BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0569.0027.p (767 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I225.1 B8I225_CLOCE AAA ATPase central domain protein 734 0.0 Q74EJ0.1 Q74EJ0_GEOSL ATPase, AAA family 521 e-145 B5WKF0.1 B5WKF0_9BURK AAA ATPase central domain protein 469 e-130 C0ZHS5.1 C0ZHS5_BREBN Putative uncharacterized protein 451 e-124 B2IYL8.1 B2IYL8_NOSP7 AAA ATPase, central domain protein EC=3.6.4.6 443 e-122 >B8I225.1 B8I225_CLOCE AAA ATPase central domain protein Length = 744 Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/737 (50%), Positives = 494/737 (67%), Gaps = 8/737 (1%) Query: 35 TLVLEASPGQESCEPAQPYTSNHEHLAEELQRLDLRLKLRMLEAPQ-----LDSELALMN 89 T + E +S + Y S+ E+L +EL RLDL L+ + + + L + + L Sbjct: 9 TDIPENQGNMDSNQKPIEYASSREYLLDELSRLDLVLRRFIRDDKEEGCTTLYAGVVLSK 68 Query: 90 EEIRSLLDAYSADEDDGNLLHVKLSMLEQRIAARLEASSGQEVQLMLPQVASLLNLSGLE 149 EEI LLD + + ++ +LS L+++IA RLEAS + LP ++ LL LS E Sbjct: 69 EEIYDLLDDKNTFAQETSI-EERLSELDEQIAKRLEASKACRRHISLPYLSRLLGLSLFE 127 Query: 150 VSILVACLAPELDRKYERIYAFLQNDMSDQRPTAGFVLGLFTGSVEERLAARLLFDVNAP 209 L+AC+APE+D KYE++Y + +ND S + P+ ++ +F + +ER+ AR LF + AP Sbjct: 128 QRCLIACMAPEIDPKYEKVYGYFENDTSIKNPSINLMMNIFLSTEDERIEARKLFSLQAP 187 Query: 210 LMKLLLERRGEYGDSRIPLIARPLKLEDWTVNMLLGYEVLDERLAKVASLSTLAIPQQAG 269 L++LLLE R + D+ IPLI+R LKL+DW VN LL +LD RL VA + Q Sbjct: 188 LVRLLLESRNDLSDNCIPLISRHLKLDDWVVNYLLDINILDSRLIHVAEMIQTGQRQNIS 247 Query: 270 FPEELEQSLLRFVKHYSSGKERRTGSLLYCSGPDEAGKLSGIREVCGKLGLSVLAADMDK 329 E +LRF+ +Y +G+ +R +LY GP+ AGK + VC LGL ++ D++K Sbjct: 248 ANTE-NVRILRFIDYYRNGRTKRN-QILYFYGPEGAGKKEYVLSVCEYLGLPLIVTDLEK 305 Query: 330 LLLPEANFSEXXXXXXXXXXXENTALCFTGFDSIVTEDDRHXXXXXXXXXXXXAYVPLTF 389 +L + F E LC F +V+++ + TF Sbjct: 306 ILSNDLPFDEILKLLGRQIKISGGILCLENFQLLVSDERSQQIRINRILQMLHEFSETTF 365 Query: 390 ILGEAQWGISLTGVQLNFMQIDLPVPDEAARKQAWTTFGQEYRLSPQMDLADFSGSFRFT 449 ILG QW ++ T + F+ ++ P P R++ W ++Y+L +++L +FS FRFT Sbjct: 366 