BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0056.p (631 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KB97.1 B3KB97_9BACI PrkA AAA domain protein 1123 0.0 B1DDG8.1 B1DDG8_9BACL Putative serine protein kinase, PrkA 1113 0.0 B7DQG8.1 B7DQG8_9BACL Putative serine protein kinase, PrkA 1016 0.0 C1PV58.1 C1PV58_ALIAC Putative Ser protein kinase 1014 0.0 C0Z6A2.1 C0Z6A2_BREBN Serine protein kinase 1013 0.0 >B3KB97.1 B3KB97_9BACI PrkA AAA domain protein Length = 631 Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust. Identities = 537/631 (85%), Positives = 580/631 (91%) Query: 1 MDIFERIASYRAENDRLAWSGTFKEYIELLKKDPSPAKTAHSRVYDMIKSHGVEDINGRK 60 MDIFERIASYRAE DRLAWSGTF+EYIE+LKKDPSPA TAH+RVYDMI+S+G E+ G+K Sbjct: 1 MDIFERIASYRAEGDRLAWSGTFREYIEILKKDPSPAMTAHARVYDMIESYGFEESGGQK 60 Query: 61 RYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGLE 120 +YKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVT+LKRGLE Sbjct: 61 KYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTMLKRGLE 120 Query: 121 QYSRTDEGAVYAIEGCPMHEDPLHXXXXXXXXXXXXXXGVRIEGNLCPSCQMRLKNEYHG 180 ++SRTD GAVYAI GCPM E+PLH GVRIEGNLCP+CQ+RLK EY G Sbjct: 121 KHSRTDRGAVYAIAGCPMQEEPLHLIPTELRPEIEKELGVRIEGNLCPACQLRLKTEYGG 180 Query: 181 DIEQXXXXXXXXXXXXXXGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRFD 240 DIE+ GIGTFSPSDPKSQDIADLTGSIDFSTITE+GSESDPRAYRFD Sbjct: 181 DIEKVEVERILISEENRVGIGTFSPSDPKSQDIADLTGSIDFSTITEYGSESDPRAYRFD 240 Query: 241 GELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEYK 300 GELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADE+I+AHTNE+EYK Sbjct: 241 GELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADELIVAHTNESEYK 300 Query: 301 SFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMKHVHIAPHALRAAAIFSI 360 +FI+NKKNEALQSRMIVMP+PYNLRVS+EEKIY+KLI QSDMKH+HIAPHALR+AAIFS+ Sbjct: 301 AFIANKKNEALQSRMIVMPIPYNLRVSDEEKIYSKLIGQSDMKHIHIAPHALRSAAIFSV 360 Query: 361 LTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRISS 420 LTRLKE+KKQGMDLIKK+RMYDG EVEGYKEADLKEMQ EYL+EGMSGIDPRYVINRISS Sbjct: 361 LTRLKETKKQGMDLIKKMRMYDGVEVEGYKEADLKEMQNEYLEEGMSGIDPRYVINRISS 420 Query: 421 ALIKNDLKCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKAF 480 ALIK DL+C+NALD+LRAIKDGLDQH SI KEERERYLNFI+ ARKEYD LAK EVQKAF Sbjct: 421 ALIKQDLQCINALDMLRAIKDGLDQHASIAKEERERYLNFIAAARKEYDDLAKKEVQKAF 480 Query: 481 VYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMEPDERLMRSIEEQIGISENAKKA 540 VYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEM+PDERLMRSIEEQIG+SENAKKA Sbjct: 481 VYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMDPDERLMRSIEEQIGVSENAKKA 540 Query: 541 FREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFADLKDIVKITTSSKTPDESQLKRI 