BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0026.p (303 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2W868.1 C2W868_BACCE Oxidoreductase 136 3e-30 Q8ETK8.1 Q8ETK8_OCEIH Oxidoreductase 105 7e-21 C4Z6G6.1 C4Z6G6_9FIRM Putative uncharacterized protein 69 5e-10 B7ASC8.1 B7ASC8_9BACE Putative uncharacterized protein 69 7e-10 B0KCN9.1 B0KCN9_THEP3 Putative uncharacterized protein 67 2e-09 >C2W868.1 C2W868_BACCE Oxidoreductase Length = 436 Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 77/232 (33%), Positives = 133/232 (57%), Gaps = 7/232 (3%) Query: 71 ISYNNGKTKVKAPLTLNPGYDEESGMTADG---SGFFISTDKTAIVYGGSRAIPVQVLIT 127 ++Y+ KT P+T++ E+ + + ++IS +KTA V+GG + PV+V ++ Sbjct: 202 VTYDEKKTFKNVPITIDQFMREDGRVNEEELQEGSYYISKEKTAFVHGGHHS-PVKVTMS 260 Query: 128 NDQGKTWNTYPVTKEVTGTTKN-IGFINKNDGWMILSSFKGMGSEDHYLYKTRDGGKTWN 186 +D+GKTW T V ++ + IGF ++ +G+++++ + M E + +Y+T DGGK W Sbjct: 261 DDEGKTWKTVTVGDDIDNRRLSFIGFTSQENGYIVITGDRTMSFETNVVYQTNDGGKMWT 320 Query: 187 EVKGNANEVYARVLTGAGFANDKIGFMGFRYETDFQPAVCWTQDGGKSWTKLHLKLPGGF 246 ++ G+ ++ + TG FA D+IGF+ F+ T+ P V T+DGGK+W KL +KLP + Sbjct: 321 KM-GSTYDLTQFLATGVSFATDQIGFITFK-TTNGDPDVYRTEDGGKTWAKLDIKLPNKY 378 Query: 247 EEYSLTPLSPVFDGARGQFPVQLSKDGASNVVGTIYLTSSNYGKTWKYQKLV 298 + + P FDGARG V + G L S ++G TW ++K+V Sbjct: 379 HSVFTSVMPPFFDGARGTLLVSQDEGGMDREGKMARLVSEDFGATWTFEKIV 430 >Q8ETK8.1 Q8ETK8_OCEIH Oxidoreductase Length = 429 Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 74/251 (29%), Positives = 127/251 (50%), Gaps = 23/251 (9%) Query: 61 YTLDKDGHVMISYNNGKTKVKAPLTLNPGYD-----EESGMTADGSGFFISTDKTAIVYG 115 Y ++ D + I+Y+NG+T + P+ +N ++ E+ + D + IS +T + G Sbjct: 181 YRIEND-KLEITYDNGETWKEVPVEINRLFEGDYNGPENELIEDS--YLISPQRTVFIVG 237 Query: 116 GSRAIPVQVLITNDQGKTWNTYPVTKEVTGT-TKNIGFINKNDGWMILSSFKGMGSEDHY 174 G+ I V + + DQG+ W T + + G + I FI++N+G++IL+ + M E + Sbjct: 238 GNENIAV--MQSTDQGENWETTTIPAVIQGIRIRIIDFISENNGFLILTGGRTMSWEGNI 295 Query: 175 LYKTRDGGKTWNEVKGNANEVYARVLTGAGFANDKIGFMGF----RYETDFQPAVCWTQD 230 +YKT DGGKTW E N R +T GF ++++GF+ F E+ P + T D Sbjct: 296 IYKTEDGGKTWEEA---GNVPTERQVTSGGFIDEELGFVSFGAINVNESPGMPDIYRTAD 352 Query: 231 GGKSWTKLHLKLPGGFEEYSLTPLSPVFDGARGQFPVQLSKDG---ASNVVGTIYLTSSN 287 GG +W+K+ + +P ++ +P FD ++G V +G NV S + Sbjct: 353 GGNTWSKIEVPIPAEYQGIFTVAETPTFDDSQGTMLVNQGPNGDYQGGNVKAK--FVSVD 410 Query: 288 YGKTWKYQKLV 298 G TW + LV Sbjct: 411 DGATWSFANLV 421 >C4Z6G6.1 C4Z6G6_9FIRM Putative uncharacterized protein Length = 475 Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 11/184 (5%) Query: 65 