BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0567.0018.p (645 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K8B0.1 B3K8B0_9BACI Putative uncharacterized protein 717 0.0 Q65D41.1 Q65D41_BACLD YtsD 684 0.0 O34741.1 BCEB_BACSU Bacitracin export permease protein bceB 674 0.0 Q9K618.1 BCEB_BACHD Bacitracin export permease protein bceB 660 0.0 Q2BDG6.1 Q2BDG6_9BACI ABC transporter (Permease) 658 0.0 >B3K8B0.1 B3K8B0_9BACI Putative uncharacterized protein Length = 649 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/658 (58%), Positives = 478/658 (72%), Gaps = 22/658 (3%) Query: 1 MSINYIILLNLRKNIKNYYLYVFALVFGVALYFSFVTLKYDPSLDIVAGSIKXXXXXXXX 60 M+INY+I NL+KNIKNYYLYVFAL+F V LYF+FVTL+YDP++D GSIK Sbjct: 1 MNINYLIYRNLKKNIKNYYLYVFALIFSVGLYFAFVTLQYDPAMDEAKGSIKGAAALGAA 60 Query: 61 XXXXXXXXXXXXXYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMLLGI 120 YANTIFIKRRS+EIGLFQLIGLTKGKIF++LSAENLILYFGSM++GI Sbjct: 61 SVLLVAIVAIFLLYANTIFIKRRSKEIGLFQLIGLTKGKIFRILSAENLILYFGSMVIGI 120 Query: 121 GAGFAVSRLILMILFKILAIESVAKLRFSMEALQQTVIVFAGIYLLIMLMNYTFIKAQSI 180 AGFA SRLILMILFK+ +++ A L FS EAL QTVIVFA IY+LIM+MNYTFIK QSI Sbjct: 121 FAGFAASRLILMILFKVTGVDTEAALSFSTEALIQTVIVFAVIYVLIMIMNYTFIKRQSI 180 Query: 181 LSLFKVSSTAQERIRKMPLWEIVLGLLGIGCIASGYYLSTLLFSGKLDDMTRLMTSMIVI 240 LSLF+ ST + +I+KM E++ GLLGIG I GYY+ST LFSG M L +MI+I Sbjct: 181 LSLFRAVSTTENQIKKMSFAEMLFGLLGIGLILLGYYVSTKLFSGDFTTMNELFMAMILI 240 Query: 241 LGLVIIGTYLFYKGTVSFVFNAIRKSKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVS 300 LG VIIGTYLFYKG+VSF+FNAIRKSK GYL++N VLSLSSIMFRMKSNALLLTIITTVS Sbjct: 241 LGAVIIGTYLFYKGSVSFIFNAIRKSKGGYLSLNNVLSLSSIMFRMKSNALLLTIITTVS 300 Query: 301 ALAIGLLSLSYIAYYSAGATAKDNSPDDFGFAQVEAKERFVQALDKAHIKYSEVHMQPIP 360 ALAIGLLSLSYI+YYSA +A+ N P+ F A + F+QAL I++ + I Sbjct: 301 ALAIGLLSLSYISYYSAEKSAEQNVPNHFAVADQKDFSTFIQALTDEDIEFKKTQRDVIQ 360 Query: 361 MEVDGSQIM--------EQGSRNTVISTLVVSDSSVEGVDLKPGEARIMGYYNNVLSSYM 412 + D S I+ + S + +I V+SD+SV+ D+ PGE G Y++ + +M Sbjct: 361 VNADLSDIIGASLEVSGQVDSGSMIIP--VISDASVKDKDVSPGETLFTG-YSDAIQQFM 417 Query: 413 TLKESGGVGFKTMNGTIEQQLTGISGKTIMPYFYSKGA-GVFVVDETVYEELAQGQDPKL 471 ++ +G + + + +Q+L