BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0571.0026.p (464 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KF76.1 B3KF76_9BACI Extracellular solute-binding protein family 1 525 e-147 B1D5Y3.1 B1D5Y3_9BACL Extracellular solute-binding protein family 1 489 e-136 B3KFT1.1 B3KFT1_9BACI Extracellular solute-binding protein family 1 305 5e-81 A9KRV0.1 A9KRV0_CLOPH Extracellular solute-binding protein family 1 248 6e-64 B8I951.1 B8I951_CLOCE Extracellular solute-binding protein family 1 188 1e-45 >B3KF76.1 B3KF76_9BACI Extracellular solute-binding protein family 1 Length = 504 Score = 525 bits (1353), Expect = e-147, Method: Compositional matrix adjust. Identities = 251/443 (56%), Positives = 325/443 (73%), Gaps = 12/443 (2%) Query: 11 LVLCAGLAASIAGCGSSG-NTNKEGAAGGTAEQSAGAQTEGGSKPELKTLNIWSKDDYNT 69 + + A LA ++A C +G NT+ E A AE KP LK LN+W ++YN Sbjct: 11 MAMSALLAMTMAACSGNGTNTDNEATAKPDAE-----------KPALKRLNVWQNEEYNA 59 Query: 70 YKLAKVVEEQTGYKVKYEMLPADKAMDKLNLLISSAEPYDVITITGEKAAYTDYAKMGAL 129 Y +AK++EE+TGYKV+Y+MLP DK +KLNL++SS E YD++T + A Y+DYA+ GAL Sbjct: 60 YPVAKLLEEKTGYKVQYDMLPQDKWAEKLNLIMSSGEAYDIVTSYNDMALYSDYAQKGAL 119 Query: 130 VDLTPLIDKYGENIKASISPESFEAMKVDGKIYAIPNRTSEFVGSSLMIRTDWLDKLGLK 189 VDLTPLID++G NIKA+I PES EA+KV+GK+YAIP + + SS++IRTDWLDKLGL Sbjct: 120 VDLTPLIDEFGPNIKAAIKPESMEALKVNGKLYAIPVTVTYDINSSILIRTDWLDKLGLS 179 Query: 190 MPATLDELTAVLKAFKEKDPGGNGDKGAPLSIDGAQATMANVTGAFGIATGWSEVDGKLV 249 MP T +ELT VL FKEKDPGGNGD+ PL+I G Q+ + N+ GAFGI+ W++VDGKLV Sbjct: 180 MPTTTEELTNVLTQFKEKDPGGNGDRNVPLTIKGDQSMIDNLVGAFGISNTWNDVDGKLV 239 Query: 250 AAPLQPGFKEYLSYAADLYKQGLLDKEFAVNKDATLKEKFTSGRVGVIPLPWYDIPGIAD 309 + P FK+Y++Y +LY++GL+D+EF NKDAT KEKF SG G I + W DIP I+D Sbjct: 240 PRVMDPAFKDYVAYVGNLYEKGLIDREFVANKDATAKEKFASGVAGAIVVHWADIPAISD 299 Query: 310 ALTKNFPDAKYAYVPALKGKNGQAGLGMSGGFDRLTFIPKSSKHPEDAIKWINAKLDKDT 369 +L K P+AK+A+VPALKG NG+AG + GFDRLTFIPK+SKHPEDAIKWIN L+ +T Sbjct: 300 SLAKTKPEAKFAFVPALKGPNGEAGFAANAGFDRLTFIPKASKHPEDAIKWINESLEPET 359 Query: 370 FKLIAIGEEGKHFTYKDGVYSPILPLFTDERGLASNYLTGIDEKLYPVYWQARVQKDPRL 429 FK +AIG EG H+ DG Y PI P+FTDER LA+NY+ G DE+ YP YWQARV+K+P + Sbjct: 360 FKNMAIGVEGTHYKVVDGAYEPIQPIFTDERNLANNYMAGTDEENYPQYWQARVRKNPVM 419 Query: 430 FAGFTFLNSEIPAEYRISDPLAL 452 F F FLN+E PAE +I + L L Sbjct: 420 FDAFNFLNNEQPAEVKIKNVLGL 442 >B1D5Y3.1 B1D5Y3_9BACL Extracellular solute-binding protein family 1 