600 FREEI+IRISAYSRKGKKFEY+NH+RLREAIEKKLF DLKDIVKITTS+KTPD QLKRI Sbjct: 541 FREEIMIRISAYSRKGKKFEYHNHERLREAIEKKLFTDLKDIVKITTSTKTPDAVQLKRI 600 Query: 601 NEVSRRLIDEHGYCPICANELLKYVGSLLNR 631 NEVS RLI+EHGYCP+CANELL+YVGSLLNR Sbjct: 601 NEVSSRLIEEHGYCPVCANELLRYVGSLLNR 631 >B1DDG8.1 B1DDG8_9BACL Putative serine protein kinase, PrkA Length = 631 Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/631 (83%), Positives = 583/631 (92%) Query: 1 MDIFERIASYRAENDRLAWSGTFKEYIELLKKDPSPAKTAHSRVYDMIKSHGVEDINGRK 60 MDIF+RI+ Y+ E+++LAW+G+FKEYIELL++DP+PA TAH+RVY+MI S GVED NGRK Sbjct: 1 MDIFKRISEYQTESEKLAWTGSFKEYIELLREDPTPAMTAHARVYEMIDSFGVEDDNGRK 60 Query: 61 RYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGLE 120 RYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKST+VT+LK+GLE Sbjct: 61 RYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTIVTMLKKGLE 120 Query: 121 QYSRTDEGAVYAIEGCPMHEDPLHXXXXXXXXXXXXXXGVRIEGNLCPSCQMRLKNEYHG 180 ++SRT++GA YAI+GCPMHE+PLH GVRIEGNLCPSCQMRL+ EY G Sbjct: 121 RFSRTEKGATYAIKGCPMHEEPLHLIPHELRPEIEKELGVRIEGNLCPSCQMRLRVEYDG 180 Query: 181 DIEQXXXXXXXXXXXXXXGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRFD 240 DIE GIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRFD Sbjct: 181 DIENVIVERVLVSEENRVGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRFD 240 Query: 241 GELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEYK 300 GELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADE+IIAHTNE+EYK Sbjct: 241 GELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADELIIAHTNESEYK 300 Query: 301 SFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMKHVHIAPHALRAAAIFSI 360 SFISNKKNEALQSRMIVMP+PYNL+VSEEEKIY KLI QSDMKH+HIAPH+L++AAIFSI Sbjct: 301 SFISNKKNEALQSRMIVMPIPYNLKVSEEEKIYTKLIGQSDMKHIHIAPHSLKSAAIFSI 360 Query: 361 LTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRISS 420 LTRLKE+KKQGMDL+KK+RMYDGEEVEG+KEADLKEMQ EY++EGMSGIDPRYVINRISS Sbjct: 361 LTRLKETKKQGMDLVKKMRMYDGEEVEGFKEADLKEMQNEYIEEGMSGIDPRYVINRISS 420 Query: 421 ALIKNDLKCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKAF 480 ALIK D+ C+NALDVLRA+KDGLDQHPSITKEERERYLNFIS+ARKEYD LAK E+QKAF Sbjct: 421 ALIKQDMHCINALDVLRALKDGLDQHPSITKEERERYLNFISVARKEYDNLAKKEIQKAF 480 Query: 481 VYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMEPDERLMRSIEEQIGISENAKKA 540 VYSFEESA+TLFENYLDNIE++CNWTKI+DPLT EEM+PDERLMRSIEEQIG+SENAKKA Sbjct: 481 VYSFEESARTLFENYLDNIESYCNWTKIKDPLTGEEMDPDERLMRSIEEQIGVSENAKKA 540 Query: 541 FREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFADLKDIVKITTSSKTPDESQLKRI 600 FREEILIRIS+YSRKGKKF++ +H+RLREA+EKKLF DLKDIVKITTS+KTPDESQLKRI Sbjct: 541 FREEILIRISSYSRKGKKFDFTSHERLREAVEKKLFTDLKDIVKITTSTKTPDESQLKRI 600 Query: 601 