BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0019.p (250 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8A9.1 B3K8A9_9BACI ABC transporter related 427 e-118 O34697.1 BCEA_BACSU Bacitracin export ATP-binding protein bceA 422 e-116 Q65D40.1 Q65D40_BACLD YtsC 422 e-116 Q9K619.1 BCEA_BACHD Bacitracin export ATP-binding protein bceA 414 e-114 Q8ES11.1 Q8ES11_OCEIH ABC transporter ATP-binding protein 413 e-114 >B3K8A9.1 B3K8A9_9BACI ABC transporter related Length = 253 Score = 427 bits (1097), Expect = e-118, Method: Compositional matrix adjust. Identities = 201/248 (81%), Positives = 233/248 (93%) Query: 2 ILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQG 61 ILEAN+I+K+YGNKFN+QEVLKGID++V KGEFV IMGASGSGKTTLLNVLSSID+VS G Sbjct: 3 ILEANQIHKSYGNKFNKQEVLKGIDIRVDKGEFVSIMGASGSGKTTLLNVLSSIDKVSLG 62 Query: 62 TIEIEGKEFTRMKEKQLAEFRKQHLGFIFQEYNLLDTLTVKENVLLPLSITGISRREAHQ 121 +I+IEGKEFT +KEK+LAEFRK HLGFIFQEYNLLDTLTVKENVLLPLSI +S++EA Q Sbjct: 63 SIKIEGKEFTGLKEKELAEFRKHHLGFIFQEYNLLDTLTVKENVLLPLSIKKVSKKEADQ 122 Query: 122 KFEQVAGELGIYELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDL 181 KF+++A ELGIYE+KDKYP +ISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDL Sbjct: 123 KFQRIATELGIYEIKDKYPNQISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDL 182 Query: 182 LNKLADMNTKRQATIVMVTHDAIAASYCSRVVFIRDGQIYTQLNKGDEARQSFFNDIMKT 241 LNKL+++N K +TI+MVTHD +AASYC+RVVFI+DGQIYTQLNKG+++RQ+FFNDI+KT Sbjct: 183 LNKLSELNQKIDSTIIMVTHDPVAASYCTRVVFIKDGQIYTQLNKGEQSRQAFFNDIIKT 242 Query: 242 QSVLGGVQ 249 Q VLGGVQ Sbjct: 243 QGVLGGVQ 250 >O34697.1 BCEA_BACSU Bacitracin export ATP-binding protein bceA Length = 253 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 200/250 (80%), Positives = 225/250 (90%) Query: 1 MILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQ 60 +ILEANKI K+YGNK N+QEVLKGID+ + KGEFV IMGASGSGKTTLLNVLSSID+VS Sbjct: 2 VILEANKIRKSYGNKLNKQEVLKGIDIHIEKGEFVSIMGASGSGKTTLLNVLSSIDQVSH 61 Query: 61 GTIEIEGKEFTRMKEKQLAEFRKQHLGFIFQEYNLLDTLTVKENVLLPLSITGISRREAH 120 GTI I G + T MKEKQLAEFRKQHLGFIFQ+YNLLDTLTVKEN+LLPLSIT +S++EA+ Sbjct: 62 GTIHINGNDMTAMKEKQLAEFRKQHLGFIFQDYNLLDTLTVKENILLPLSITKLSKKEAN 121 Query: 121 QKFEQVAGELGIYELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASD 180 +KFE+VA ELGIYEL+DKYP EISGGQKQRTSA RAFIHDPSIIFADEPTGALDSKSASD Sbjct: 122 RKFEEVAKELGIYELRDKYPNEISGGQKQRTSAGRAFIHDPSIIFADEPTGALDSKSASD 181 Query: 181 LLNKLADMNTKRQATIVMVTHDAIAASYCSRVVFIRDGQIYTQLNKGDEARQSFFNDIMK 240 LLNKL+ +N KR ATI+MVTHD +AASYC RV+FI+DGQ+YTQLNKG + RQ+FF DIMK Sbjct: 182 LLNKLSQLNQKRNATIIMVTHDPVAASYCGRVIFIKDGQMYTQLNKGGQDRQTFFQDIMK 241 Query: 241 TQSVLGGVQQ 250 TQ VLGGVQ Sbjct: 242 TQGVLGGVQH 251 >Q65D40.1 Q65D40_BACLD YtsC Length = 253 Score = 422 bits (1084), Expect = e-116, Method: Compositional matrix adjust. Identities = 206/250 (82%), Positives = 223/250 (89%) Query: 1 MILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQ 60 MILEA KI K+YGNK N+ EVLKGIDLQ+ KGEFV IMG SGSGKTTLLNVLSSID+VS Sbjct: 2 MILEAKKIRKSYGNKHNKHEVLKGIDLQIQKGEFVSIMGPSGSGKTTLLNVLSSIDQVSG 61 Query: 61 GTIEIEGKEFTRMKEKQLAEFRKQHLGFIFQEYNLLDTLTVKENVLLPLSITGISRREAH 120 GTI I E T MKEKQLAEFRKQHLGFIFQEYNLLDTLTVKEN+LLPLSIT IS++EA Sbjct: 62 GTININQAEMTNMKEKQLAEFRKQHLGFIFQEYNLLDTLTVKENILLPLSITKISKKEAG 121 Query: 121 QKFEQVAGELGIYELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASD 180 QKFE+VA ELGI+ELKDKYP EISGGQKQRTSAARAFIH+PSIIFADEPTGALDSKSASD Sbjct: 122 QKFEEVAKELGIFELKDKYPNEISGGQKQRTSAARAFIHEPSIIFADEPTGALDSKSASD 181 Query: 181 LLNKLADMNTKRQATIVMVTHDAIAASYCSRVVFIRDGQIYTQLNKGDEARQSFFNDIMK 240 LLNKL+ +N KR+ATIVMVTHD +AAS+CSRVVFI+DGQIYTQLNKG + RQ FF DIMK Sbjct: 182 LLNKLSQLNQKRRATIVMVTHDPVAASFCSRVVFIKDGQIYTQLNKGGQDRQMFFQDIMK 241 Query: 241 TQSVLGGVQQ 250 TQ VLGGVQ Sbjct: 242 TQGVLGGVQH 251 >Q9K619.1 BCEA_BACHD Bacitracin export ATP-binding protein bceA Length = 253 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 197/248 (79%), Positives = 224/248 (90%) Query: 2 ILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQG 61 ILEA I+K+YG K N+QEVLKGID++V KGEFV IMGASGSGKTTLLNVLSSID++S G Sbjct: 3 ILEATNIHKSYGTKLNKQEVLKGIDIRVEKGEFVSIMGASGSGKTTLLNVLSSIDKLSNG 62 Query: 62 TIEIEGKEFTRMKEKQLAEFRKQHLGFIFQEYNLLDTLTVKENVLLPLSITGISRREAHQ 121 +I+IEG E TR+KEK+LA+FRK+HLGFIFQEYNLLDTLTVKEN+LLPLSIT I R+ A + Sbjct: 63 SIKIEGSEMTRLKEKELAQFRKKHLGFIFQEYNLLDTLTVKENILLPLSITKIPRKAADE 122 Query: 122 KFEQVAGELGIYELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDL 181 KF+QVA ELGIYE+KDKYP EISGGQKQR SAARAFIH+PSIIFADEPTGALDSKSASDL Sbjct: 123 KFKQVATELGIYEIKDKYPNEISGGQKQRASAARAFIHEPSIIFADEPTGALDSKSASDL 182 Query: 182 LNKLADMNTKRQATIVMVTHDAIAASYCSRVVFIRDGQIYTQLNKGDEARQSFFNDIMKT 241 L KL +N K +ATIVMVTHD +AASYCSRV+FI+DGQIYTQL+KGDE+RQ+FF DIMKT Sbjct: 183 LGKLQQLNEKLRATIVMVTHDPVAASYCSRVIFIKDGQIYTQLHKGDESRQTFFKDIMKT 242 Query: 242 QSVLGGVQ 249 Q VLGGVQ Sbjct: 243 QGVLGGVQ 250 >Q8ES11.1 Q8ES11_OCEIH ABC transporter ATP-binding protein Length = 254 Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust. Identities = 194/249 (77%), Positives = 227/249 (91%) Query: 2 ILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQG 61 IL+A +IYK+YGNKFNRQEVLKGIDL V K EFVGIMGASGSGKTTLLNVLSSID+VSQG Sbjct: 4 ILQAQQIYKSYGNKFNRQEVLKGIDLTVDKREFVGIMGASGSGKTTLLNVLSSIDKVSQG 63 Query: 62 TIEIEGKEFTRMKEKQLAEFRKQHLGFIFQEYNLLDTLTVKENVLLPLSITGISRREAHQ 121 I+IEGKEFT MK+KQ+AEFRKQHLGFIFQEYNLLDTLTVKEN+LLPL++ IS ++A Sbjct: 64 KIQIEGKEFTSMKDKQIAEFRKQHLGFIFQEYNLLDTLTVKENILLPLTVQKISNKDAQI 123 Query: 122 KFEQVAGELGIYELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDL 181 +F+QVA EL I++++DKYP EISGGQKQRTSAARAFIH+PS+IFADEPTGALDSK+AS+L Sbjct: 124 RFQQVAQELEIFDIRDKYPNEISGGQKQRTSAARAFIHNPSMIFADEPTGALDSKAASNL 183 Query: 182 LNKLADMNTKRQATIVMVTHDAIAASYCSRVVFIRDGQIYTQLNKGDEARQSFFNDIMKT 241 LN+L D+N KR +TIVMVTHD +AASYCSRV+FI+DG+IY+QLNKGDE R+SFF+DI+KT Sbjct: 184 LNRLVDLNEKRASTIVMVTHDPLAASYCSRVIFIKDGRIYSQLNKGDETRKSFFDDIIKT 243 Query: 242 QSVLGGVQQ 250 Q VLGGV Sbjct: 244 QGVLGGVHH 252 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,318,169,429 Number of extensions: 50130249 Number of successful extensions: 491416 Number of sequences better than 1.0e-05: 96205 Number of HSP's gapped: 380891 Number of HSP's successfully gapped: 103859 Length of query: 250 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 118 Effective length of database: 1,817,122,223 Effective search space: 214420422314 Effective search space used: 214420422314 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 129 (54.3 bits)