BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0050.p (337 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DCK1.1 B1DCK1_9BACL Glycosyl transferase family 2 373 e-101 C4ILD7.1 C4ILD7_CLOBU Dolichyl-phosphate beta-D-mannosyltransferase 286 2e-75 B1QS55.1 B1QS55_CLOBU Glycosyl transferase 286 2e-75 B8HFZ2.1 B8HFZ2_ARTCA Glycosyltransferase 272 4e-71 C2LR39.1 C2LR39_STRSL Glycosyl transferase, group 2 family EC=2.... 262 3e-68 >B1DCK1.1 B1DCK1_9BACL Glycosyl transferase family 2 Length = 337 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 232/338 (68%), Gaps = 2/338 (0%) Query: 1 MTILIPAYEPDERLLDLIEQLCDYQLG-PIVLVDDGSGPAYQGIFNIAAAFGCTVLTHPV 59 MTILIP+YEPDERLL LI L + G I++VDDGSG Y+ IF+ AA GCTVL HPV Sbjct: 1 MTILIPSYEPDERLLTLIHHLKEETEGTSILIVDDGSGERYKPIFDSAAEAGCTVLRHPV 60 Query: 60 NFGKGLALKTGLRYIREAGLPGYVVCADSDGQHLPHDIKRIAGVLQNQTTPGIVLGSRRF 119 N GKG ALKTG Y+R+ G V+CADSDGQHLP DI RI ++ IVLGSR+F Sbjct: 61 NQGKGCALKTGFDYVRQHGGTDGVICADSDGQHLPEDILRITDAVRKNRN-HIVLGSRQF 119 Query: 120 SGTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFEYEMNML 179 +G VPLRSRFGNS TR+V++L TG I DTQTGLRG+S +MLDWLC++PGERFEYEMNML Sbjct: 120 TGKVPLRSRFGNSATRMVYALATGKPIQDTQTGLRGYSSEMLDWLCKVPGERFEYEMNML 179 Query: 180 LTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALLDFTLLF 239 L A + GY E I+TVYLE+N+SSHFRPLADS +IY P L F TSS SA++DF LLF Sbjct: 180 LEAPKAGYDFVEVPIETVYLENNKSSHFRPLADSAKIYFPFLKFVTSSGFSAVIDFVLLF 239 Query: 240 LFQRLTHNLFLSVAAARLCSSIFNYSMNRRYVFTGGKMSKLQQSLPKYFAXXXXXXXXXX 299 L Q +T +L SV AR+ SSIFN++MNRRYVF G+ +++SLP+YF+ Sbjct: 240 LLQWMTGSLLASVIGARVISSIFNFTMNRRYVFNDGQGISVRKSLPRYFSLVVIILVANY 299 Query: 300 XXXXXXXEXXXXXXXXXXXXTEASIFLFSYWAQRRFVY 337 E TE +F FSY QR+FVY Sbjct: 300 ALLYLFHESIGIPLFIAKLMTEVLLFAFSYLVQRKFVY 337 >C4ILD7.1 C4ILD7_CLOBU Dolichyl-phosphate beta-D-mannosyltransferase Length = 337 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 150/341 (43%), Positives = 200/341 (58%), Gaps = 9/341 (2%) Query: 1 MTILIPAYEPDERLLDLIEQL---CDYQLGPIVLVDDGSGPAYQGIFNIAAAFGCTVLTH 57 M ++IPAYEPDE+L+ L+ L C+++L +++DDGSG Y+ IF+ A+ G +V H Sbjct: 1 MIVIIPAYEPDEKLIKLVSDLKSKCNFKL---LIIDDGSGEKYESIFDKASNLGASVYHH 57 Query: 58 PVNFGKGLALKTGLRYIREAGLPGYVVCADSDGQHLPHDIKRIAGVLQNQTTPGIVLGSR 117 N GKG ALKT I+ ++ AD DGQH P DI +IA ++N ++LG R Sbjct: 58 NENKGKGAALKTAFSIIKNFDDAEEIITADCDGQHTPMDIIKIAQCIKNNKNK-LILGVR 116 Query: 118 RFSGTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFEYEMN 177 F+G VP RS GN +T +F L G KI DTQTGLRGFS M+ WLC I G +EYEMN Sbjct: 117 YFTGKVPFRSILGNKLTSRIFELINGEKISDTQTGLRGFSKSMIPWLCSIKGNGYEYEMN 176 Query: 178 MLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALLDFTL 237 MLL + + GY + E I+TVY+E+N SSHF PL DS RIY +L +S SS++S +LDF Sbjct: 177 MLLESEKYGYGIKEVPIETVYIENNTSSHFNPLIDSLRIYFQILKYSMSSILSGILDFIF 236 Query: 238 LFLFQRLTHNLFLSVAAARLCSSIFNYSMNRRYVFTGGKMS-KLQQSLPKYFAXXXXXXX 296 L + + LT NL LSV AR SS FNY MN+ YVF+ K SLP+Y Sbjct: 237 LLIIKALTSNLLLSVVIARFLSSSFNYVMNKNYVFSRNKEEFNTTLSLPRYIFLVITVLI 296 Query: 297 XXXXXXXXXXEXXXXXXXXXXXXTEASIFLFSYWAQRRFVY 337 TE ++F+FS+ Q+RFV+ Sbjct: 297 FNYIILDYLCS-LGVSLVIAKLLTECTLFIFSFVVQKRFVF 336 >B1QS55.1 B1QS55_CLOBU Glycosyl transferase Length = 337 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 150/341 (43%), Positives = 200/341 (58%), Gaps = 9/341 (2%) Query: 1 MTILIPAYEPDERLLDLIEQL---CDYQLGPIVLVDDGSGPAYQGIFNIAAAFGCTVLTH 57 M ++IPAYEPDE+L+ L+ L C+++L +++DDGSG Y+ IF+ A+ G +V H Sbjct: 1 MIVIIPAYEPDEKLIKLVSDLKSKCNFKL---LIIDDGSGEKYESIFDKASNLGASVYHH 57 Query: 58 PVNFGKGLALKTGLRYIREAGLPGYVVCADSDGQHLPHDIKRIAGVLQNQTTPGIVLGSR 117 N GKG ALKT I+ ++ AD DGQH P DI +IA ++N ++LG R Sbjct: 58 NENKGKGAALKTAFSIIKNFDDAEEIITADCDGQHTPMDIIKIAQCIKNNKNK-LILGVR 116 Query: 118 RFSGTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFEYEMN 177 F+G VP RS GN +T +F L G KI DTQTGLRGFS M+ WLC I G +EYEMN Sbjct: 117 YFTGKVPFRSILGNKLTSRIFELINGEKISDTQTGLRGFSKSMIPWLCSIKGNGYEYEMN 176 Query: 178 MLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALLDFTL 237 MLL + + GY + E I+TVY+E+N SSHF PL DS RIY +L +S SS++S +LDF Sbjct: 177 MLLESEKYGYGIKEVPIETVYIENNTSSHFNPLIDSLRIYFQILKYSMSSILSGILDFIF 236 Query: 238 LFLFQRLTHNLFLSVAAARLCSSIFNYSMNRRYVFTGGKMS-KLQQSLPKYFAXXXXXXX 296 L + + LT NL LSV AR SS FNY MN+ YVF+ K SLP+Y Sbjct: 237 LLIIKALTSNLLLSVVIARFLSSSFNYVMNKNYVFSRNKEEFNTTLSLPRYIFLVITVLI 296 Query: 297 XXXXXXXXXXEXXXXXXXXXXXXTEASIFLFSYWAQRRFVY 337 TE ++F+FS+ Q+RFV+ Sbjct: 297 FNYIILDYLCS-LGVSLVIAKLLTECTLFIFSFVVQKRFVF 336 >B8HFZ2.1 B8HFZ2_ARTCA Glycosyltransferase Length = 374 Score = 272 bits (695), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 145/296 (48%), Positives = 187/296 (63%), Gaps = 8/296 (2%) Query: 1 MTILIPAYEPDERLLDLIEQLCDYQ-LGPIVLVDDGSGPAYQGIFNIAAAFGCTVLTHPV 59 M ILIPAYEPD L LI ++ + +V+VDDGSGPAY+ +F+ A GC VL++ Sbjct: 1 MIILIPAYEPDHHLAALIRRIRAAEPWTAVVVVDDGSGPAYKDVFDDVRALGCHVLSYAR 60 Query: 60 NFGKGLALKTGLRYIREAGLPGY-VVCADSDGQHLPHDIKRIAGVLQNQT-----TPGIV 113 N GKG ALK G +I + LPG+ VVCADSDGQH D+ R+AG + + +V Sbjct: 61 