BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0568.0009.p (418 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K780.1 B3K780_9BACI Major facilitator superfamily MFS_1 570 e-160 C2W6N4.1 C2W6N4_BACCE Fosmidomycin resistance protein 403 e-110 C3BIW5.1 C3BIW5_9BACI Uncharacterized MFS-type transporter 398 e-109 C3AVM4.1 C3AVM4_BACMY Uncharacterized MFS-type transporter 398 e-109 C3B259.1 C3B259_BACMY Uncharacterized MFS-type transporter 397 e-108 >B3K780.1 B3K780_9BACI Major facilitator superfamily MFS_1 Length = 418 Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust. Identities = 274/418 (65%), Positives = 335/418 (80%) Query: 1 MNNKTISSTAPIIKEEQDQRHLQQATIYRILLAVSFVHLFNDSIQALIPAMFPILKDNML 60 M +K+I+ P QAT+Y+IL+A+SFVHLFNDSIQ++IPA+FPILKDN+L Sbjct: 1 MADKSIALQKPKDTPSPAHGEANQATVYKILIAISFVHLFNDSIQSVIPAIFPILKDNLL 60 Query: 61 LSYAQVGWIAFALNITSSVIQPVIGYAADRTPRPILLPLGMCCTFAGVFLLAFAGNYALV 120 L++ Q+GWI+FA+N TSS+IQPVIGYAADR P PILLP+GMC TFAGVF+LA+A Y LV Sbjct: 61 LTFTQIGWISFAINFTSSIIQPVIGYAADRRPTPILLPIGMCFTFAGVFILAYAHTYILV 120 Query: 121 IFSVMLVGFGSAAFHPEGMRVAHMAAGQRKGLSQSIFQVGGNAGQSLGPLLMKWVFIPFG 180 +F+V+L+G GSA FHPEGMRVAHMAAG RKGLSQSIFQVGGNAGQSL PLL +++F+PFG Sbjct: 121 LFAVVLIGLGSATFHPEGMRVAHMAAGMRKGLSQSIFQVGGNAGQSLAPLLTRYIFVPFG 180 Query: 181 QMGALGFTVIAAAGIAVQTYVAKWYRKMLNEGYTFRKKSAARTIDPARSKSILTATIILV 240 Q GA+GFT +AAAGI VQ+YVA WY ML GYTF+KK+A R +DPAR KS+ AT++LV Sbjct: 181 QFGAIGFTFVAAAGIIVQSYVAHWYHGMLKAGYTFKKKAAGRMLDPARRKSVRNATLVLV 240 Query: 241 FLVFVRSWYGASIGGYYAFYLMKNYGMTIDDAQIYIFMYLAAGAVGTFFGGPLADRFGRR 300 LVF+RSWYGA+I YYAFYLM Y +TID+AQIYIF++LA+GAVGTFFGGPLADRFGRR Sbjct: 241 ILVFIRSWYGAAISSYYAFYLMDAYKITIDNAQIYIFLFLASGAVGTFFGGPLADRFGRR 300 Query: 301 NLILLSMVGTVPFALALPFVNQTFALVLLVISGFILLSSFSVTVIYAQMLYPGNIGTVSG 360 N+I+LSM+GT P AL LPF + +A VLL+I GF+LLSSFSVTV+YAQML+PGNIGTVSG Sbjct: 301 NMIMLSMIGTAPIALILPFASPFWAAVLLLIGGFVLLSSFSVTVVYAQMLHPGNIGTVSG 360 Query: 361 LITGLAFGLGGIGSVVIGELIDRIGITTVFVACGFXXXXXXXXXXXXXXXXXEEWAAE 418 LITG AFG+GG+GS+V+G L D GI V +A GF ++W+ E Sbjct: 361 LITGFAFGMGGVGSLVLGNLGDAWGIGNVMIAIGFLPLLGLLALLLPGDDKLDQWSRE 418 >C2W6N4.1 C2W6N4_BACCE Fosmidomycin resistance protein Length = 401 Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust. Identities = 207/382 (54%), Positives = 277/382 (72%), Gaps = 1/382 (0%) Query: 13 IKEEQDQRHLQQATIYRILLAVSFVHLFNDSIQALIPAMFPILKDNMLLSYAQVGWIAFA 72 ++ + + TIYRIL A+SF H NDS+QA++PA+FPIL+ +M LSY QVGWIAFA Sbjct: 1 MQAVSKENTVASPTIYRILFAISFGHFLNDSMQAVVPALFPILEKSMNLSYMQVGWIAFA 60 Query: 73 LNITSSVIQPVIGYAADRTPRPILLPLGMCCTFAGVFLLAFAGNYALVIFSVMLVGFGSA 132 LN+TSS++QPV G +D+ P P LLPLGM + G+ LAFA N+ +VI SV+ +G GSA Sbjct: 61 LNMTSSIMQPVFGMYSDKKPSPFLLPLGMLSSMLGMIGLAFAPNFIIVIISVLFIGLGSA 120 Query: 133 AFHPEGMRVAHMAAGQRKGLSQSIFQVGGNAGQSLGPLLMKWVFIPFGQMGALGFTVIAA 192 FHPEG RVA+MAAG ++GL+QSI+QVGGN G SL P+ +F+P GQ+GALGFTV AA Sbjct: 121 VFHPEGARVAYMAAGAKRGLAQSIYQVGGNTGNSLAPIFTALIFVPLGQIGALGFTVFAA 180 Query: 193 AGIAVQTYVAKWYRKMLNEGYTFRKKSAARTIDPA-RSKSILTATIILVFLVFVRSWYGA 251 GIA+ +V+ WY+ L G RKK AA + A S I ++LVFL FVRSWYGA Sbjct: 181 VGIALLIFVSNWYKNELVNGAVRRKKRAALEAENAIVSTHIKFVIVLLVFLTFVRSWYGA 240 Query: 252 SIGGYYAFYLMKNYGMTIDDAQIYIFMYLAAGAVGTFFGGPLADRFGRRNLILLSMVGTV 311 IG +Y FYL+++YG++I +AQ ++F ++ AG +GTFFGGPLADRFG++N+I+ SM+G+ Sbjct: 241 GIGNFYQFYLIEHYGLSIQNAQYFVFAFMIAGVLGTFFGGPLADRFGKKNIIVFSMLGSA 300 Query: 312 PFALALPFVNQTFALVLLVISGFILLSSFSVTVIYAQMLYPGNIGTVSGLITGLAFGLGG 371 P AL LP+V+ ++ + L + GFI SSFSV V+YAQ L PG +G VSGLI GLAFGLG Sbjct: 301 PLALLLPYVSLSWVVPLFLCIGFISSSSFSVIVVYAQELVPGKVGMVSGLIVGLAFGLGA 360 Query: 372 IGSVVIGELIDRIGITTVFVAC 393 +G+VV+G+L D + + V C Sbjct: 361 LGAVVLGKLADVYSLQFIMVLC 382 >C3BIW5.1 C3BIW5_9BACI Uncharacterized MFS-type transporter Length = 402 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/382 (53%), Positives = 274/382 (71%), Gaps = 1/382 (0%) Query: 13 IKEEQDQRHLQQATIYRILLAVSFVHLFNDSIQALIPAMFPILKDNMLLSYAQVGWIAFA 72 ++ + + TIYRIL A+SF H NDS+QA++PA+FPIL+ +M LSY QVGWIAFA Sbjct: 1 MQAVSKENKIASPTIYRILFAISFGHFLNDSMQAVVPALFPILEKSMNLSYMQVGWIAFA 60 Query: 73 LNITSSVIQPVIGYAADRTPRPILLPLGMCCTFAGVFLLAFAGNYALVIFSVMLVGFGSA 132 LN+TSS++QPV G +D+ P P LLPLGM + G+ LAFA N+ +VI SV+ +G GSA Sbjct: 61 LNMTSSIMQPVFGMYSDKKPSPFLLPLGMFSSMLGMIGLAFAPNFIIVIISVLFIGLGSA 120 Query: 133 AFHPEGMRVAHMAAGQRKGLSQSIFQVGGNAGQSLGPLLMKWVFIPFGQMGALGFTVIAA 192 FHPEG RVA+MAAG ++GL+QSI+QVGGN G SL P+ +F+P GQ+G+LGFT AA Sbjct: 121 