Length = 515 Score = 489 bits (1259), Expect = e-136, Method: Compositional matrix adjust. Identities = 238/437 (54%), Positives = 315/437 (72%), Gaps = 1/437 (0%) Query: 17 LAASIAGCGSSGNTNKEGAAGGTAEQSAGAQTE-GGSKPELKTLNIWSKDDYNTYKLAKV 75 LA S+A C S+ N N A+ + + A TE GG+ P LK L+++ +DY Y +AK+ Sbjct: 17 LAGSLAACSSNNNGNDAAASNAPSASANTASTEPGGNLPTLKRLDVFQGEDYANYPVAKL 76 Query: 76 VEEQTGYKVKYEMLPADKAMDKLNLLISSAEPYDVITITGEKAAYTDYAKMGALVDLTPL 135 +EE+TGYKV+Y+MLP D KLNLL++S EPYD++T + A Y+DYAK GAL+DLTPL Sbjct: 77 LEEKTGYKVQYDMLPQDNPAQKLNLLMASGEPYDIVTSYIDMALYSDYAKKGALIDLTPL 136 Query: 136 IDKYGENIKASISPESFEAMKVDGKIYAIPNRTSEFVGSSLMIRTDWLDKLGLKMPATLD 195 ID++G NIK +IS +S +A+KVDGK+Y IPN + VG ++IRTDWLDK+GL+MP T Sbjct: 137 IDQFGPNIKNAISQQSMDALKVDGKLYGIPNIITYPVGFGILIRTDWLDKVGLQMPTTTG 196 Query: 196 ELTAVLKAFKEKDPGGNGDKGAPLSIDGAQATMANVTGAFGIATGWSEVDGKLVAAPLQP 255 E A L+AFK+KDPGGNG + P ++ G + ++ GAFG+ W+ VDG+LV L P Sbjct: 197 EFQAALQAFKDKDPGGNGSQNVPFTVKGDLPMIDDLVGAFGMPNPWNVVDGQLVPRVLDP 256 Query: 256 GFKEYLSYAADLYKQGLLDKEFAVNKDATLKEKFTSGRVGVIPLPWYDIPGIADALTKNF 315 F +Y+ Y + LY GLLDKEF VNKDAT KEKF+SG+ G I + W DIPGI+DAL K Sbjct: 257 AFPDYVKYVSGLYSGGLLDKEFVVNKDATAKEKFSSGKAGAIVVHWADIPGISDALAKAA 316 Query: 316 PDAKYAYVPALKGKNGQAGLGMSGGFDRLTFIPKSSKHPEDAIKWINAKLDKDTFKLIAI 375 PDAK+AYVPALKG NG++G G + GFDRL+F+PKSSKHPEDA+KWINA L+ TFK +AI Sbjct: 317 PDAKFAYVPALKGPNGKSGFGANQGFDRLSFVPKSSKHPEDAVKWINASLESATFKEVAI 376 Query: 376 GEEGKHFTYKDGVYSPILPLFTDERGLASNYLTGIDEKLYPVYWQARVQKDPRLFAGFTF 435 G EG H+T +G Y+PILP+F DER LA+NY+ G DE YP YWQARV+K+P +F F Sbjct: 377 GVEGTHYTVDNGSYNPILPIFNDERNLANNYMVGTDEANYPQYWQARVRKNPVMFEAFDT 436 Query: 436 LNSEIPAEYRISDPLAL 452 LN++ +I + L++ Sbjct: 437 LNNKTADSDKILNVLSV 453 >B3KFT1.1 B3KFT1_9BACI Extracellular solute-binding protein family 1 Length = 512 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 168/391 (42%), Positives = 238/391 (60%), Gaps = 10/391 (2%) Query: 45 GAQTEGGSKPELKTLNIWSKDDYNTYKLAKVVEEQTGYKVKYEMLPADKAMDKLNLLISS 104 G + KP L+ + + D T +AK ++E+TG+ V+YE+LPA+ A +KLNLL++ Sbjct: 50 GNKDTTAEKPGLRMIMQYGLFDPKTEYVAKYIQERTGFNVEYELLPAENADEKLNLLVTG 109 Query: 105 AEPYDVITITGEKAAYTDYAKMGALVDLTPLIDKYGENIKASISPESFEAMKVDGKIYAI 164 YD++ + + + + A GAL + L++ +G IK SI ESF + +DGKI+ I Sbjct: 110 KNNYDIVKLNAMQ--FYNLASAGALEPIDELLESHGNYIKQSIKQESFGSATIDGKIFGI 167 Query: 165 PNRTSEF-VGSSLMIRTDWLDKLGLKMPATLDELTAVLKAFKEKDPGGNGDKGAPLSI-D 222 P + +G +L++R DW+D+LGL P DEL VLK KEK PL++ + Sbjct: 168 PETGAGVSIGEALVVRQDWMDELGLATPTNTDELYNVLKTIKEKK------NVIPLTVSN 221 Query: 223 GAQATMANVTGAFGIATGWSEVDGKLVAAPLQPGFKEYLSYAADLYKQGLLDKEFAVNKD 282 A A N+ FG+ T W EVDGKLV P KEYL++ LYK+GLLD E +N Sbjct: 222 KAPAIYGNIAATFGVFTDWKEVDGKLVHRAELPEMKEYLTFMNKLYKEGLLDTETPINTA 281 Query: 283 ATLKEKFTSGRVGVIPLPWYDIPGIADALTKNFPDAKYAYVPALKGKNGQAGLGMSGGFD 342 EKF+ G+ + LPW+ +ALTKN P+AK + +P LKGK+G+A +G+ Sbjct: 282 QKSIEKFSGGKAAMYELPWWSAGTTIEALTKNSPEAKTSIIPYLKGKDGKAAIGVKTNTT 341 Query: 343 RLTFIPKSSKHPEDAIKWINAKLDKDTFKLIAIGEEGKHFTYKDGVYSPILPLFTDERGL 402 I KSSK+ E A+ ++NAKL+ +TFK IA+G+EG H KD Y PILP+F DE Sbjct: 342 WYVAILKSSKNKEAAMDFLNAKLEPETFKGIALGKEGVHHEVKDEKYYPILPIFNDELNN 401 Query: 403 ASNYLTGIDEKLYPVYWQARVQKDPRLFAGF 433 ASN+LTG+DE+ YP+YWQARV+KDP L A F Sbjct: 402 ASNFLTGVDEEKYPIYWQARVRKDPVLQAHF 432 >A9KRV0.1 A9KRV0_CLOPH Extracellular solute-binding protein family 1 Length = 522 Score = 248 bits (634), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 155/443 (34%), Positives = 241/443 (54%), Gaps = 26/443 (5%) Query: 6 RKWLSLVLCAGLAASI-AGCGSSGN--TNKEGAAGGTAEQSAGAQTEGGSK--------P 54 +K+L++ + + ASI GCG + TN+ G T + G Q GG K P Sbjct: 2 KKFLNVAISTIMVASILTGCGGKKDNVTNQTQTPGSTNSSANGEQ--GGQKKELDLTKKP 59 Query: 55 ELKTLNIWSKDDYNTYKLAKVVEEQTGYKVKYEMLPADKAMDKLNLLISSAEPYDVITIT 114 LK L ++ D T A +EE TGYKV+Y MLP++ ++ KLN +I+S E YD++ + Sbjct: 60 VLKVLLPYTGIDPQTDFTAVYLEEATGYKVEYYMLPSEDSISKLNTIIASKEEYDIMVLN 119 Query: 115 GEKAAYTDYAKMGALVDLTPLIDKYGENIKASISPESFEAMKVDGKIYAIPN-RTSEFVG 173 K + + GA L L+D+Y N++ S + + + G++ IP +E G Sbjct: 120 --KNDFDNTVDTGAYQPLNDLLDQYAPNVREKTSEGLWTNVTIGGEVKGIPEGLANENYG 177 Query: 174 SSLMIRTDWLDKLGL-KMPATLDELTAVLKAFKEKDPGGNGDKGAPLSIDGAQATMANVT 232 +R D+L K G+ KMP T DE KA K D+ + I + A + + Sbjct: 178 LVYRVRLDFLKKAGIDKMPETTDEFYNACKAMK--------DQFGIIPITASYAVIPEIA 229 Query: 233 GAFGIATGWSEVDGKLVAAPLQPGFKEYLSYAADLYKQGLLDKEFAVNKDATLKEKFTSG 292 AFG+ T ++ VD +++ L PG K+Y+ + L+++GLLD E+A N +KEKF S Sbjct: 230 SAFGMYTKFNVVDNQVLYQALVPGAKDYVEFMRKLFEEGLLDNEYAQNSGDMMKEKFFSN 289 Query: 293 RVGVIPLPWYDIPGIADALTKNFPDAKYAYVPALKGKNGQAGLGMSGGFDRLTFIPKSSK 352 + + W++ P ++ + + P+A+ AY+ ALK +G AGL M G +R+T IPK SK Sbjct: 290 KAAMYQTAWWNEPTASNTIMEKAPEAELAYLQALKSTDGTAGLPMGRGVNRVTVIPKVSK 349 Query: 353 HPEDAIKWINAKLDKDTFKLIAIGEEGKHFTYKDGVYSPILPLFTDERGLASNYLTGIDE 412 + E A+ +IN KL D FK+ ++GEE H+ Y PILP F D++ A ++ G D Sbjct: 350 NKEYALDYINTKLSDDIFKMASMGEENVHYKVAGDSYEPILPKFFDDKNNAHYFMMGSDT 409 Query: 413 KLYPVYWQA-RVQKDPRLFAGFT 434 K Y YW++ RV+KDP L+A F+ Sbjct: 410 KAYSKYWESTRVKKDPILYAEFS 432 >B8I951.1 B8I951_CLOCE Extracellular solute-binding protein family 1 Length = 525 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 147/441 (33%), Positives = 227/441 (51%), Gaps = 40/441 (9%) Query: 17 LAASIAGCGSSGNTNKEGAA-GGTAEQSAGAQTEGGSKPELKTLNIWSKDDYNTYKLAKV 75 + +S+A CG S N+ + GTA GA+ G KPELK L D NT +AK+ Sbjct: 14 IVSSLAACGQSSNSTPSNTSTAGTA---TGAKALDGEKPELKYLGYNVSFDPNTDGMAKI 70 Query: 76 VEEQTGYKVKYEMLPADKAMDKLNLLISSAEPYDVITITGEKAAYTDYAKMGALVDLTPL 135 EE+TGYKVKY +LPA+ A +KL + ++S YDVI ++ + + GAL L+ L Sbjct: 71 YEEKTGYKVKYNVLPAENADEKLLMEVASGADYDVIQVS--VSQFQTLLSQGALKPLSDL 128 Query: 136 IDKYGENIKASISPESFEAMK-VDGKIYAIPNR--TSEFVGSSLMIRTDWLDKLGL-KMP 191 +DKYG+++ ++ +S++A DGKIY IP + + + ++ R D + G+ ++P Sbjct: 129 LDKYGQDVLKGVNEDSWKACSGSDGKIYGIPYKYPYPTEITTFMVARMDLMKAAGINELP 188 Query: 192 ATLDELTAVLKAFKEKDPGGNGDKGAPLSIDGAQATMANV--------TGAFGIATGWS- 242 T+DE L K+ GDK + A+ A+V T AFGI W Sbjct: 189 KTIDEFYNTLVTLKK----FYGDKYIIFTGPFRAASEASVNWDIPQSITSAFGIYNDWMV 244 Query: 243 EVDGKLVAAPLQPGFKEYLSYAADLYKQGLLDKEFAVNKDATLKEKFTSG--------RV 294 + +GK+ F + + + L K+GL+D+++AVN T+ EK ++G RV Sbjct: 245 DENGKVYYMTEHKNFSKMIEFMQKLSKEGLIDRDWAVNNTTTVNEKLSAGKAIIAASNRV 304 Query: 295 GV-IPLPWYDIPGIADALTKNFPDAKYAYVPALKGKNGQAGLGMSGGFDRLTFIPKSSKH 353 GV + P I D L + Y+ AL G +G + +++T I KSSK+ Sbjct: 305 GVAVTTP---IMTGKDGL--GLKNEDLGYIGALAGSDGTCKYMKTEAINQVTCILKSSKN 359 Query: 354 PEDAIKWINAKLDKDTFKLIAIGEEGKHFTYK-DGVYSPILPLFTDERGLASNYLTGIDE 412 E I W+N K + + IG EG HFTY DG PI P+F++ERG + YL +E Sbjct: 360 AEHVINWVNVKQQNQLY--LNIGVEGTHFTYDADGSIKPINPIFSEERGNSYWYLNSTNE 417 Query: 413 KLYPVYWQARVQKDPRLFAGF 433 + + W +RV+K ++A F Sbjct: 418 EEFAKQWPSRVRKSDAMWAAF 438 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,921,157,577 Number of extensions: 131154441 Number of successful extensions: 311322 Number of sequences better than 1.0e-05: 610 Number of HSP's gapped: 310782 Number of HSP's successfully gapped: 611 Length of query: 464 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 325 Effective length of database: 1,751,175,118 Effective search space: 569131913350 Effective search space used: 569131913350 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 133 (55.8 bits)