ILGRTQWHLTNTDSRFAFIAVEYPYPSATERRKHWQELSKKYQLDEKLNLNNFSEVFRFT 425 Query: 450 SGQIRAALAGGENIAVWNGSSGAEVSVSDLYQACYFQSSRKIQALATKIRAMYTWDMLVL 509 GQI L GEN +VWNG S + V+DL ACY QS++K+ LA +I A+YT +MLVL Sbjct: 426 PGQIENVLKLGENYSVWNGYSDGRIEVNDLTNACYTQSNKKLGELAKRIEALYTMEMLVL 485 Query: 510 PGEQLSQLREICRQVKYRPLVYGEWGFAGRLSLGRGLNILFSGPPGSGKTMAAEVIATEL 569 P +Q+ Q++EICRQVKYR +VY +WGF RL+LG+GLNILFSGPPGSGKTMAAEVIA E+ Sbjct: 486 PEDQMLQMKEICRQVKYRSIVYEKWGFEKRLALGKGLNILFSGPPGSGKTMAAEVIANEI 545 Query: 570 NLEIYKIDVSQIVSKYIGETEKNLSRIFDEAETSNAILFFDEADALFGKRSEVKDAHDRY 629 LEIYKIDVS++VSKYIGETEKNL IF EAETSN ILFFDEADALFGKRSEVKD+HDRY Sbjct: 546 GLEIYKIDVSRVVSKYIGETEKNLGEIFHEAETSNVILFFDEADALFGKRSEVKDSHDRY 605 Query: 630 ANVEISYLLQKMEEYTGIVILATNLNQNLDDAFARRLHFKLEFPFPEKKQRGLIWRGMFP 689 ANVEI YLLQ+MEEY GIVILATNLNQN+D+AF RRLHF + FPFP+K+QR LIW +FP Sbjct: 606 ANVEIGYLLQRMEEYKGIVILATNLNQNIDEAFLRRLHFNIAFPFPDKEQRKLIWLSIFP 665 Query: 690 RGAPLDPDMDYDFMADKFILAGGNIKNIALNAAFYAAHEGCPIGMKQIMLAAKREYLKLG 749 GAP++ ++DYDF+A+KF++AGGNIKNIALNAAFYAAH GCPIG+KQIM AAKREY K+G Sbjct: 666 SGAPVEDNLDYDFLAEKFVMAGGNIKNIALNAAFYAAHAGCPIGIKQIMQAAKREYKKMG 725 Query: 750 RTFLQSDYAPYHKLIEV 766 +TFL+SD+ PY++LIEV Sbjct: 726 KTFLKSDFDPYYQLIEV 742 >Q74EJ0.1 Q74EJ0_GEOSL ATPase, AAA family Length = 743 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 296/734 (40%), Positives = 432/734 (58%), Gaps = 30/734 (4%) Query: 53 YTSNHEHLAEELQRLDLRLKLRMLEAPQLDSE-------LALMNEEIRSLLDAYSADEDD 105 Y E++ +EL+ LDL ++ R+ + ++ L L ++EI LL + Sbjct: 17 YADGPEYIQDELRWLDLLIRYRLDGRNRGGADPFGQLRGLVLSDDEINGLLSGDAGGTPG 76 Query: 106 GNL-LHVKLSMLEQRIAARLEASSGQEVQLMLPQVASLLNLSGLEVSILVACLAPELDRK 164 + +L+ L +A R A+ L L ++ +LS E L+ CLAPELD K Sbjct: 77 ASPECGAELAELAAEVADRRSATLRMGTALPLADLSRTFHLSPFEEKCLLICLAPELDPK 136 Query: 165 YERIYAFLQNDMSDQRPTAGFVLGLFTGSVEERLAARLLFDVNAPLMKL-LLERRGEYGD 223 YE++YA+L +D++ +RP+ G +L L S ER+AAR +FD APL K L++ D Sbjct: 137 YEKLYAYLHDDVTRRRPSIGLILDLLCTSFRERVAARTVFDPRAPLTKYRLVQFIQATPD 196 Query: 224 