BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0030.p (196 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9E433.1 B9E433_CLOK1 Putative uncharacterized protein 263 6e-69 A5N062.1 A5N062_CLOK5 PhzA EC=3.3.2.1 263 6e-69 B8GI59.1 B8GI59_METPE Isochorismatase hydrolase 258 1e-67 A6LXB9.1 A6LXB9_CLOB8 Isochorismatase hydrolase 248 2e-64 Q97TR7.1 Y4030_CLOAB Uncharacterized isochorismatase family prot... 248 2e-64 >B9E433.1 B9E433_CLOK1 Putative uncharacterized protein Length = 194 Score = 263 bits (672), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 122/190 (64%), Positives = 150/190 (78%), Gaps = 2/190 (1%) Query: 5 KEPEELNAATTALVVIDLQNGIASTGRELHPYPVEQVIRNADNLVKAFTEKGAFVVLVRV 64 +E E + + TALV+IDLQNGI + REL P+ +V++NA L+ AFTEKGAFVVLVRV Sbjct: 7 RETELIKSEKTALVIIDLQNGIVN--RELSPHTGVEVVQNASRLINAFTEKGAFVVLVRV 64 Query: 65 STLDGKDMLKPKTDLQVNPPQYPEGWDQIVPELAKYQGTYTLAKHQWGAFFGTDLDLQLR 124 S++DGKDMLKP D ++NP Q+PEGWD VPE+A + +T+ K QWGAF+GTDLDLQLR Sbjct: 65 SSIDGKDMLKPSVDFKINPTQFPEGWDSYVPEIANNKNVHTITKRQWGAFYGTDLDLQLR 124 Query: 125 RRGIRTIVLCGISTSIGVDTTAREAYQLGYDQVFAEDAMGASSREEHEFVCKTIFSRIGR 184 RRGI TIVLCGIST IGVDTTAREA+Q GY+Q+F EDAM A S+EEH++VCK IF RIG+ Sbjct: 125 RRGIDTIVLCGISTGIGVDTTAREAFQHGYNQIFVEDAMTAGSKEEHDYVCKHIFPRIGK 184 Query: 185 IRTSAEAAAS 194 +R S E S Sbjct: 185 LRRSEEIVLS 194 >A5N062.1 A5N062_CLOK5 PhzA EC=3.3.2.1 Length = 194 Score = 263 bits (672), Expect = 6e-69, Method: Compositional matrix adjust. Identities = 122/190 (64%), Positives = 150/190 (78%), Gaps = 2/190 (1%) Query: 5 KEPEELNAATTALVVIDLQNGIASTGRELHPYPVEQVIRNADNLVKAFTEKGAFVVLVRV 64 +E E + + TALV+IDLQNGI + REL P+ +V++NA L+ AFTEKGAFVVLVRV Sbjct: 7 RETELIKSEKTALVIIDLQNGIVN--RELSPHTGVEVVQNASRLINAFTEKGAFVVLVRV 64 Query: 65 STLDGKDMLKPKTDLQVNPPQYPEGWDQIVPELAKYQGTYTLAKHQWGAFFGTDLDLQLR 124 S++DGKDMLKP D ++NP Q+PEGWD VPE+A + +T+ K QWGAF+GTDLDLQLR Sbjct: 65 SSIDGKDMLKPSVDFKINPTQFPEGWDSYVPEIANNKNVHTITKRQWGAFYGTDLDLQLR 124 Query: 125 RRGIRTIVLCGISTSIGVDTTAREAYQLGYDQVFAEDAMGASSREEHEFVCKTIFSRIGR 184 RRGI TIVLCGIST IGVDTTAREA+Q GY+Q+F EDAM A S+EEH++VCK IF RIG+ Sbjct: 125 RRGIDTIVLCGISTGIGVDTTAREAFQHGYNQIFVEDAMTAGSKEEHDYVCKHIFPRIGK 184 Query: 185 IRTSAEAAAS 194 +R S E S Sbjct: 185 LRRSEEIVLS 194 >B8GI59.1 B8GI59_METPE Isochorismatase hydrolase Length = 198 Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 124/188 (65%), Positives = 145/188 (77%), Gaps = 2/188 (1%) Query: 9 ELNAATTALVVIDLQNGIASTGRELHPYPVEQVIRNADNLVKAFTEKGAFVVLVRVSTLD 68 EL A TALVVID+Q GI + R+ P+ EQV+ NA LV+AFTEKGAFVVLVRVST+D Sbjct: 11 ELKAEKTALVVIDMQKGIVN--RQHAPHTSEQVVLNASRLVQAFTEKGAFVVLVRVSTVD 68 Query: 69 GKDMLKPKTDLQVNPPQYPEGWDQIVPELAKYQGTYTLAKHQWGAFFGTDLDLQLRRRGI 128 