BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0052.p (774 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A5KPR4.1 A5KPR4_9FIRM Putative uncharacterized protein 211 3e-52 A9KJ77.1 A9KJ77_CLOPH Transglutaminase domain protein 187 3e-45 B1Q5I4.1 B1Q5I4_CLOBO Conserved domain protein 94 5e-17 A5HYS7.1 A5HYS7_CLOBH Putative exported protein 92 2e-16 B1IDE2.1 B1IDE2_CLOBK Conserved domain protein 92 3e-16 >A5KPR4.1 A5KPR4_9FIRM Putative uncharacterized protein Length = 777 Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 129/314 (41%), Positives = 184/314 (58%), Gaps = 11/314 (3%) Query: 450 IHADSALEEYLALNLISGKTEISLQAFPEAQNARTLVDEVEKVIYQNPLILGFRGYSYDY 509 + A+SAL EYLA+N+++ T ISL+ FPE+ + L+D E+ +YQNP++LG G S Sbjct: 453 VTANSALSEYLAVNMLNANTSISLKEFPESADTDYLLDAWEEAVYQNPMVLGVTGASIAN 512 Query: 510 KTLTLHTEFDDPAEVILSKQLKILAEADKVIAAAIKDGMSADEKQMAIYNYLNDNTTYDD 569 TLH ++D +E I KQ +I EA++V+ + I D M+ EK+MAI YL D YD Sbjct: 513 GGKTLHVKYDTKSEEIKKKQKEISKEAERVVDSIITDDMTELEKEMAINQYLCDTAEYDM 572 Query: 570 AALENAKQQQFKSVDAKFNDSFSTYGILVKKVGVCMSYAHTFQLLSDLVQVPSMVVTGTM 629 ALENA++ F VDAKFNDSF+ YG+L+ K GVC SYA F+LL+ + +VVTG + Sbjct: 573 DALENAEENDFAGVDAKFNDSFTPYGVLLNKTGVCSSYAGAFKLLAQQAGLECIVVTGNL 632 Query: 630 DG-VNHAWNKVKIGGEWVNVDATNNETNSGLPYLLYNSNDATAANVDYVMDNSSWLDHEL 688 DG + HAWNK+KI GEW VD+TNN+ L LL N D A V V D LD ++ Sbjct: 633 DGELPHAWNKIKIDGEWRIVDSTNNDNELILNALL-NLPDYAADKV-LVEDERFVLDDKV 690 Query: 689 SLFQATSNAHDYYVTHGLEADSLEAYKTKLAEQLK---QGKTLIVLRVLADTDSAELTQK 745 ++A S+ ++Y G + K K+ E LK + + + VLR E + Sbjct: 691 KDYEAKSDDKEFYRIEGKFYE-----KNKIFEPLKNELKEEGIAVLRTDYTLSDKEFMKI 745 Query: 746 TAEVIKQYDASKLA 759 EV++ Y + +L Sbjct: 746 AQEVVEGYGSGELG 759 >A9KJ77.1 A9KJ77_CLOPH Transglutaminase domain protein Length = 773 Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 178/570 (31%), Positives = 266/570 (46%), Gaps = 83/570 (14%) Query: 134 WGNAPVYYIRLNYDLDAATPTPLKQPIIIPFTVKSDLPVPNLQADISPDGRLALVWSEVP 193 WG A YY+ YDL T L++P I FT++ +L P L+ +I DG + W E+P Sbjct: 158 WGYANTYYLAYFYDL--KTGEKLEKPQITIFTIERELKSPFLKYEIK-DGNIRYYWDEIP 214 Query: 194 GAESYNIYNASHITMENTN-EALSG---AEQGYADQRPLLIATVPGTSYNDFMKDGRGAL 249 GA Y + S + E T + LS A+ Y D+ L + ++ Sbjct: 215 GAVEYVL---SFVKKEETQFDFLSFKKVADLEYIDKDILEMGVHKLINFK---------- 261 Query: 250 GIVDETITSLQNNNVQGEYYVTAVQGDKESKFSASVDTVAL---SKQLPRTVAS------ 300 L ++N YYVT + DK+ S + + +++ QLP S Sbjct: 262 -------YRLNDDNDLNLYYVTVMAIDKDGNASNASNMISIDSFRNQLPFRALSLTEEGV 314 Query: 301 ---EDNLNLKLFKSAGELPKTVPVQYIDGSKAPGTVIYDTDSITIQQSGPTDVQFSIQG- 356 D +NL L V+ DGS TV YD + I Q +D+ F+++G Sbjct: 315 SSIADQINL--------LGNRRLVEMCDGSTVLYTVTYDIEHARITQ--LSDIVFNLEGE 364 Query: 357 ----TALKGYVQVEKLTDADIASLAAAQSKGANQGYVEPQNNTDYVPAPDVPTIIDNNGN 412 AL Y+ TD + SL K ++ +E + Y + GN Sbjct: 365 DRTLLALDSYIDG---TDLKLISLV----KNFDEATMESELKLLYEQTQA------SKGN 411 Query: 413 AGESGDNVIDQQKENTRSKVDEGNKQAVPAPTIPADLIHAD-------SALEEYLALNLI 465 AG + E T + D+ + +V +PT ++ D SAL EYLA +++ Sbjct: 412 AG------VMNTPEFTLIEEDDTKESSVVSPTEDEIIVKNDNFPVFASSALTEYLARHML 465 Query: 466 SGKTEISLQAFPEAQNARTLVDEVEKVIYQNPLILGFRGYSYDYKTLTLHTEFDDPAEVI 525 + ISL+ F EA + L D + + IYQNPLILG + Y+ + TL E++ Sbjct: 466 LNEEIISLKDFKEASDIDLLWDSLYEAIYQNPLILGVSSFQYNRFSKTLMIEYEQDRAEQ 525 Query: 526 LSKQLKILAEADKVIAAAIKDGMSADEKQMAIYNYLNDNTTYDDAALENAKQQQFKSVDA 585 KQ +I E +V+ I M+ EK+ AI YL D YD AAL+NA + F D+ Sbjct: 526 EKKQEEIKKEVIRVVNEIITPQMTDIEKEFAINQYLCDIAEYDTAALDNAMENNFIP-DS 584 Query: 586 KFNDSFSTYGILVKKVGVCMSYAHTFQLLSDLVQVPSMVVTGTMDG-VNHAWNKVKIGGE 644 F DSF+ YG+L+ K GVC SYA F+LL++ + +V+TG ++G + HAWN+V + E Sbjct: 585 SFRDSFTPYGVLINKRGVCASYAAAFKLLAEQAGLNCLVITGNLNGNLPHAWNRVLVDNE 644 Query: 645 WVNVDATNNETNSGLPYLLYNSNDATAANV 674 W VD+TNN+ N L L N D+ AA V Sbjct: 645 WKTVDSTNND-NEELFNALLNLPDSVAAKV 673 >B1Q5I4.1 B1Q5I4_CLOBO Conserved domain protein Length = 503 Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 77/250 (30%), Positives = 122/250 (48%), Gaps = 29/250 (11%) Query: 436 NKQAVPAPTIPADLIHADSALEEYLALNLISG----KTEISLQAFPEAQNARTLVDEVEK 491 N + PAP + +YL N+++G K ++ A+ ++NA + +EK Sbjct: 27 NIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAY--SKNADEVFKVLEK 84 Query: 492 VIYQNPLILGFRGYSYDYKTLTLHTE------FDDPAEVILSKQLKILAEADKVIAAAIK 545 V+ +P I F DY+ + + + E I + + ++ + +I I Sbjct: 85 VLDDHPEIFYF-----DYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVIT 139 Query: 546 DGMSADEKQMAIYNYLNDNTTYDDAALENAKQQQFKSVDAKFNDSFSTYGILVKKVGVCM 605 MS EK+MAI++Y+ NT YD+ AL + F++YG LV VC Sbjct: 140 KDMSEFEKEMAIHDYIVLNTKYDEEALNGNISSEL---------IFTSYGCLVNNFAVCD 190 Query: 606 SYAHTFQLLSDLVQVPSMVVTGTMDGVNHAWNKVKIGGEWVNVDATNNE--TNSG-LPYL 662 YA T QLL + V V ++ VTG +GV+HAWN V+I G+ VDAT N+ +SG + Y Sbjct: 191 GYAKTMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDPVPDSGYVRYK 250 Query: 663 LYNSNDATAA 672 +N +DA A Sbjct: 251 YFNMSDADIA 260 >A5HYS7.1 A5HYS7_CLOBH Putative exported protein Length = 503 Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 29/250 (11%) Query: 436 