NEVSRRLIDEHGYCPICANELLKYVGSLLNR 631 NEV++RLIDEHGYCP+CANELL+YVGSLLNR Sbjct: 601 NEVTKRLIDEHGYCPVCANELLRYVGSLLNR 631 >B7DQG8.1 B7DQG8_9BACL Putative serine protein kinase, PrkA Length = 632 Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust. Identities = 478/632 (75%), Positives = 557/632 (88%), Gaps = 1/632 (0%) Query: 1 MDIFERIASYRAENDRLAWSGTFKEYIELLKKDPSPAKTAHSRVYDMIKSHGVE-DINGR 59 M ER++SYRAE + L W GTF +Y+EL++++P+ A+TAH+R+YDMI + GVE D +G+ Sbjct: 1 MSFLERLSSYRAEEEALRWRGTFADYLELVRQNPNIARTAHARIYDMIVAAGVETDADGK 60 Query: 60 KRYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGL 119 YKFFE+EIFGL +E+LVEEYFH+AARRLDVRKRILLLMGPVSGGKST+VTLLKRGL Sbjct: 61 PHYKFFEKEIFGLSDTIERLVEEYFHAAARRLDVRKRILLLMGPVSGGKSTIVTLLKRGL 120 Query: 120 EQYSRTDEGAVYAIEGCPMHEDPLHXXXXXXXXXXXXXXGVRIEGNLCPSCQMRLKNEYH 179 EQYSRT EGA+YAI GCPMHE+PLH GV+IEGNLCPSC++R+ E+ Sbjct: 121 EQYSRTPEGALYAIAGCPMHEEPLHLIPNELRPDFEAEFGVKIEGNLCPSCRLRVDEEFG 180 Query: 180 GDIEQXXXXXXXXXXXXXXGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRF 239 G IE GIGTFSPSDPKSQDIADLTGS+DFSTITE+GSESDPRAYRF Sbjct: 181 GRIEDVPVERIVLSEERRVGIGTFSPSDPKSQDIADLTGSVDFSTITEYGSESDPRAYRF 240 Query: 240 DGELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEY 299 DGELNKANRGLMEFQEMLKCDEKFLW+LLSLTQEGNFKAGRFALISADEMIIAHTNE EY Sbjct: 241 DGELNKANRGLMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADEMIIAHTNEAEY 300 Query: 300 KSFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMKHVHIAPHALRAAAIFS 359 +SFI+NKKNEALQSRMIVMP+PYNLRV +E KIY KL+ QSD+K+VHIAPHALR AAIFS Sbjct: 301 RSFIANKKNEALQSRMIVMPIPYNLRVDDEVKIYEKLVQQSDLKNVHIAPHALRTAAIFS 360 Query: 360 ILTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRIS 419 ILTRLKESKKQG+DL+KKL +Y+G+ VEG K++D+KE++ E+ DEGMSG+DPRY+INRIS Sbjct: 361 ILTRLKESKKQGVDLMKKLYLYNGQAVEGLKDSDVKELKAEFPDEGMSGLDPRYIINRIS 420 Query: 420 SALIKNDLKCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKA 479 +ALI+ D +C+NALDVLRAIKDGLDQHPSIT E+RER LNF+++AR+EYD +AK+EVQKA Sbjct: 421 TALIRRDTQCINALDVLRAIKDGLDQHPSITPEDRERLLNFVAMARREYDEMAKTEVQKA 480 Query: 480 FVYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMEPDERLMRSIEEQIGISENAKK 539 FVYSFEESAKTL ENYLDN+EA+CNW KI+DPLT EEM+PDE+LMRSIEEQIGISENAK+ Sbjct: 481 FVYSFEESAKTLLENYLDNVEAYCNWQKIKDPLTGEEMDPDEKLMRSIEEQIGISENAKR 540 Query: 540 AFREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFADLKDIVKITTSSKTPDESQLKR 599 AFREEILIRIS Y+R+GKKF+Y++HDRL+EAIEKKLFADLKD+VKITTSSKTPDE QLK+ Sbjct: 541 AFREEILIRISTYARRGKKFDYHSHDRLKEAIEKKLFADLKDVVKITTSSKTPDEQQLKK 600 Query: 600 INEVSRRLIDEHGYCPICANELLKYVGSLLNR 631 INEV+RRLIDEHGYCP+CANELL+Y GSLLNR Sbjct: 601 INEVTRRLIDEHGYCPVCANELLRYTGSLLNR 632 >C1PV58.1 C1PV58_ALIAC Putative Ser protein kinase Length = 