G+ + + Y+Y+ G +VD+TV+++L Q DPK+ Sbjct: 418 AIQTTGEIELISPKQSFKQKLIGLDKEAYVSYYYASGGLPTAIVDQTVFDQLVQDLDPKI 477 Query: 472 RSAKGAAAADYFGIELADRSQLKDANQIFT----DQKPGEMSISQYEYKMNHRSGMGLIM 527 + Y GI++ D + + ANQIF +K G ++SQ E N +S MGL+M Sbjct: 478 QKKTNV----YHGIDIVDPTAINQANQIFKSLGISEKTG--NLSQTEMAFNQKSNMGLMM 531 Query: 528 FIVGFLGLTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGI 587 FIVGFLGLTFLITSGCILYFKQMDEGEEEK YTILRKLGFTQG+LL GIQ KQLFNFGI Sbjct: 532 FIVGFLGLTFLITSGCILYFKQMDEGEEEKPNYTILRKLGFTQGNLLTGIQIKQLFNFGI 591 Query: 588 PLVVGLSHSYFAVKSGWFFFGTEMLTPMIMVMLLYTVLYSVFGFLSVLYYKRVISESL 645 PLVVGLSHSYFAVKSGWFFFGTE+ PM+MVMLLYT LYS+FG LSV++YKRVI E+L Sbjct: 592 PLVVGLSHSYFAVKSGWFFFGTELWLPMVMVMLLYTALYSIFGLLSVMFYKRVIKEAL 649 >Q65D41.1 Q65D41_BACLD YtsD Length = 646 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/651 (55%), Positives = 469/651 (72%), Gaps = 11/651 (1%) Query: 1 MSINYIILLNLRKNIKNYYLYVFALVFGVALYFSFVTLKYDPSLDIVAGSIKXXXXXXXX 60 MSIN +I+ NL+KNI+NYYLYVFAL+F ALYF+FVTL+YDP+++ V SIK Sbjct: 1 MSINQLIIRNLKKNIRNYYLYVFALIFSAALYFAFVTLQYDPAINEVKASIKGAAALKAA 60 Query: 61 XXXXXXXXXXXXXYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMLLGI 120 YANTIFIKRRS+EIGLFQLIG+ K KIF++LS EN++LYFGS+++G+ Sbjct: 61 SILLVAVVAVFVLYANTIFIKRRSKEIGLFQLIGMRKQKIFRILSLENVMLYFGSLVIGV 120 Query: 121 GAGFAVSRLILMILFKILAIESVAKLRFSMEALQQTVIVFAGIYLLIMLMNYTFIKAQSI 180 AGF++S+L+LMILFKI+ +++ AKL FS+EAL QTVIVF GIYLL+M+MNY FIK QSI Sbjct: 121 FAGFSISKLVLMILFKIVDVQAEAKLNFSVEALVQTVIVFCGIYLLVMVMNYAFIKKQSI 180 Query: 181 LSLFKVSSTAQERIRKMPLWEIVLGLLGIGCIASGYYLSTLLFSGKLDDMTRLMTSMIVI 240 LSLFKV+S +++++++ ++++++GLLGI I SGYY+ST LFSGK + L +M I Sbjct: 181 LSLFKVTSATEDKVKRISVFQMIIGLLGILFILSGYYVSTELFSGKFKTVDELFYAMSFI 240 Query: 241 LGLVIIGTYLFYKGTVSFVFNAIRKSKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVS 300 LG VIIGTYLFYKG+VSFV N IRKSK GYL I EVLSLSSIMFRMKSNALLLTIITTVS Sbjct: 241 LGTVIIGTYLFYKGSVSFVSNIIRKSKGGYLNIYEVLSLSSIMFRMKSNALLLTIITTVS 300 Query: 301 ALAIGLLSLSYIAYYSAGATAKDNSPDDFGFAQVEAKERFVQALDKAHIKYSEVHMQPIP 360 ALAIGLLSLSYI+YYSA TA+ N DF + +RF Q LD+ +I YS+ + I Sbjct: 301 ALAIGLLSLSYISYYSAEKTAEQNVAADFAMTNQKDAKRFEQLLDENNISYSKKEIHVIQ 