NRGKGFALKAGFGFIAD-NLPGHDVVCADSDGQHTVTDVLRVAGKVHGNSGDQRGAATMV 119 Query: 114 LGSRRFSGTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFE 173 LGSR FSG VP RSR GN+ TR +F+L TG +I DTQTGLRG+ ML WL + G+R+E Sbjct: 120 LGSRSFSGNVPARSRLGNTATRALFTLATGERIPDTQTGLRGYPAAMLPWLRSVRGDRYE 179 Query: 174 YEMNMLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALL 233 YE+N+LL A GY++ I TVYL+ N SHFRPLADS RIY PLL F SS + L+ Sbjct: 180 YELNLLLEAKNAGYSIQSLDIATVYLDHNSGSHFRPLADSARIYAPLLKFLGSSFTAFLV 239 Query: 234 DFTLLFLFQRLTHNLFLSVAAARLCSSIFNYSMNRRYVFTGGKMSKLQQSLPKYFA 289 D T+ L L +L L+V AR SS N+ +NR VF GK + + +YF+ Sbjct: 240 DTTVFLLLTVLVDSLLLAVLGARAVSSAVNFLVNRHVVFEHGKQRPARSAGLRYFS 295 >C2LR39.1 C2LR39_STRSL Glycosyl transferase, group 2 family EC=2.4.-.- Length = 340 Score = 262 bits (670), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 138/294 (46%), Positives = 189/294 (64%), Gaps = 9/294 (3%) Query: 1 MTILIPAYEPDERLLDLIEQL-CDYQLGPIVLVDDGSGPAYQGIFNIAAAFGCTVLTHPV 59 M I+IPAYEPD+RL+ +++ + I++V+DGSGP Y ++ A G TVLTHP+ Sbjct: 1 MYIIIPAYEPDKRLIQVVQDITIKLPKARIIVVNDGSGPGYNDYYDETAFIGATVLTHPI 60 Query: 60 NFGKGLALKTGLRYIREAGLPGY-----VVCADSDGQHLPHDIKRIAGVLQNQTTPGIVL 114 N GKG ALKT +I+E + + +V DSDGQHL DI R+A ++ + +VL Sbjct: 61 NKGKGAALKTAFAHIQEEVVSQHLSAQPIVTVDSDGQHLIKDIVRVAKAIEENPS-HLVL 119 Query: 115 GSRRFSGTVPLRSRFGNSVTRVVFSLTTGTKIYDTQTGLRGFSPQMLDWLCQIPGERFEY 174 G+R F G VP RSRFGN VT +F L TG K+ DTQTGLRG S ++ WL + G RFEY Sbjct: 120 GARAFVGKVPARSRFGNKVTAGLFRLVTGQKVTDTQTGLRGMSTDLIPWLLNLDGNRFEY 179 Query: 175 EMNMLLTAHREGYTVTEEFIDTVYLEDNQSSHFRPLADSFRIYLPLLMFSTSSLVSALLD 234 E NMLL A + G+ ++E I+TVYLE+N+SSHFRP+ DS RIY P L FS ++++++++D Sbjct: 180 EFNMLLEAKKSGHQISEVPIETVYLEENKSSHFRPIRDSIRIYSPFLKFSGTAVLASVID 239 Query: 235 FTLLFLFQRLTHNLFLSVAAARLCSSIFNYSMNRRYVFTGGKMSKLQQSLPKYF 288 T LF+ LT NL LSV AR+ S+ +N VF S L +S +YF Sbjct: 240 ATALFVLFALTKNLLLSVVLARVISASSQCLLNANVVF--NPTSSLFRSSVRYF 291 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.141 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,817,329,007 Number of extensions: 72650801 Number of successful extensions: 204023 Number of sequences better than 1.0e-05: 456 Number of HSP's gapped: 203709 Number of HSP's successfully gapped: 456 Length of query: 337 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 201 Effective length of database: 1,779,438,163 Effective search space: 357667070763 Effective search space used: 357667070763 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 131 (55.1 bits)