SRIPLIARPLKLEDWTVNMLLGYEVLDERLAKVASLSTLAIPQQAGFPEELE-------Q 276 + +R L L +LG+ D LA+ L +P G +E + Sbjct: 197 GPVSFPSRQLMLNGRIAGYVLGHAQPDPHLAEAVRL---VLPGPGGTVSPVEDRNRERAR 253 Query: 277 SLLR-FVKHYSSGKERRTGSLLYCSGPDEAGKLSGIREVCGKLGLSVLAADMDKLLLPEA 335 L+R + ++SG+ R +L+C GP AGK + +C LGL +L AD++++L Sbjct: 254 QLVRAHLAVHASGESR---LVLFCRGPRGAGKRELVESLCRDLGLWLLVADVERMLAGSL 310 Query: 336 NFSEXXXXXXXXXXXENTALCFTGFDSIVTEDDRHXXXXXXXXXXXXAYVPLTFILGEAQ 395 F E + +C G D+++ D+ H + +TF+ Sbjct: 311 PFGEMAWLLGREAALQPAVVCLEGMDALLAGDNDHTSELTSLMDAIRTFCRVTFVCSGRP 370 Query: 396 WGISLTGVQLNFMQIDLPVPDEAARKQAWTTFGQEYRLSPQMDLAD-FSGSFRFTSGQIR 454 W F+++D P+PDE RK+ W L+ M AD +G+FRFT GQIR Sbjct: 371 WRPRDRHPSDVFIELDFPLPDEGTRKRLWEDGLSGSPLAAGMGAADVLAGTFRFTPGQIR 430 Query: 455 AALAGGENIAVWNG----SSGAEVSVSDLYQACYFQSSRKIQALATKIRAMYTWDMLVLP 510 ALA ++AVW+G S G+E + L+ AC +S ++ LA ++ ++T D +VLP Sbjct: 431 QALADARDLAVWHGGDEASGGSEADL--LHAACRARSHTRLGTLARRLEPVHTLDDIVLP 488 Query: 511 GEQLSQLREICRQVKYRPLVYGEWGFAGRLSLGRGLNILFSGPPGSGKTMAAEVIATELN 570 Q++QLREIC QV+YR LV+G+WGF +LS G+GL +LF+GPPG+GKTMAA VIA EL Sbjct: 489 ALQMAQLREICAQVRYRHLVFGQWGFDRKLSSGKGLTVLFTGPPGTGKTMAAAVIARELG 548 Query: 571 LEIYKIDVSQIVSKYIGETEKNLSRIFDEAETSNAILFFDEADALFGKRSEVKDAHDRYA 630 LE+Y+ID+SQ+VSKYIGETEKNL RIF EAET+ AILFFDEADALFG+RSEVKDAHDRYA Sbjct: 549 LELYRIDLSQVVSKYIGETEKNLERIFAEAETAGAILFFDEADALFGRRSEVKDAHDRYA 608 Query: 631 NVEISYLLQKMEEYTGIVILATNLNQNLDDAFARRLHFKLEFPFPEKKQRGLIWRGMFPR 690 N+EI YLLQ+MEEY+GI ILATNL QNLD+AF RR+ +EFPFP+++ R +IW+ +FP Sbjct: 609 NIEIGYLLQRMEEYSGISILATNLRQNLDEAFTRRIRIVVEFPFPDEEYREMIWQRIFPP 668 Query: 691 GAPLDPDMDYDFMADKFILAGGNIKNIALNAAFYAAHEGCPIGMKQIMLAAKREYLKLGR 750 P+ D+D F+A +F ++GG+I+N+AL A F+AA EG P+ M ++ A RE K G+ Sbjct: 669 ELPVGDDVDLGFLARRFRISGGDIRNVALGAVFFAAEEGRPLAMAHLVRALGRELRKTGK 728 Query: 751 TFLQSDYAPYHKLI 764 + ++ Y +++ Sbjct: 729 PCTREEFGDYLEML 742 >B5WKF0.1 B5WKF0_9BURK AAA ATPase central domain protein Length = 730 Score = 469 bits (1207), Expect = e-130, Method: Compositional matrix