G+DML+P+TD NP +P+GWD VPEL + + + K QWGAF+GTDLDLQLRRRGI Sbjct: 69 GRDMLRPRTDATTNPVPFPDGWDAFVPELEHFDQVHVITKRQWGAFYGTDLDLQLRRRGI 128 Query: 129 RTIVLCGISTSIGVDTTAREAYQLGYDQVFAEDAMGASSREEHEFVCKTIFSRIGRIRTS 188 TIVLCGIST IGVDTTAREA+Q GYDQ+F EDAM AS+ EEHE+VC IF RIGRIRTS Sbjct: 129 DTIVLCGISTGIGVDTTAREAFQRGYDQIFVEDAMTASTEEEHEYVCTHIFPRIGRIRTS 188 Query: 189 AEAAASLT 196 E L+ Sbjct: 189 EEVVGLLS 196 >A6LXB9.1 A6LXB9_CLOB8 Isochorismatase hydrolase Length = 198 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 123/193 (63%), Positives = 152/193 (78%) Query: 3 NVKEPEELNAATTALVVIDLQNGIASTGRELHPYPVEQVIRNADNLVKAFTEKGAFVVLV 62 + E E +NA T+ALV+IDLQ GIA G P+ ++QVI+NA LVK F EKGAF+VLV Sbjct: 5 KLNEKELINAKTSALVLIDLQKGIAGGGISGSPHLMDQVIQNASKLVKEFGEKGAFIVLV 64 Query: 63 RVSTLDGKDMLKPKTDLQVNPPQYPEGWDQIVPELAKYQGTYTLAKHQWGAFFGTDLDLQ 122 RVST+DGKDM+KPKTDL + +Y EGWD++VPE+A + + + K QWGAF+GTDLDLQ Sbjct: 65 RVSTVDGKDMVKPKTDLASSGMKYQEGWDELVPEIAGTKNVHIVTKRQWGAFYGTDLDLQ 124 Query: 123 LRRRGIRTIVLCGISTSIGVDTTAREAYQLGYDQVFAEDAMGASSREEHEFVCKTIFSRI 182 LRRRGI TIVL GISTSIGVDTTAREA+Q GY+Q+F EDAM A ++EEHE+VCK IF RI Sbjct: 125 LRRRGIDTIVLGGISTSIGVDTTAREAFQHGYNQIFLEDAMTAVTKEEHEYVCKYIFPRI 184 Query: 183 GRIRTSAEAAASL 195 G+IRTS + + L Sbjct: 185 GKIRTSEQVISLL 197 >Q97TR7.1 Y4030_CLOAB Uncharacterized isochorismatase family protein CA_P0030 EC=3.-.-.- Length = 187 Score = 248 bits (634), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 120/188 (63%), Positives = 142/188 (75%), Gaps = 2/188 (1%) Query: 8 EELNAATTALVVIDLQNGIASTGRELHPYPVEQVIRNADNLVKAFTEKGAFVVLVRVSTL 67 E L TALVVIDLQ GI + E PY ++V+ A LVKAFT+KGAFVVLV+VST+ Sbjct: 2 ENLEIEKTALVVIDLQKGIVAG--EHAPYTGKEVVEKASKLVKAFTDKGAFVVLVKVSTI 59 Query: 68 DGKDMLKPKTDLQVNPPQYPEGWDQIVPELAKYQGTYTLAKHQWGAFFGTDLDLQLRRRG 127 DGKDMLKPK D ++N + PEGWD VPE++ + TY + K QWGAF+GTDLDLQLRRRG Sbjct: 60 DGKDMLKPKLDSEINQIKRPEGWDSYVPEISNIKNTYAITKRQWGAFYGTDLDLQLRRRG 119 Query: 128 IRTIVLCGISTSIGVDTTAREAYQLGYDQVFAEDAMGASSREEHEFVCKTIFSRIGRIRT 187 I T+VLCGIST IGVDTTAREA+Q GY+Q+F EDAM A SREEH +VCK IF R+GRIR Sbjct: 120 IDTMVLCGISTGIGVDTTAREAFQHGYNQIFVEDAMTARSREEHAYVCKYIFPRLGRIRN 179 Query: 188 SAEAAASL 195 + E L Sbjct: 180 TEEILEQL 187 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,095,623,335 Number of extensions: 43394164 Number of successful extensions: 104535 Number of sequences better than 1.0e-05: 1006 Number of HSP's gapped: 104173 Number of HSP's successfully gapped: 1008 Length of query: 196 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 67 Effective length of database: 1,845,385,268 Effective search space: 123640812956 Effective search space used: 123640812956 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)