BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0571.0029.p (338 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3QRN7.1 C3QRN7_9BACE FAD dependent oxidoreductase 288 5e-76 A7LWF2.1 A7LWF2_BACOV Putative uncharacterized protein 283 2e-74 A7ABE4.1 A7ABE4_9PORP Putative uncharacterized protein 272 3e-71 B7B5G2.1 B7B5G2_9PORP Putative uncharacterized protein 270 1e-70 A7AIX6.1 A7AIX6_9PORP Putative uncharacterized protein 267 9e-70 >C3QRN7.1 C3QRN7_9BACE FAD dependent oxidoreductase Length = 463 Score = 288 bits (737), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 149/320 (46%), Positives = 195/320 (60%), Gaps = 13/320 (4%) Query: 1 MTQLGAVDTDDNGKVTALITASKNGLQALQAKVYIDCTGDADVAAWAGAEYLKGDTQTGE 60 +++ AV+ N + A+I A+K+GL A +AKV+ID TGD DVAAWAGA + KG + G Sbjct: 155 FSRVAAVEMSANDTIDAIIVANKSGLVAFKAKVFIDATGDGDVAAWAGASFKKGG-EDGV 213 Query: 61 MMPATHCFTLGNVDEYAY-LNGPLLHSNNKTSPIYDILKSGCYPLIPDAHICNNMIAPRT 119 + +T CF+ NVD Y Y L GP LH++NK SPIYD++KSG YPLI H +N+I P Sbjct: 214 VQSSTLCFSFANVDSYHYNLIGPSLHTSNKNSPIYDVIKSGKYPLI-GKHFNSNLIGPDV 272 Query: 120 VGFNAGHLWEVDNTDAGSISEALMQGRKLAAAYRDALAEFIPASFGSSYVANTGSLLGVR 179 V FNAGH+ VD+TD + A+ GR++A Y +AL E P +FGS++V T SLLGVR Sbjct: 273 VQFNAGHIDNVDSTDPWDTTRAMATGRQIAEQYLEALKEVRPKAFGSAFVVKTASLLGVR 332 Query: 180 ETRRITGDYVLSVEDYVARRSFADEICRNSYFIDIHGTEKEEKQAGGKPEVIKRYGPGES 239 ++RRI GDY + +D++ R++F DEI RN Y+ID+H +E RY GES Sbjct: 333 DSRRIEGDYTFTFQDWLERKTFEDEIGRNCYYIDVHKPGHKE----------TRYKKGES 382 Query: 240 HGIPYRCLTPRSLKNVLVAGRSISCVREVQGSVRVMPVCLXXXXXXXXXXXXXXXXXXXD 299 HGIPYRCLTP+ LKN+LVAGR IS E GS+RVMP CL D Sbjct: 383 HGIPYRCLTPKGLKNLLVAGRCISTDEEAFGSLRVMPPCLVTGEAAGMAAVHAIKQARND 442 Query: 300 VHAVDIXXXXXXXXXXGAYL 319 VH +D G Y Sbjct: 443 VHKIDTVLLRKRLKEEGQYF 462 >A7LWF2.1 A7LWF2_BACOV Putative uncharacterized protein Length = 463 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 145/320 (45%), Positives = 194/320 (60%), Gaps = 13/320 (4%) Query: 1 MTQLGAVDTDDNGKVTALITASKNGLQALQAKVYIDCTGDADVAAWAGAEYLKGDTQTGE 60 +++ AV+ + V A+I A+K+GL A +AKV+ID TGD DVA WAGA + KG + G Sbjct: 155 FSRVAAVEMSADDTVDAIIVANKSGLVAFKAKVFIDATGDGDVATWAGASFKKGG-EDGI 213 Query: 61 MMPATHCFTLGNVDEYAY-LNGPLLHSNNKTSPIYDILKSGCYPLIPDAHICNNMIAPRT 119 + +T CF+ NVD Y Y L GP LH++NK SPI+D +KSG YPLI H +N+I P Sbjct: 214 LQSSTLCFSFANVDSYNYNLIGPSLHTSNKNSPIFDAIKSGKYPLI-GRHFNSNLIGPDV 272 Query: 120 VGFNAGHLWEVDNTDAGSISEALMQGRKLAAAYRDALAEFIPASFGSSYVANTGSLLGVR 179 V FNAGH+ VD+TD + + A+ GR++A Y +AL E P +FGS++V T SLLGVR Sbjct: 273 VQFNAGHIDNVDSTDPWATTRAMATGRQIAEQYLEALKELQPKTFGSAFVVKTASLLGVR 332 Query: 180 ETRRITGDYVLSVEDYVARRSFADEICRNSYFIDIHGTEKEEKQAGGKPEVIKRYGPGES 239 ++RRI GDY + +D++ R++F DEI RN Y+ID+H +E RY GES Sbjct: 333 DSRRIEGDYTFTFQDWLERKTFEDEIGRNCYYIDVHKPGHKE----------TRYKKGES 382 Query: 240 HGIPYRCLTPRSLKNVLVAGRSISCVREVQGSVRVMPVCLXXXXXXXXXXXXXXXXXXXD 299 HGIPYRCLTP+ +KN+L AGR IS E GS+RVMP CL D Sbjct: 383 HGIPYRCLTPKGMKNLLTAGRCISTDEEAFGSLRVMPPCLVTGEAAGMAAVHAIKQTKND 442 Query: 300 VHAVDIXXXXXXXXXXGAYL 319 VH +D+ G Y Sbjct: 443 VHKIDVGFLRKRLKEEGQYF 462 >A7ABE4.1 A7ABE4_9PORP Putative uncharacterized protein Length = 464 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 133/305 (43%), Positives = 192/305 (62%), Gaps = 13/305 (4%) Query: 1 MTQLGAVDTDDNGKVTALITASKNGLQALQAKVYIDCTGDADVAAWAGAEYLKGDTQTGE 60 ++L AV+ + + A+I ++K GL A + KVYID TGD D+AAW+GA + +G + G Sbjct: 156 FSRLAAVEMSSDDTIDAIIVSNKAGLVAFKGKVYIDATGDGDLAAWSGASFKRGYDEEGS 215 Query: 61 MMPATHCFTLGNVDEYAYLNGPLLHS-NNKTSPIYDILKSGCYPLIPDAHICNNMIAPRT 119 + ++ CF+ N+D Y Y+NGP L+ ++++P+Y ++SG YPL+ D H CNN++ P Sbjct: 216 VQMSSLCFSFANIDSYDYINGPTLYVWKDESTPLYKAVRSGKYPLV-DTHFCNNLVGPDV 274 Query: 120 VGFNAGHLWEVDNTDAGSISEALMQGRKLAAAYRDALAEFIPASFGSSYVANTGSLLGVR 179 + NAGH+ VD TD +ISEA++ GR+ A Y +A+ + P++F +++V T SLLGVR Sbjct: 275 IQCNAGHM-TVDTTDPWAISEAMILGRQKAVQYLEAMKDVRPSTFSNAFVVKTASLLGVR 333 Query: 180 ETRRITGDYVLSVEDYVARRSFADEICRNSYFIDIHGTEKEEKQAGGKPEVIKRYGPGES 239 ++RRI GDY+ +VED+ R+SF DEI RN Y+ID+H + KPE Y GES Sbjct: 334 DSRRIEGDYIFTVEDWRQRKSFEDEIGRNCYYIDVHSGKH-------KPE---HYKKGES 383 Query: 240 HGIPYRCLTPRSLKNVLVAGRSISCVREVQGSVRVMPVCLXXXXXXXXXXXXXXXXXXXD 299 HGIPYRCLTP+ +KN+L AGR IS + GS RVMP CL D Sbjct: 384 HGIPYRCLTPKGIKNLLTAGRCISTDEQAFGSTRVMPCCLVTGEAAGMAAAHAIKQTRND 443 Query: 300 VHAVD 304 VH +D Sbjct: 444 VHKID 448 >B7B5G2.1 B7B5G2_9PORP Putative uncharacterized protein Length = 466 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 138/305 (45%), Positives = 189/305 (61%), Gaps = 11/305 (3%) Query: 1 MTQLGAVDTDDNGKVTALITASKNGLQALQAKVYIDCTGDADVAAWAGAEYLKGDTQTGE 60 T + AV+ G V A++ A+K GL +AKV+IDCTGD D+AAWAGA+++ GD ++G Sbjct: 159 FTTMAAVEMKRKGVVDAIVVANKAGLSTYKAKVFIDCTGDGDLAAWAGADFVMGD-ESGS 217 Query: 61 MMPATHCFTLGNVDEYAYLNGPLLHSNNKTSPIYDILKSGCYPLIPDAHICNNMIAPRTV 120 + T CFTL NVD Y + +H+N SPI+ I + YPL+ D H+ + +I P + Sbjct: 218 VQEGTLCFTLSNVDPYEFSLIGNVHTNRANSPIHSIYGNPKYPLVKDKHMNDKLIGPGFL 