adjust. Identities = 280/725 (38%), Positives = 407/725 (56%), Gaps = 41/725 (5%) Query: 53 YTSNHEHLAEELQRLDLRLKLRMLEAPQLDSELALMNEEIRSLLDAYSADEDDGNLLHVK 112 Y S+ EHL L+++DL+++ ++ + E +E+ R L Y +++ LL Sbjct: 6 YESSLEHLLARLEQIDLKIRAQVARFRSMQRE----DEQFRGL---YVSEQQVDALLAAP 58 Query: 113 LSM----LEQ------------RIAARLEASSGQEVQLMLPQVASLLNLSGLEVSILVAC 156 L+M LEQ RIA A+ +L L ++A++ +L L++ IL+ C Sbjct: 59 LAMPAWLLEQSPNAEHHTAIARRIAEHESATIEAGTELRLARLATMFSLDPLDIDILLVC 118 Query: 157 LAPELDRKYERIYAFLQNDMSDQRPTAGFVLGLFTGSVEERLAARLLFDVNAPLMKL-LL 215 LA ELD +YE++YA+LQ+D++ RP+ VL L +R+AAR F +APL + L+ Sbjct: 119 LAAELDTRYEKLYAYLQDDVTRTRPSIDLVLALLVPDPMQRIAAREHFIADAPLRRARLI 178 Query: 216 ERRGEYGDSRIPLIARPLKLEDWTVNMLLGYEVLDERLAKVASLSTLAIPQQAGFPEELE 275 E + P I + L++++ V+ LLG D R+A P+ L Sbjct: 179 EVFEDASRPSPPFIGKLLRIDERIVSYLLGSNAPDARIAPYLRDEA---PRHGLDELVLP 235 Query: 276 QSLLRFVKHYSSGKERRTGSLLYCSGPDEAGKLSGIREVCGKLGLSVLAADMDKLLLPEA 335 S L +K + K R ++ GP AGKL+ R VC + G L D LLL +A Sbjct: 236 ASTLHGLKTLAHQKARDLAIAVHLQGPAGAGKLTVARAVCRERGARFLCVDA-SLLLADA 294 Query: 336 --NFSEXXXXXXXXXXXENTALCFTGFDSIVTEDDRHXXXXXXXXXXXXAYVPLTFILGE 393 N + + AL GFD+++ + RH V L+F+ GE Sbjct: 295 DINLNTQFALIAREARLADAALYIDGFDALLAHE-RHAALRACLDAVEE--VALSFLAGE 351 Query: 394 AQWGISLTGVQLNFMQIDLPVPDEAARKQAWTTFGQEYRLSPQ-MDLADFSGSFRFTSGQ 452 W ++ F + L PD R+ W Q + +P +DL + FRFT GQ Sbjct: 352 VSWLPGSALRRVRFFAVSLARPDIPEREHLWRKTAQAHGAAPDALDLEGVATKFRFTPGQ 411 Query: 453 IRAALAGGENIAVWNGSS-------GAEVSVSDLYQACYFQSSRKIQALATKIRAMYTWD 505 I + ++A W ++ DLY AC S+R + ALA KI +TW Sbjct: 412 IDDSWRSAMSLATWRAKDTKDSEDGSGNITSQDLYDACRLNSNRALTALAQKITPRFTWK 471 Query: 506 MLVLPGEQLSQLREICRQVKYRPLVYGEWGFAGRLSLGRGLNILFSGPPGSGKTMAAEVI 565 +VLP +++ QLREIC VKYR V+ EWGF +++ +GL LF+GP G+GKTMAA +I Sbjct: 472 DIVLPADRIEQLREICNHVKYRNRVFNEWGFEQKIASSKGLTFLFAGPSGTGKTMAAGII 531 Query: 566 ATELNLEIYKIDVSQIVSKYIGETEKNLSRIFDEAETSNAILFFDEADALFGKRSEVKDA 625 A EL L++YKID+S ++SK+IGETEKNL+RIFDEAET+NAILFFDEAD+LFGKRS+VKD+ Sbjct: 532 