NKQAVPAPTIPADLIHADSALEEYLALNLISG----KTEISLQAFPEAQNARTLVDEVEK 491 N + PAP + +YL N+++G K ++ A+ ++NA + +EK Sbjct: 27 NIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAY--SKNADEVFKVLEK 84 Query: 492 VIYQNPLILGFRGYSYDYKTLTLHTE------FDDPAEVILSKQLKILAEADKVIAAAIK 545 V+ +P I F DY+ + + + E I + + ++ + +I I Sbjct: 85 VLDDHPEIFYF-----DYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVIT 139 Query: 546 DGMSADEKQMAIYNYLNDNTTYDDAALENAKQQQFKSVDAKFNDSFSTYGILVKKVGVCM 605 MS EK+MAI++Y+ NT YD+ AL + F++YG LV VC Sbjct: 140 KDMSELEKEMAIHDYIVLNTKYDEEALNGNISSEL---------IFTSYGCLVNNFAVCD 190 Query: 606 SYAHTFQLLSDLVQVPSMVVTGTMDGVNHAWNKVKIGGEWVNVDATNNE--TNSG-LPYL 662 YA QLL + V V ++ VTG +GV+HAWN V+I G+ VDAT N+ +SG + Y Sbjct: 191 GYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDPVPDSGYVRYK 250 Query: 663 LYNSNDATAA 672 +N +DA A Sbjct: 251 YFNMSDADIA 260 >B1IDE2.1 B1IDE2_CLOBK Conserved domain protein Length = 503 Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 76/250 (30%), Positives = 121/250 (48%), Gaps = 29/250 (11%) Query: 436 NKQAVPAPTIPADLIHADSALEEYLALNLISG----KTEISLQAFPEAQNARTLVDEVEK 491 N + PAP + +YL N+++G K ++ A+ ++NA + +EK Sbjct: 27 NIKKYPAPDVEKRSYSTTVTYNKYLYDNILNGLINLKDKVDTSAY--SKNADEVFKVLEK 84 Query: 492 VIYQNPLILGFRGYSYDYKTLTLHTE------FDDPAEVILSKQLKILAEADKVIAAAIK 545 V+ +P I F DY+ + + + E I + + ++ + +I I Sbjct: 85 VLDDHPEIFYF-----DYENCSFWSNGILELGYRGNKETINTMRQQLDTKVQSIINNVIT 139 Query: 546 DGMSADEKQMAIYNYLNDNTTYDDAALENAKQQQFKSVDAKFNDSFSTYGILVKKVGVCM 605 MS EK+MAI++Y+ NT YD+ AL + F++YG LV VC Sbjct: 140 KDMSELEKEMAIHDYIVLNTKYDEEALNGNISSEL---------IFTSYGCLVNNFAVCD 190 Query: 606 SYAHTFQLLSDLVQVPSMVVTGTMDGVNHAWNKVKIGGEWVNVDATNNE--TNSG-LPYL 662 YA QLL + V V ++ VTG +GV+HAWN V+I G+ VDAT N+ +SG + Y Sbjct: 191 GYAKAMQLLLNKVGVYTIRVTGDGNGVSHAWNIVRINGKNYQVDATWNDPVPDSGYVRYK 250 Query: 663 LYNSNDATAA 672 +N +DA A Sbjct: 251 YFNMSDADIA 260 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.311 0.129 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,592,887,098 Number of extensions: 201604805 Number of successful extensions: 421170 Number of sequences better than 1.0e-05: 238 Number of HSP's gapped: 421026 Number of HSP's successfully gapped: 238 Length of query: 774 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 630 Effective length of database: 1,704,070,043 Effective search space: 1073564127090 Effective search space used: 1073564127090 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 135 (56.6 bits)