VFHPEGARVAYMAAGAKRGLAQSIYQVGGNTGNSLAPIFTALIFVPLGQVGSLGFTAFAA 180 Query: 193 AGIAVQTYVAKWYRKMLNEGYTFRKKSAARTIDPA-RSKSILTATIILVFLVFVRSWYGA 251 GI + +V+ WY+ L G RKK AA + A SK I ++LVFL FVRSWYGA Sbjct: 181 VGIVLLIFVSNWYKNELVNGAMRRKKRAALEAENAIVSKHIKFVIVLLVFLTFVRSWYGA 240 Query: 252 SIGGYYAFYLMKNYGMTIDDAQIYIFMYLAAGAVGTFFGGPLADRFGRRNLILLSMVGTV 311 IG +Y FYL+++YG++I +AQ ++F ++ AG +GTFFGGPLADRFG++N+I+ SM+G+ Sbjct: 241 GIGNFYQFYLIEHYGVSIKNAQYFVFAFMIAGVLGTFFGGPLADRFGKKNIIVFSMLGSA 300 Query: 312 PFALALPFVNQTFALVLLVISGFILLSSFSVTVIYAQMLYPGNIGTVSGLITGLAFGLGG 371 P AL LP V+ + + L + GFI SSFSV V+YAQ L PG +G VSGLI GLAFGLG Sbjct: 301 PLALLLPHVSLAWVVPLFLCIGFISSSSFSVIVVYAQELVPGKVGMVSGLIVGLAFGLGA 360 Query: 372 IGSVVIGELIDRIGITTVFVAC 393 +G+VV+G+L D + + V C Sbjct: 361 LGAVVLGKLADVYSLQFIMVLC 382 >C3AVM4.1 C3AVM4_BACMY Uncharacterized MFS-type transporter Length = 402 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/382 (53%), Positives = 274/382 (71%), Gaps = 1/382 (0%) Query: 13 IKEEQDQRHLQQATIYRILLAVSFVHLFNDSIQALIPAMFPILKDNMLLSYAQVGWIAFA 72 ++ + + TIYRIL A+SF H NDS+QA++PA+FPIL+ +M LSY QVGWIAFA Sbjct: 1 MQAVSKENKIASPTIYRILFAISFGHFLNDSMQAVVPALFPILEKSMNLSYMQVGWIAFA 60 Query: 73 LNITSSVIQPVIGYAADRTPRPILLPLGMCCTFAGVFLLAFAGNYALVIFSVMLVGFGSA 132 LN+TSS++QPV G +D+ P P LLPLGM + G+ LAFA N+ +VI SV+ +G GSA Sbjct: 61 LNMTSSIMQPVFGMYSDKKPSPFLLPLGMFSSMLGMIGLAFAPNFIIVIISVLFIGLGSA 120 Query: 133 AFHPEGMRVAHMAAGQRKGLSQSIFQVGGNAGQSLGPLLMKWVFIPFGQMGALGFTVIAA 192 FHPEG RVA+MAAG ++GL+QSI+QVGGN G SL P+ +F+P GQ+G+LGFT AA Sbjct: 121 VFHPEGARVAYMAAGAKRGLAQSIYQVGGNTGNSLAPIFTALIFVPLGQVGSLGFTAFAA 180 Query: 193 AGIAVQTYVAKWYRKMLNEGYTFRKKSAARTIDPA-RSKSILTATIILVFLVFVRSWYGA 251 GI + +V+ WY+ L G RKK AA + A SK I ++LVFL FVRSWYGA Sbjct: 181 IGIVLLIFVSNWYKNELVNGAVRRKKRAALEAENAIVSKHIKFVIVLLVFLTFVRSWYGA 240 Query: 252 SIGGYYAFYLMKNYGMTIDDAQIYIFMYLAAGAVGTFFGGPLADRFGRRNLILLSMVGTV 311 IG +Y FYL+++YG++I +AQ ++F ++ AG +GTFFGGPLADRFG++N+I+ SM+G+ Sbjct: 241 GIGNFYQFYLIEHYGVSIKNAQYFVFAFMIAGVLGTFFGGPLADRFGKKNIIVFSMLGSA 300 Query: 312 PFALALPFVNQTFALVLLVISGFILLSSFSVTVIYAQMLYPGNIGTVSGLITGLAFGLGG 371 P AL LP V+ + + L + GFI SSFSV V+YAQ L PG +G VSGLI GLAFGLG Sbjct: 301 PLALLLPHVSLAWVVPLFLCIGFISSSSFSVIVVYAQELVPGKVGMVSGLIVGLAFGLGA 360 Query: 372 