ANELGLDLYKIDLSLVISKFIGETEKNLARIFDEAETANAILFFDEADSLFGKRSDVKDS 591 Query: 626 HDRYANVEISYLLQKMEEYTGIVILATNLNQNLDDAFARRLHFKLEFPFPEKKQRGLIWR 685 HDRYAN+E+ YLLQ++EEY GI ILATN +N+D+AF RRL F ++FP P + R +W Sbjct: 592 HDRYANIEVGYLLQRIEEYQGIAILATNFRRNMDEAFVRRLQFTVDFPLPTESDRHRMWI 651 Query: 686 GMFPRGAPLDPDMDYDFMADKFILAGGNIKNIALNAAFYAAHEGCPIGMKQIMLAAKREY 745 + P P DP++D MA ++ L+GGNI+N+AL AAF AA +G I M ++ A +REY Sbjct: 652 AILPEHTPRDPNLDLTLMARRYNLSGGNIRNVALAAAFLAADDGDMIRMSHLIFATQREY 711 Query: 746 LKLGR 750 K+G+ Sbjct: 712 QKMGK 716 >C0ZHS5.1 C0ZHS5_BREBN Putative uncharacterized protein Length = 718 Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust. Identities = 262/706 (37%), Positives = 400/706 (56%), Gaps = 23/706 (3%) Query: 51 QPYTSNHEHLAEELQRLDLRLKLRMLEAPQLDSE---------LALMNEEIRSLLDAYSA 101 +P + + E L+ LD+ L +R+L E + + EE+ LL+A Sbjct: 5 EPNHNQWNYYEEMLRWLDIHL-MRLLAVRAQQGEDYPLDQMRGVIVTEEEVVQLLEAAPP 63 Query: 102 DEDDGNLLHVKLSMLEQRIAARLEASSGQEVQLMLPQVASLLNLSGLEVSILVACLAPEL 161 + +L+ E+R+ A L + +++ VA +L+ E+ L CL+ EL Sbjct: 64 ATQLWDAFAERLAACEERLHA-LHIQEAGSIPILV--VADAFSLNRFELGCLFLCLSVEL 120 Query: 162 DRKYERIYAFLQNDMSDQRPTAGFVLGLFTGSVEERLAARLLFDVNAPLMKLLLERRGEY 221 DRKYE+++ +L +D++ + PT + LF + ER+ F + L +LLL G+ Sbjct: 121 DRKYEKLFGYLLDDITCKSPTPELAMQLFCRTATERIEVWTTFAQKSKLGRLLLFTEGDM 180 Query: 222 GDSRIPLIARPLKLEDWTVNMLLGYEVLDERLAKVASLSTLAIPQQAGFPEELEQSLL-- 279 G S ++RPLKL++ ++ L + D L S S +P Q P E ++ Sbjct: 181 GGSG-SWLSRPLKLDERLLHFLTTRDGGDASLPPWLSWS---LPDQGLEPLVGESAIHLQ 236 Query: 280 -RFVKHYSSGKERRTGSLLYCSGPDEAGKLSGIREVCGKLGLSVLAADMDKLLLPEANFS 338 RF + + LL+ GP GK ++ + ++ VL D ++L+ EA FS Sbjct: 237 ERFDTLWETAGADSNRLLLHLHGPTGVGKRHRVKHLFHRVRRPVLFVDAERLIREEA-FS 295 Query: 339 EXXXXXXXXXXXENTALCFTGFDSIVTEDDRHXXXXXXXXXXXXAYVPLTFILGEAQWGI 398 LC F+ +TE+ + ++ I+ ++QW Sbjct: 296 RRLQQVLREVQLLRGVLCLHQFEVFLTEEVQTVGRKQLVMDELESFSGPIAIVAKSQWKP 355 Query: 399 SLTGVQLNFMQIDLPVPDEAARKQAWTTFGQEYRLSPQMDLADFSGSFRFTSGQIRAALA 458 + ++++++P PDE R++ W T