KDGHVMISYNNGKTKVKAPLTLN-PGYDEESGMTADGSGFFISTDKTAIVYGGSRA---- 119 K+ + ++Y+ G+ + P++ + Y++ S + + I+T KTA VYGG A Sbjct: 203 KENSLYVTYDGGEKYITVPVSYSYLLYEDNSTTSLKQDSYMITTGKTAFVYGGKTANSTK 262 Query: 120 IPVQVLITNDQGKTWNTYPVTKEVTGTTKNIGFINKNDGWMILSSFKGMGS-EDHYLYKT 178 +PV V+ ++D+G+ W T + + F + ++G ++ K + E +YKT Sbjct: 263 VPVTVIYSDDKGENWTTCELDNIYNADYYYVKFFDSDNGVVVCGYAKSNDTNESSKIYKT 322 Query: 179 RDGGKTWNEV-KGNANEVYARVLTGAGFANDKIGFMGFRYETDFQPAVCWTQDGGKSWTK 237 +GG++W+ V G A ++ G + + +GF + Y + T DGGK++ K Sbjct: 323 SNGGESWDMVGSGPA----TNIIKGVVYVSADVGFFCYDYVDGMDSNLYKTDDGGKTFAK 378 Query: 238 LHLK 241 + L+ Sbjct: 379 VMLE 382 >B7ASC8.1 B7ASC8_9BACE Putative uncharacterized protein Length = 478 Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 7/154 (4%) Query: 92 EESGMTADGSGFFISTDKTAIVYGG----SRAIPVQVLITNDQGKTWNTYPVTKEVTGTT 147 E S D + I + A +YGG +++P+ V+ T D+G+ W + V + + Sbjct: 254 EASKKAVDEGIYVIDSQNAAFLYGGVAIGGKSVPLTVIFTKDKGEHWTSSQVAELTDVSF 313 Query: 148 KNIGFINKNDGWMILSSFKGMGSEDHYLYKTRDGGKTWNEVKGNANEVYARVLTGAGFAN 207 I ++ NDG ++ K + +YKT DGG+ W V A+ + GA F + Sbjct: 314 AYINMLSDNDGVIVAGYSKSQNMQGSQIYKTTDGGENWRLV---GTTPIAKAIVGAKFIS 370 Query: 208 DKIGFMGFRYETDFQPAVCWTQDGGKSWTKLHLK 241 GF+ ++Y++D + T DGG +++ + L+ Sbjct: 371 TSTGFITYKYDSDMATTLYATFDGGGTFSAVMLE 404 >B0KCN9.1 B0KCN9_THEP3 Putative uncharacterized protein Length = 333 Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 13/186 (6%) Query: 122 VQVLITNDQGKTWNTYPVTKEVTGTTKNI-GFINKNDGWMILSSFKGMGSEDHYLYKTRD 180 + +L T D G W+ + G ++ F+ +GW IL++ G G + +YL KT D Sbjct: 149 LHILKTKDGGLHWDIFKFEIGKYGEAISVLQFVTPEEGW-ILTTMNGAGMQINYLLKTND 207 Query: 181 GGKTWNEVKGNANEVYARVLTGAGFANDKI-----GFMGFRYETDFQPAVCWTQDGGKSW 235 GGKTW V + Y + + A +N K G++ P + T DGGKSW Sbjct: 208 GGKTWENVNITGKKNYDGIYSAADRSNMKFYNKNNGWISISNNLGPAPLLFRTTDGGKSW 267 Query: 236 TKLHLKLPGGFEEYSLTPLS-PVF-DGARGQFPVQL---SKDGASNVVGTIYLTSSNYGK 290 +K+ L +P ++ L+ + PVF D +G+ ++L +KD +Y T G Sbjct: 268 SKIELSVPEIYKNCYLSSANVPVFADNKQGKLILELYGPNKDNKLEKHILVYETIDG-GN 326 Query: 291 TWKYQK 296 TW+ +K Sbjct: 327 TWRLRK 332 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,974,654,155 Number of extensions: 90781335 Number of successful extensions: 183802 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 183904 Number of HSP's successfully gapped: 26 Length of query: 303 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 168 Effective length of database: 1,788,859,178 Effective search space: 300528341904 Effective search space used: 300528341904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)