BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0569.0026.p
         (190 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B8I226.1 B8I226_CLOCE Putative uncharacterized protein                262   1e-68
Q2W639.1 Q2W639_MAGMM Putative uncharacterized protein                 83   1e-14

>B8I226.1 B8I226_CLOCE Putative uncharacterized protein
          Length = 202

 Score =  262 bits (669), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 126/180 (70%), Positives = 146/180 (81%)

Query: 1   MAVDTGTVIRDVSTSLKALLKANVPELNDDSFISFGSPSDIDSSTMKLSMCLYYLSHSPS 60
           MAV+T TVIRDVS SLKAL+KANVPELNDDS+I+FGSPSD+DS+TM LS+CLYYL+ S S
Sbjct: 1   MAVETRTVIRDVSASLKALIKANVPELNDDSYITFGSPSDVDSATMTLSLCLYYLTESHS 60

Query: 61  MRNSEKEEIGGTNEFXXXXXXXXXXXXXXXXAKDRETEQLILGRIFQLFHEHPVLSGSDL 120
           MRNSE+E I GTN+                 AKDR+TE LILG++FQLFHEH VLSG DL
Sbjct: 61  MRNSERERIPGTNQLFDPPSYLDLYYLMTPYAKDRDTELLILGKLFQLFHEHAVLSGDDL 120

Query: 121 RGNLAECGNEKIRISYNNLTIQDIKQLWEVFPGKPAKVSLSYLVSPVRLPADKKIIIPRV 180
           +GNLA CGNE IRISYNNL++QDIKQLWEVFPGKPAK+SLSYLVS VR+PA+K I  P +
Sbjct: 121 KGNLAVCGNEHIRISYNNLSLQDIKQLWEVFPGKPAKLSLSYLVSAVRMPAEKIITFPLI 180


>Q2W639.1 Q2W639_MAGMM Putative uncharacterized protein
          Length = 213

 Score = 82.8 bits (203), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 9/180 (5%)

Query: 1   MAVDTGTVIRDVSTSLKALLKANVPELNDDSFISFGSPSDIDSSTM-KLSMCLYYLSHSP 59
           MA D G VI  +S SL  L++ ++PEL  +S + F SP+++D     +LS+ LY +  +P
Sbjct: 8   MAADDGQVILKISQSLARLIRGSIPELQAESAVVFDSPAEMDGHEQNRLSLYLYQIEINP 67

Query: 60  SMRNS----EKEEIGGTNEFXXXXXXXXXXX----XXXXXAKDRETEQLILGRIFQLFHE 111
            +RN      +   G                          +  E E +++ ++ +LFH+
Sbjct: 68  WLRNQPGTLTRRPAGAGQPAGLVRQAPALPVDLIYMMVPYGRSSEIELVLINKLVRLFHD 127

Query: 112 HPVLSGSDLRGNLAECGNEKIRISYNNLTIQDIKQLWEVFPGKPAKVSLSYLVSPVRLPA 171
            P L G  L   +   GN+ I I     +   ++ LW  FPGK  K++  Y +SPV+LP+
Sbjct: 128 VPALEGPLLDPAVRALGNQSIAIVPQEESQHQMRDLWAGFPGKSYKITRLYRLSPVQLPS 187


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.135    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,010,558,525
Number of extensions: 35782243
Number of successful extensions: 73634
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 73637
Number of HSP's successfully gapped: 2
Length of query: 190
Length of database: 3,060,696,203
Length adjustment: 128
Effective length of query: 62
Effective length of database: 1,854,806,283
Effective search space: 114997989546
Effective search space used: 114997989546
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 127 (53.5 bits)