BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0569.0008.p
         (65 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B2IZJ4.1 B2IZJ4_NOSP7 Putative uncharacterized protein                 62   2e-08
B8I242.1 B8I242_CLOCE Putative uncharacterized protein                 61   3e-08
B8I244.1 B8I244_CLOCE Putative uncharacterized protein                 59   1e-07
A9B7Q3.1 A9B7Q3_HERA2 Putative uncharacterized protein                 54   3e-06

>B2IZJ4.1 B2IZJ4_NOSP7 Putative uncharacterized protein
          Length = 77

 Score = 61.6 bits (148), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/56 (55%), Positives = 45/56 (80%)

Query: 6  MKEQLEARMNELKAELESGRQMMQELDEKRSNLGYAMTRISGAIQVLEELSAGEEE 61
          MKEQLE R+ ELKAEL SG+++M +L+ K++NL   + RISGAIQ+LEEL++  ++
Sbjct: 1  MKEQLEKRLTELKAELVSGQKVMADLEAKQANLRDTLLRISGAIQILEELTSSTKQ 56


>B8I242.1 B8I242_CLOCE Putative uncharacterized protein
          Length = 58

 Score = 61.2 bits (147), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 42/50 (84%)

Query: 6  MKEQLEARMNELKAELESGRQMMQELDEKRSNLGYAMTRISGAIQVLEEL 55
          M EQ++AR+ ELKAELESG++ ++ L+ +R+N+ Y + RI+GAIQVLEEL
Sbjct: 1  MSEQIDARIKELKAELESGQKAIENLEVQRTNIMYTLLRINGAIQVLEEL 50


>B8I244.1 B8I244_CLOCE Putative uncharacterized protein
          Length = 59

 Score = 58.9 bits (141), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/50 (58%), Positives = 39/50 (78%)

Query: 6  MKEQLEARMNELKAELESGRQMMQELDEKRSNLGYAMTRISGAIQVLEEL 55
          MKE++E R+ ELK E E+G++M++ELD KR+ L   + RISGAIQ LEEL
Sbjct: 1  MKEKIEERIKELKGEFENGQKMLEELDAKRAGLNQTLLRISGAIQALEEL 50


>A9B7Q3.1 A9B7Q3_HERA2 Putative uncharacterized protein
          Length = 63

 Score = 54.3 bits (129), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query: 6  MKEQLEARMNELKAELESGRQMMQELDEKRSNLGYAMTRISGAIQVLEE 54
          M++QLE R+  LK E ++G+ M+ EL+ KR NL   + RISGAIQVLEE
Sbjct: 1  MRQQLEQRLATLKEEFQAGQTMLAELETKRENLNATLLRISGAIQVLEE 49


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.304    0.122    0.297 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 298,319,268
Number of extensions: 8567951
Number of successful extensions: 55022
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 55025
Number of HSP's successfully gapped: 5
Length of query: 65
Length of database: 3,060,696,203
Length adjustment: 37
Effective length of query: 28
Effective length of database: 2,712,118,648
Effective search space: 75939322144
Effective search space used: 75939322144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 125 (52.8 bits)