BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0569.0023.p (147 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I228.1 B8I228_CLOCE Putative uncharacterized protein 260 4e-68 Q74EI6.1 Q74EI6_GEOSL Putative uncharacterized protein 179 1e-43 B5WTJ4.1 B5WTJ4_9BURK Conserved hypothetical phage tail protein 153 6e-36 Q2W636.1 Q2W636_MAGMM Putative uncharacterized protein 150 5e-35 Q988X7.1 Q988X7_RHILO Mlr6550 protein 150 5e-35 >B8I228.1 B8I228_CLOCE Putative uncharacterized protein Length = 147 Score = 260 bits (664), Expect = 4e-68, Method: Compositional matrix adjust. Identities = 120/147 (81%), Positives = 136/147 (92%) Query: 1 MATGKRLDPYRNYRFRVVIDGIQTAAFADATIPDTSTEAVDYREGIDAPHARKLSGLTKF 60 MATGKR DPYRN+RFRVVIDGIQ AAF+DATIPD +TEAV+YREG DAPH+RKLSGLTKF Sbjct: 1 MATGKRNDPYRNFRFRVVIDGIQIAAFSDATIPDITTEAVEYREGTDAPHSRKLSGLTKF 60 Query: 61 GNITLKKGLTDSLELYNWRKSIEDKGALKNRKSLSIILVDEEGNDKAQWDILEAWPIKYD 120 GN+TLK+GLTDS++LYNWRK++ KGAL NR+SLSIILVDEEGNDKAQWDI+EAWPIKYD Sbjct: 61 GNVTLKRGLTDSMDLYNWRKAVVQKGALNNRRSLSIILVDEEGNDKAQWDIIEAWPIKYD 120 Query: 121 VSALSAKGNEVSVESMELVHEGVRRVK 147 VSALSAKGNEVS+E+ E HEGV RV+ Sbjct: 121 VSALSAKGNEVSIENTEFAHEGVSRVR 147 >Q74EI6.1 Q74EI6_GEOSL Putative uncharacterized protein Length = 145 Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 84/142 (59%), Positives = 113/142 (79%), Gaps = 2/142 (1%) Query: 6 RLDPYRNYRFRVVIDGIQTAAFADATIPDTSTEAVDYREGIDAPHARKLSGLTKFGNITL 65 R DPYRN+RF V IDGI A F++ T+PDTST+ V+YREG + P RKLSGL KFGN+TL Sbjct: 4 RKDPYRNFRFLVEIDGIVQAGFSEVTVPDTSTDVVEYREGSEEPRLRKLSGLNKFGNVTL 63 Query: 66 KKGLTDSLELYNWRKSIEDKGALKN-RKSLSIILVDEEGNDKAQWDILEAWPIKYDVSAL 124 K G TDSLE +NWRK + +G +K+ RK++++IL+DEEGN A+W+ AWP KYD + L Sbjct: 64 KWGTTDSLEFFNWRKLVM-QGKMKDARKNMAVILMDEEGNPAARWEFENAWPNKYDPADL 122 Query: 125 SAKGNEVSVESMELVHEGVRRV 146 +AKGN+V++ES+E+VHEG++RV Sbjct: 123 NAKGNDVAIESVEIVHEGMKRV 144 >B5WTJ4.1 B5WTJ4_9BURK Conserved hypothetical phage tail protein Length = 148 Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust. Identities = 73/148 (49%), Positives = 103/148 (69%), Gaps = 1/148 (0%) Query: 1 MATGKRLDPYRNYRFRVVIDGIQTAAFADATIPDTSTEAVDYREGIDAPHA-RKLSGLTK 59 MATG+R DP+R ++FRV I GIQ A F + + D +T+++DYREG D KL GL K Sbjct: 1 MATGERRDPFRGFKFRVQIGGIQRAGFREVSGLDAATDSIDYREGDDKTLTIHKLPGLKK 60 Query: 60 FGNITLKKGLTDSLELYNWRKSIEDKGALKNRKSLSIILVDEEGNDKAQWDILEAWPIKY 119 F NITLK+G+T+ L+L+ WRK + D + R++ SIIL+D+EGND AQWD + AWP K+ Sbjct: 61 FANITLKRGITNDLDLWKWRKQVMDGKIKEARQNGSIILMDDEGNDVAQWDFVAAWPTKW 120 Query: 120 DVSALSAKGNEVSVESMELVHEGVRRVK 147 +A NEV+++++EL HEG+ R K Sbjct: 121 TGPGFNATANEVAIDTIELTHEGLDRTK 148 >Q2W636.1 Q2W636_MAGMM Putative uncharacterized protein Length = 147 Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 67/142 (47%), Positives = 108/142 (76%), Gaps = 2/142 (1%) Query: 8 DPYRNYRFRVVIDGIQTAAFADATIPDTSTEAVDYREGIDAPHARKLSGLTKFGNITLKK 67 DPYR +RFR+ I GIQ AAFA+ATIPD + ++VDYREG D + R LSGL+ +G ++LK+ Sbjct: 6 DPYRGFRFRIEISGIQIAAFAEATIPDITIDSVDYREGTDPIYKRPLSGLSSYGRLSLKR 65 Query: 68 GLTDSLELYNWRKSIEDKGA--LKNRKSLSIILVDEEGNDKAQWDILEAWPIKYDVSALS 125 GLTDS +LY+W++ + +G+ ++K++S+IL+ +G+DK++W+++ AWP KY+ + L+ Sbjct: 66 GLTDSTDLYDWQQLVLKQGSDGKGSQKNVSLILMGTDGSDKSRWNVISAWPTKYETAGLN 125 Query: 126 AKGNEVSVESMELVHEGVRRVK 147 A ++V VE++EL + + RVK Sbjct: 126 ASSSDVVVETLELAMDYMVRVK 147 >Q988X7.1 Q988X7_RHILO Mlr6550 protein Length = 149 Score = 150 bits (378), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 75/146 (51%), Positives = 103/146 (70%), Gaps = 4/146 (2%) Query: 6 RLDPYRNYRFRVVIDGIQTAAFADATIPDTSTEAVDYREGIDAPHARKLSGLTKFGNITL 65 R+DP RN+RF + ID + A F++ I +T+ EAVDYREG D PH RKLSGLTK+G+ITL Sbjct: 4 RIDPIRNFRFLLEIDNVTRAGFSEVAIAETTIEAVDYREGTDPPHMRKLSGLTKYGSITL 63 Query: 66 KKGLT---DSLELYNWRKSIEDKGALKNRKSLSIILVDEEG-NDKAQWDILEAWPIKYDV 121 K G+T +SLEL+ W + + R++++I + DE G ++A++ I EAWPIKYD Sbjct: 64 KAGMTTDANSLELFKWHNDVSVGLISERRRNIAISVRDESGKTEQARFVISEAWPIKYDP 123 Query: 122 SALSAKGNEVSVESMELVHEGVRRVK 147 S LS KGNEV +E +EL +EG+ RVK Sbjct: 124 SDLSGKGNEVMIELLELANEGIERVK 149 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 828,816,220 Number of extensions: 31417309 Number of successful extensions: 58861 Number of sequences better than 1.0e-05: 151 Number of HSP's gapped: 58779 Number of HSP's successfully gapped: 151 Length of query: 147 Length of database: 3,060,696,203 Length adjustment: 110 Effective length of query: 37 Effective length of database: 2,024,384,553 Effective search space: 74902228461 Effective search space used: 74902228461 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 125 (52.8 bits)