IGSVVIGELIDRIGITTVFVAC 393 +G+VV+G+L D + + V C Sbjct: 361 LGAVVLGKLADVYSLQFIMVLC 382 >C3B259.1 C3B259_BACMY Uncharacterized MFS-type transporter Length = 402 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 204/382 (53%), Positives = 274/382 (71%), Gaps = 1/382 (0%) Query: 13 IKEEQDQRHLQQATIYRILLAVSFVHLFNDSIQALIPAMFPILKDNMLLSYAQVGWIAFA 72 ++ + + TIYRIL A+SF H NDS+QA++PA+FPIL+ +M LSY QVGWIAFA Sbjct: 1 MQAVSKENKIASPTIYRILFAISFGHFLNDSMQAVVPALFPILEKSMNLSYMQVGWIAFA 60 Query: 73 LNITSSVIQPVIGYAADRTPRPILLPLGMCCTFAGVFLLAFAGNYALVIFSVMLVGFGSA 132 LN+TSS++QPV G +D+ P P LLPLGM + G+ LAFA N+ +VI SV+ +G GSA Sbjct: 61 LNMTSSIMQPVFGMYSDKKPSPFLLPLGMFSSMLGMIGLAFAPNFIIVIISVLFIGLGSA 120 Query: 133 AFHPEGMRVAHMAAGQRKGLSQSIFQVGGNAGQSLGPLLMKWVFIPFGQMGALGFTVIAA 192 FHPEG RVA+MAAG ++GL+QSI+QVGGN G SL P+ +F+P G++G+LGFT AA Sbjct: 121 VFHPEGARVAYMAAGAKRGLAQSIYQVGGNTGNSLAPIFTALIFVPLGKVGSLGFTAFAA 180 Query: 193 AGIAVQTYVAKWYRKMLNEGYTFRKKSAARTIDPA-RSKSILTATIILVFLVFVRSWYGA 251 GI + +V+ WY+ L G RKK AA + A SK I ++LVFL FVRSWYGA Sbjct: 181 VGIVLLIFVSNWYKNELVNGAVRRKKRAALEAENAIVSKHIKFVIVLLVFLTFVRSWYGA 240 Query: 252 SIGGYYAFYLMKNYGMTIDDAQIYIFMYLAAGAVGTFFGGPLADRFGRRNLILLSMVGTV 311 IG +Y FYL+++YG++I +AQ ++F ++ AG +GTFFGGPLADRFG++N+I+ SM+G+ Sbjct: 241 GIGNFYQFYLIEHYGVSIKNAQYFVFAFMIAGVLGTFFGGPLADRFGKKNIIVFSMLGSA 300 Query: 312 PFALALPFVNQTFALVLLVISGFILLSSFSVTVIYAQMLYPGNIGTVSGLITGLAFGLGG 371 P AL LP V+ + + L + GFI SSFSV V+YAQ L PG +G VSGLI GLAFGLG Sbjct: 301 PLALLLPHVSLAWVVPLFLCIGFISSSSFSVIVVYAQELVPGKVGMVSGLIVGLAFGLGA 360 Query: 372 IGSVVIGELIDRIGITTVFVAC 393 +G+VV+G+L D + + V C Sbjct: 361 LGAVVLGKLADVYSLQFIMVLC 382 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.142 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,250,438,306 Number of extensions: 92419250 Number of successful extensions: 453823 Number of sequences better than 1.0e-05: 1352 Number of HSP's gapped: 454199 Number of HSP's successfully gapped: 1358 Length of query: 418 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 280 Effective length of database: 1,760,596,133 Effective search space: 492966917240 Effective search space used: 492966917240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 132 (55.5 bits)