+  G PLR
Sbjct: 61  LLHRVIEVVRQVAARVEREQGACRVLTNLGRYQDSKHLHFHVCSGAPLR 109


>B3E592.1 B3E592_GEOLS Histidine triad (HIT) protein
          Length = 114

 Score =  129 bits (323), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 59/106 (55%), Positives = 74/106 (69%)

Query: 17  DFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNETLL 76
           DFYCD++  G   V   ++ D V A+YHT P +  H+V +PKRHI SL++L+ESDNE LL
Sbjct: 7   DFYCDKILKGLLEVPVYLQNDRVFAFYHTNPLWEHHVVLLPKRHIESLISLEESDNELLL 66

Query: 77  ELLGVIKQVAAMVTEKYGACRVSTNLGDYQDSKHLHWHIYFGEPLR 122
           EL+   K +AA    ++GACRV TNLG YQ SKHLHWHI  GE LR
Sbjct: 67  ELMRTAKLIAADFMARFGACRVYTNLGTYQSSKHLHWHIGAGEQLR 112


>A5G927.1 A5G927_GEOUR Histidine triad (HIT) protein
          Length = 114

 Score =  127 bits (320), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 57/106 (53%), Positives = 76/106 (71%)

Query: 17  DFYCDEVFSGKTPVNKVIETDHVLAYYHTKPFYPIHIVAVPKRHISSLLTLQESDNETLL 76
           DFYC ++  G   +    E + V A++HT P +  H+V +PK+HI SLLTL+E+DN+ LL
Sbjct: 7   DFYCGKILRGLADIRVYWENERVFAFHHTNPLWEHHVVLLPKKHIESLLTLEEADNDLLL 66

Query: 77  ELLGVIKQVAAMVTEKYGACRVSTNLGDYQDSKHLHWHIYFGEPLR 122
           ELL   K++AA  TE+YGACRV TN+G+YQ SKHLHWHI  G+ LR
Sbjct: 67  ELLATAKRIAADFTERYGACRVYTNVGEYQSSKHLHWHIGCGKQLR 112


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.139    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 739,741,830
Number of extensions: 26625855
Number of successful extensions: 59717
Number of sequences better than 1.0e-05: 226
Number of HSP's gapped: 60127
Number of HSP's successfully gapped: 226
Length of query: 122
Length of database: 3,060,696,203
Length adjustment: 88
Effective length of query: 34
Effective length of database: 2,231,646,883
Effective search space: 75875994022
Effective search space used: 75875994022
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)