S ++D+ +G F+ +GQI AL Sbjct: 356 ENALGKRIWLEMEVPSPDETERRRLWETGRVGMSFSQEIDVGVLAGKFKLNAGQINQALH 415 Query: 459 GGENIAVWNGSSGAEVSVSDLYQACYFQSSRKIQALATKIRAMYTWDMLVLPGEQLSQLR 518 +A+ + ++ + L++AC+ Q ++ AT++R Y+W+ L+LP EQL+ LR Sbjct: 416 RANEMAM--QTKDGIITKTHLHEACFLQMRHALEKHATRLRPKYSWEDLILPEEQLTLLR 473 Query: 519 EICRQVKYRPLVYGEWGFAGRLSLGRGLNILFSGPPGSGKTMAAEVIATELNLEIYKIDV 578 C QV YR +V GEWGF +LS G+G+++LF+GPPG+GKTM+AEV+A EL LE++KID+ Sbjct: 474 NACNQVTYRNVVLGEWGFGRKLSYGKGVSMLFAGPPGTGKTMSAEVVAKELGLELFKIDL 533 Query: 579 SQIVSKYIGETEKNLSRIFDEAETSNAILFFDEADALFGKRSEVKDAHDRYANVEISYLL 638 SQ++SKYIGETEKNL IF EA+ NAILFFDEADALFGKRSEVKD+HD+YANVE +YLL Sbjct: 534 SQVISKYIGETEKNLHHIFSEAKIGNAILFFDEADALFGKRSEVKDSHDKYANVETAYLL 593 Query: 639 QKMEEYTGIVILATNLNQNLDDAFARRLHFKLEFPFPEKKQRGLIWRGMFPRGAPLDPDM 698 QKMEEY G+ ILATNL QN D+AF RR+++ ++FPFPE R IWR MFP P D+ Sbjct: 594 QKMEEYEGVSILATNLLQNFDEAFMRRINYVVKFPFPEPYYREEIWRSMFPADTPRAADI 653 Query: 699 DYDFMADKFILAGGNIKNIALNAAFYAAHEGCPIGMKQIMLAAKRE 744 D++F+A K +AGG IKN+ L A+F AA EG P+ M+ ++ AAK+E Sbjct: 654 DFEFLASKLHIAGGGIKNVVLAASFLAASEGTPVSMRHLIEAAKQE 699 >B2IYL8.1 B2IYL8_NOSP7 AAA ATPase, central domain protein EC=3.6.4.6 Length = 742 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 261/642 (40%), Positives = 358/642 (55%), Gaps = 24/642 (3%) Query: 135 MLPQVASLLNLSGLEVSILVACLAPELDRKYERIYAFLQNDMSDQRPTAGFVLGLFTGSV 194 +L + + +LS ++ IL LAPELDR YER+YA+LQ+DMS+++PT VL L SV Sbjct: 105 LLAWLQNTFSLSSFDLDILAIALAPELDRHYERVYAYLQDDMSNKKPTVDMVLNLLCSSV 164 Query: 195 EERLAARLLFDVNAPLM-KLLLERRGEYGDSRIPLIARPLKLEDWTVNMLLGYEVLDERL 253 E+L+ R F N+PL+ LL E + L++ L L+ V +LL LD RL Sbjct: 165 PEKLSRRKHFTTNSPLIYHRLLHLCPESHQQQSTLLSHHLILDSQVVRLLLHQPGLDSRL 224 Query: 254 AKVASLSTLAIPQQAGFPEELEQSLLRFVKHYSSGKERRTGSLLYCSGPDEAGKLSGIRE 313 L I + + Q+ L + +++ LLY G D G G+R Sbjct: 225 TSCCQLLEPTIYFDTLYLKADVQTALEAL--LIEDWQKQQPLLLYFQGTDACG---GLRL 279 Query: 314 VCGK----------LGLSVLAADMDKLLLPEANFSEXXXXXXXXXXXENTALCFTGFDSI 363 GK L + +L D+ KL+ +ANF E N L FD + Sbjct: 280 RTGKRRTAQILAKTLEVPLLVVDLAKLVEDKANFEEKLQLLWREAWFFNRLLYLDNFDIL 339 Query: 364 VTEDDRHXXXXXXXXXXXXAYVPLTFILGEAQWGISLTGVQLNFMQIDLPVPDEAARKQA 423 ++ H + +T + G W + TG + + VP+ + R++ Sbjct: 340 YLQE--HQILYQSFLRELEKNIGITILSGVKNWIPTATGAT-GLITVPFTVPESSQRREC 396 Query: 424 WTTFGQEYRLSPQ-MDLADFSGSFRFTSGQIRAALAGGENIAVWNGSSGAE----VSVSD 478 W T + ++ + +L F T QI A+A N A W + S + Sbjct: 397 WQTHLKAAHITLEDRELDVLCDRFLLTPDQIADAVATAYNTARWQQIDSTQEKPLPSFLN 456 Query: 479 LYQACYFQSSRKIQALATKIRAMYTWDMLVLPGEQLSQLREICRQVKYRPLVYGEWGFAG 538 L A QS + LA KI YTWD +VL Q++QL++IC++ +YR LV+ +WGFA Sbjct: 457 LCSAARAQSGHDLATLARKIEPKYTWDDIVLHPNQITQLKDICKEAEYRNLVHQKWGFAD 516 Query: 539 RLSLGRGLNILFSGPPGSGKTMAAEVIATELNLEIYKIDVSQIVSKYIGETEKNLSRIFD 598 +LSLG+GLN+LFSG G+GKTMAAEVIA +L L++YKID+SQIVSKYIGETEKNL+RIF Sbjct: 517 KLSLGKGLNVLFSGSSGTGKTMAAEVIAHQLQLDLYKIDLSQIVSKYIGETEKNLNRIFT 576 Query: 599 EAETSNAILFFDEADALFGKRSEVKDAHDRYANVEISYLLQKMEEYTGIVILATNLNQNL 658 A SNAILFFDEADALFGKRSEV+DA DRYAN+E+ YLLQKMEEY GI IL TNL N+ Sbjct: 577 AATNSNAILFFDEADALFGKRSEVQDARDRYANIEVGYLLQKMEEYEGIAILTTNLRNNI 636 Query: 659 DDAFARRLHFKLEFPFPEKKQRGLIWRGMFPRGAPLDPDMDYDFMADKFILAGGNIKNIA 718 D+AF RRL F +EF P+ K R IW+ +FP+ AP P++D + +A F + G NI+ IA Sbjct: 637 DEAFERRLRFIIEFTLPDTKNRHSIWQRIFPKNAPCSPNLDLELLAQNFEITGANIRYIA 696 Query: 719 LNAAFYAAHEGCPIGMKQIMLAAKREYLKLGRTFLQSDYAPY 760 L AAF AA +G I M ++ A +REY K+G+ D Y Sbjct: 697 LTAAFLAADDGGVIEMVHLIRALRREYQKMGQVLRDKDLGQY 738 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,274,833,660 Number of extensions: 176580984 Number of successful extensions: 559501 Number of sequences better than 1.0e-05: 6906 Number of HSP's gapped: 553522 Number of HSP's successfully gapped: 7502 Length of query: 767 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 623 Effective length of database: 1,704,070,043 Effective search space: 1061635636789 Effective search space used: 1061635636789 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)