360 Query: 361 MEVDGSQIMEQGSRNTV-----ISTLVVSDSSVEGVDLKPGEARIMGYYNNVLSSYMTLK 415 + QI++ N + VVSD+ + G+D+ G+ G Y ++L +M LK Sbjct: 361 AVFNLEQIVDGDPENMAGDPGKLPLAVVSDAEIAGMDVPKGDVIFSG-YTDLLQKFMALK 419 Query: 416 ESGGVGFKTMNGTIEQQLTGISGKTIMPY-FYSKGAGVFVVDETVYEELAQGQDPKLRSA 474 E+G V K+ + TI G+ ++++ + F S G V VVD+ +++ L+Q +DPKL+ Sbjct: 420 ETGAVKVKSRHETIPLNYLGLKKESLLSFNFTSGGLPVAVVDDALFKRLSQDKDPKLQQK 479 Query: 475 KGAAAADYFGIELADRSQLKDANQIFTDQKPGEMSISQYEYKMNHRSGMGLIMFIVGFLG 534 ++GI L QL+ AN++F + +S + +S GL MFIVGFLG Sbjct: 480 PSL----FYGINLKHEDQLQQANELFATVNQNDQHLSLLDASTAQKSLFGLAMFIVGFLG 535 Query: 535 LTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGIPLVVGLS 594 LTFLITSGCILYFKQMDE E+EK YTILRKLGFT+ DLL+GI+ KQ++NFGIPLV+GLS Sbjct: 536 LTFLITSGCILYFKQMDESEDEKPNYTILRKLGFTRNDLLKGIRIKQIYNFGIPLVIGLS 595 Query: 595 HSYFAVKSGWFFFGTEMLTPMIMVMLLYTVLYSVFGFLSVLYYKRVISESL 645 HSYFAV+SGWF FG E+ TPMI+VM+LYTVLYS+FG LSVLY K+VI +L Sbjct: 596 HSYFAVQSGWFLFGAELWTPMIIVMVLYTVLYSIFGLLSVLYGKKVIKSAL 646 >O34741.1 BCEB_BACSU Bacitracin export permease protein bceB Length = 646 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/652 (53%), Positives = 470/652 (72%), Gaps = 13/652 (1%) Query: 1 MSINYIILLNLRKNIKNYYLYVFALVFGVALYFSFVTLKYDPSLDIVAGSIKXXXXXXXX 60 M+IN +IL NL+KN++NYYLYVFAL+F VALYF+FVTL+YDP+++ V SIK Sbjct: 1 MNINQLILRNLKKNLRNYYLYVFALIFSVALYFAFVTLQYDPAINEVKASIKGAAAIKTA 60 Query: 61 XXXXXXXXXXXXXYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMLLGI 120 YANTIFIKRRS+EIGLFQLIG+TK KIF++LSAEN++LYFGS+ +G+ Sbjct: 61 SILLVAVVAIFILYANTIFIKRRSKEIGLFQLIGMTKHKIFRILSAENVMLYFGSLAIGV 120 Query: 121 GAGFAVSRLILMILFKILAIESVAKLRFSMEALQQTVIVFAGIYLLIMLMNYTFIKAQSI 180 AGF++S+L+LMILFKI+ +++ AKL FS +AL QTVIVF GIYLLIM+MNYTFIK QSI Sbjct: 121 AAGFSISKLVLMILFKIVDVKADAKLHFSEQALVQTVIVFCGIYLLIMIMNYTFIKKQSI 180 Query: 181 LSLFKVSSTAQERIRKMPLWEIVLGLLGIGCIASGYYLSTLLFSGKLDDMTRLMTSMIVI 240 LSLFKV+S+ +++++K+ +++++G LGI I +GYY+S+ LF GK + L +M I Sbjct: 181 LSLFKVTSSTEDKVKKISFFQMLIGALGIVLILTGYYVSSELFGGKFKTINELFVAMSFI 240 Query: 241 LGLVIIGTYLFYKGTVSFVFNAIRKSKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVS 300 LG VIIGT+LFYKG+V+F+ N IRKSK