632 Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 477/632 (75%), Positives = 557/632 (88%), Gaps = 1/632 (0%) Query: 1 MDIFERIASYRAENDRLAWSGTFKEYIELLKKDPSPAKTAHSRVYDMIKSHGVE-DINGR 59 M ER++SYRAE + L W GTF +Y+EL++++P+ A+TAH+R+YDMI + GVE D +G+ Sbjct: 1 MSFLERLSSYRAEEEALRWRGTFADYLELVRQNPNIARTAHARIYDMIVAAGVETDADGK 60 Query: 60 KRYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGL 119 YKFFE+EIFGL +E+LVEEYFH+AARRLDVRKRILLLMGPVSGGKST+VTLLKRGL Sbjct: 61 PHYKFFEKEIFGLSDTIERLVEEYFHAAARRLDVRKRILLLMGPVSGGKSTIVTLLKRGL 120 Query: 120 EQYSRTDEGAVYAIEGCPMHEDPLHXXXXXXXXXXXXXXGVRIEGNLCPSCQMRLKNEYH 179 EQYSRT EGA+YAI GCPMHE+PLH GV+IEGNLCPSC++R+ E+ Sbjct: 121 EQYSRTPEGALYAIAGCPMHEEPLHLIPNELRPDFEAEFGVKIEGNLCPSCRLRVDEEFG 180 Query: 180 GDIEQXXXXXXXXXXXXXXGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRF 239 G IE GIGTFSPSDPKSQDIADLTGS+DFSTITE+GSESDPRAYRF Sbjct: 181 GRIEDVPVERIVLSEERRVGIGTFSPSDPKSQDIADLTGSVDFSTITEYGSESDPRAYRF 240 Query: 240 DGELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEY 299 DGELNKANRGLMEFQEMLKCDEKFLW+LLSLTQEGNFKAGRFALISADEMIIAHTNE EY Sbjct: 241 DGELNKANRGLMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADEMIIAHTNEAEY 300 Query: 300 KSFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMKHVHIAPHALRAAAIFS 359 +SFI+NKKNEALQSRMIVMP+PYNLRV +E KIY KL+ QSD+K+VHIAPHALR AAIFS Sbjct: 301 RSFIANKKNEALQSRMIVMPIPYNLRVDDEVKIYEKLVQQSDLKNVHIAPHALRTAAIFS 360 Query: 360 ILTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRIS 419 ILTRLKESKKQG+DL+KKL +Y+G+ VEG K++D+KE++ E+ DEGMSG+DPRY+INRIS Sbjct: 361 ILTRLKESKKQGVDLMKKLYLYNGQAVEGLKDSDVKELKAEFPDEGMSGLDPRYIINRIS 420 Query: 420 SALIKNDLKCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKA 479 +ALI+ D +C+NALDVLRAIKDGLDQHPSIT E+RER LNF+++AR+EYD +AK+EVQKA Sbjct: 421 TALIRRDTQCINALDVLRAIKDGLDQHPSITPEDRERLLNFVAMARREYDEMAKTEVQKA 480 Query: 480 FVYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMEPDERLMRSIEEQIGISENAKK 539 FVYSFEESAKTL ENYLDN+EA+CNW KI+DPLT EEM+PDE+LMRSIEEQIGISENAK+ Sbjct: 481 FVYSFEESAKTLLENYLDNVEAYCNWQKIKDPLTGEEMDPDEKLMRSIEEQIGISENAKR 540 Query: 540 AFREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFADLKDIVKITTSSKTPDESQLKR 599 AFREEILIRIS Y+R+GKKF+Y++H+RL+EAIEKKLFADLKD+VKITTSSKTPDE QLK+ Sbjct: 541 AFREEILIRISTYARRGKKFDYHSHERLKEAIEKKLFADLKDVVKITTSSKTPDEQQLKK 600 Query: 600 INEVSRRLIDEHGYCPICANELLKYVGSLLNR 631 INEV+RRLIDEHGYCP+CANELL+Y GSLLNR Sbjct: 601 INEVTRRLIDEHGYCPVCANELLRYTGSLLNR 632 >C0Z6A2.1 C0Z6A2_BREBN Serine protein kinase Length = 632 Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/632 (76%), Positives = 560/632 (88%), Gaps = 1/632 (0%) Query: 1 MDIFERIASYRAENDRLAWSGTFKEYIELLKKDPSPAKTAHSRVYDMIKSHGVEDI-NGR 59 MDI +RIA +RA + L