277 Query: 121 GFNAGHLWEVDNTDAGSISEALMQGRKLAAAYRDALAEFIPASFGSSYVANTGSLLGVRE 180 GFNAGH+ VD+TD S++EA+M+GRKLA + L EF P SFG+S++A+T +L+G+RE Sbjct: 278 GFNAGHV-TVDSTDPASLTEAMMKGRKLARQLHEGLVEFEPKSFGASFLASTANLMGIRE 336 Query: 181 TRRITGDYVLSVEDYVARRSFADEICRNSYFIDIHGTEKEEKQAGGKPEVIKRYGPGESH 240 +RRI DY ++ED++AR+ F D I RN Y+ID+H + V RY GESH Sbjct: 337 SRRIKCDYTFTLEDWLARKEFEDGIGRNCYYIDVHKQDA---------TVYPRYKKGESH 387 Query: 241 GIPYRCLTPRSLKNVLVAGRSISCVREVQGSVRVMPVCLXXXXXXXXXXXXXXXXXXXDV 300 GIP+ CLTP LKNV+VAGR IS GS+RVMP L D+ Sbjct: 388 GIPFSCLTPAGLKNVMVAGRCISTDSYAHGSLRVMPPSLVTGEAVGVAAGQICKSKSPDI 447 Query: 301 HAVDI 305 H VDI Sbjct: 448 HNVDI 452 >A7AIX6.1 A7AIX6_9PORP Putative uncharacterized protein Length = 459 Score = 267 bits (683), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 137/305 (44%), Positives = 188/305 (61%), Gaps = 11/305 (3%) Query: 1 MTQLGAVDTDDNGKVTALITASKNGLQALQAKVYIDCTGDADVAAWAGAEYLKGDTQTGE 60 T + AV+ G V A++ A+K GL +AKVYIDCTGD D+AAWAGA+++ GD ++G Sbjct: 152 FTTMAAVEMKRKGVVDAIVVANKAGLSTYKAKVYIDCTGDGDLAAWAGADFVIGD-ESGS 210 Query: 61 MMPATHCFTLGNVDEYAYLNGPLLHSNNKTSPIYDILKSGCYPLIPDAHICNNMIAPRTV 120 + T CFTL NVD Y + +H+N K PI+ I + YPL+ D H+ + +I P + Sbjct: 211 VQEGTLCFTLSNVDPYEFSLIGNVHTNRKDGPIHSIYGNPKYPLVKDKHMNDKLIGPGIL 270 Query: 121 GFNAGHLWEVDNTDAGSISEALMQGRKLAAAYRDALAEFIPASFGSSYVANTGSLLGVRE 180 GFNAGH+ VD+TD S++EA+++GRKL + L EF P SFG+S++A+T +L+G+RE Sbjct: 271 GFNAGHV-TVDSTDPVSLTEAMIKGRKLVRQLHEGLVEFEPKSFGASFLASTANLMGIRE 329 Query: 181 TRRITGDYVLSVEDYVARRSFADEICRNSYFIDIHGTEKEEKQAGGKPEVIKRYGPGESH 240 +RRI DY ++ED++AR+ F D I RN Y+ID+H + V RY GESH Sbjct: 330 SRRIKCDYTFTLEDWLARKEFEDSIGRNCYYIDVHKQDA---------TVYPRYKKGESH 380 Query: 241 GIPYRCLTPRSLKNVLVAGRSISCVREVQGSVRVMPVCLXXXXXXXXXXXXXXXXXXXDV 300 GIP+ CLTP LKNV+VAGR IS GS+RVMP L D+ Sbjct: 381 GIPFSCLTPAGLKNVMVAGRCISTDSYAHGSLRVMPPSLVTGEAVGVAAGQICKSKSPDI 440 Query: 301 HAVDI 305 H VDI Sbjct: 441 HNVDI 445 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,846,743,604 Number of extensions: 77130321 Number of successful extensions: 148419 Number of sequences better than 1.0e-05: 220 Number of HSP's gapped: 148133 Number of HSP's successfully gapped: 235 Length of query: 338 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 202 Effective length of database: 1,779,438,163 Effective search space: 359446508926 Effective search space used: 359446508926 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)