BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0571.0027.p
         (47 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KF76.1 B3KF76_9BACI Extracellular solute-binding protein family 1    59   2e-07
B1D5Y3.1 B1D5Y3_9BACL Extracellular solute-binding protein family 1    54   5e-06

>B3KF76.1 B3KF76_9BACI Extracellular solute-binding protein family 1
          Length = 504

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 36/46 (78%)

Query: 1   MINDFAVKVIVGEESTDAVAAFIEKYNAAGGEASSKEVNEWYASVK 46
           M+ D+ VK+I G ES D++A F  K+ +AGGEA+SKE+N+WYA+ K
Sbjct: 459 MVGDYTVKLIAGAESIDSLADFQSKFMSAGGEAASKEINDWYATTK 504


>B1D5Y3.1 B1D5Y3_9BACL Extracellular solute-binding protein family 1
          Length = 515

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/46 (50%), Positives = 31/46 (67%)

Query: 1   MINDFAVKVIVGEESTDAVAAFIEKYNAAGGEASSKEVNEWYASVK 46
           M  D+ VK+I G E  D +  F +KYNA G EAS+KE+N+WY + K
Sbjct: 470 MSGDYTVKLIAGSEKLDGLGDFQKKYNAEGAEASAKEINDWYKTTK 515


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.308    0.123    0.332 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 245,971,385
Number of extensions: 5521413
Number of successful extensions: 13964
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 13964
Number of HSP's successfully gapped: 2
Length of query: 47
Length of database: 3,060,696,203
Length adjustment: 20
Effective length of query: 27
Effective length of database: 2,872,275,903
Effective search space: 77551449381
Effective search space used: 77551449381
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 126 (53.1 bits)