W GTF EY++L++K+P A+TAHSRVY+MIKS GVE+ +G Sbjct: 1 MDILKRIAEHRAREENLMWRGTFAEYLQLVRKNPQIAQTAHSRVYNMIKSAGVEENEDGS 60 Query: 60 KRYKFFEQEIFGLDRAVEKLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTLLKRGL 119 + Y+FF +EIFGLDR+VE+LVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVT+LKRGL Sbjct: 61 RSYQFFSREIFGLDRSVERLVEEYFHSAARRLDVRKRILLLMGPVSGGKSTLVTMLKRGL 120 Query: 120 EQYSRTDEGAVYAIEGCPMHEDPLHXXXXXXXXXXXXXXGVRIEGNLCPSCQMRLKNEYH 179 E+YSRT++GA++A++GCPMHE+PLH G++IEG L P +MRL+ EY Sbjct: 121 EEYSRTEDGAIFALDGCPMHEEPLHLIPHDLRLEVEEELGIKIEGELTPYNRMRLETEYG 180 Query: 180 GDIEQXXXXXXXXXXXXXXGIGTFSPSDPKSQDIADLTGSIDFSTITEFGSESDPRAYRF 239 G IE GIGTFSPSDPKSQDIADLTGSIDFSTIT++GSESDPRAYRF Sbjct: 181 GCIEDFPVRRILFSEANRVGIGTFSPSDPKSQDIADLTGSIDFSTITKYGSESDPRAYRF 240 Query: 240 DGELNKANRGLMEFQEMLKCDEKFLWNLLSLTQEGNFKAGRFALISADEMIIAHTNETEY 299 DGELNKANRGLMEFQEMLKCDEKFLW+LLSLTQEGNFKAGRFALISADE+I+AHTNE+EY Sbjct: 241 DGELNKANRGLMEFQEMLKCDEKFLWHLLSLTQEGNFKAGRFALISADELIVAHTNESEY 300 Query: 300 KSFISNKKNEALQSRMIVMPVPYNLRVSEEEKIYAKLIAQSDMKHVHIAPHALRAAAIFS 359 K+FI NKKNEALQSR+IVMP+PYNLRVS+EEKIYAKLI QSD+ HVHIAPHALR+AA+FS Sbjct: 301 KAFIGNKKNEALQSRIIVMPMPYNLRVSDEEKIYAKLIKQSDLGHVHIAPHALRSAAVFS 360 Query: 360 ILTRLKESKKQGMDLIKKLRMYDGEEVEGYKEADLKEMQTEYLDEGMSGIDPRYVINRIS 419 I+TRLKESKKQG DL+KK+R+YDGE VEG+K ADL+E++ E+ DEGMSGIDPRYVINRIS Sbjct: 361 IMTRLKESKKQGADLLKKMRLYDGESVEGFKGADLEELRNEHADEGMSGIDPRYVINRIS 420 Query: 420 SALIKNDLKCMNALDVLRAIKDGLDQHPSITKEERERYLNFISIARKEYDILAKSEVQKA 479 SALI+ D +C+NALD+LRA+K+G DQHPSITKE+RERY+NFISIARKEYD LAK EVQKA Sbjct: 421 SALIRRDTECINALDILRALKEGFDQHPSITKEQRERYMNFISIARKEYDELAKKEVQKA 480 Query: 480 FVYSFEESAKTLFENYLDNIEAFCNWTKIRDPLTDEEMEPDERLMRSIEEQIGISENAKK 539 FVYS+EESAKTL +NYLDN+EA+CN KIRDP+T EEM+PDERLMRSIEEQIGISENAK+ Sbjct: 481 FVYSYEESAKTLMDNYLDNVEAYCNMNKIRDPVTGEEMDPDERLMRSIEEQIGISENAKR 540 Query: 540 AFREEILIRISAYSRKGKKFEYNNHDRLREAIEKKLFADLKDIVKITTSSKTPDESQLKR 599 AFREEILIRISAY+RKGK+F+Y+ HDRLREAIEKKLFADLKD+VKITTS+KTPDE QLK+ Sbjct: 541 AFREEILIRISAYARKGKRFDYSTHDRLREAIEKKLFADLKDVVKITTSNKTPDEHQLKK 600 Query: 600 INEVSRRLIDEHGYCPICANELLKYVGSLLNR 631 INEV++RLI+EH YCP+CANELL+YVGSLLNR Sbjct: 601 INEVTKRLIEEHQYCPVCANELLRYVGSLLNR 632 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,364,076,692 Number of extensions: 133412692 Number of successful extensions: 469869 Number of sequences better than 1.0e-05: 535 Number of HSP's gapped: 466787 Number of HSP's successfully gapped: 551 Length of query: 631 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 489 Effective length of database: 1,722,912,073 Effective search space: 842504003697 Effective search space used: 842504003697 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)