GYL I+EVLSLSSIMFRMKSNALLLTIITTVS Sbjct: 241 LGSVIIGTFLFYKGSVTFISNIIRKSKGGYLNISEVLSLSSIMFRMKSNALLLTIITTVS 300 Query: 301 ALAIGLLSLSYIAYYSAGATAKDNSPDDFGFAQVEAKERFVQALDKAHIKYSEVHMQPIP 360 ALAIGLLSL+YI+YYS+ TA+ N DF F + + F L +++I + + + Sbjct: 301 ALAIGLLSLAYISYYSSEKTAEQNVAADFSFMNEKDAKLFENKLRESNISFVKKATPVLQ 360 Query: 361 MEVDGSQIME------QGSRNTVISTLVVSDSSVEGVDLKPGEARIMGYYNNVLSSYMTL 414 VD + IM+ QG + VVSD V+GVD+ GEA G Y ++L M Sbjct: 361 ANVDIANIMDGTPKEMQGDPGN-MQLAVVSDKDVKGVDVAAGEAVFSG-YTDLLQKIMVF 418 Query: 415 KESGGVGFKTMNGTIEQQLTGISGKTIMPY-FYSKGAGVFVVDETVYEELAQGQDPKLRS 473 K+SG + K+ + T + G+ + ++ Y F S G +VD++++++L + +DP+++ Sbjct: 419 KDSGVIKVKSKHETQPLKYKGLREEFLVSYTFTSGGMPAVIVDDSLFKQLDKDKDPRIQL 478 Query: 474 AKGAAAADYFGIELADRSQLKDANQIFTDQKPGEMSISQYEYKMNHRSGMGLIMFIVGFL 533 A+ + + G+ + Q++ AN++F +S+ + +S G++MFIVGFL Sbjct: 479 AQ----STFIGVNVKHDDQMEKANELFQQVNKKNEHLSRLDTSAAQKSLFGMVMFIVGFL 534 Query: 534 GLTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGIPLVVGL 593 GLTFLITSGCILYFKQM E E+EK YTILRKLGFTQGDL++GI+ KQ++NFGIPLVVGL Sbjct: 535 GLTFLITSGCILYFKQMGESEDEKPSYTILRKLGFTQGDLIKGIRIKQMYNFGIPLVVGL 594 Query: 594 SHSYFAVKSGWFFFGTEMLTPMIMVMLLYTVLYSVFGFLSVLYYKRVISESL 645 HSYFAV+SGWF FG+E+ PMIMVM+LYT LYS+FGFLSVLYYK+VI SL Sbjct: 595 FHSYFAVQSGWFLFGSEVWAPMIMVMVLYTALYSIFGFLSVLYYKKVIKSSL 646 >Q9K618.1 BCEB_BACHD Bacitracin export permease protein bceB Length = 648 Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/656 (52%), Positives = 459/656 (69%), Gaps = 19/656 (2%) Query: 1 MSINYIILLNLRKNIKNYYLYVFALVFGVALYFSFVTLKYDPSLDIVAGSIKXXXXXXXX 60 M+IN++IL NL+KN+KNYYLYVFAL+F VALYF+FVTL+YDP++D V IK Sbjct: 1 MTINHLILQNLKKNLKNYYLYVFALMFSVALYFAFVTLQYDPAMDDVQEGIKGAAAMKTA 60 Query: 61 XXXXXXXXXXXXXYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMLLGI 120 YAN IFIKRRS+EIGLFQ+IG+TKGK+F++LSAENLILYFGS+ G+ Sbjct: 61 SVLLVVIVTTFLLYANNIFIKRRSKEIGLFQMIGMTKGKVFRILSAENLILYFGSLAGGV 120 Query: 121 GAGFAVSRLILMILFKILAIESVAKLRFSMEALQQTVIVFAGIYLLIMLMNYTFIKAQSI 180 GFA+S+++ MILFK+ ++ +A L FS+ AL QTVIVF IY LI+L NY F+K Q+I Sbjct: 121 FIGFAISKVVTMILFKLTGLDRIATLSFSVPALVQTVIVFTLIYGLILLANYLFVKQQTI 180 Query: 181 LSLFKVSSTAQERIRKMPLWEIVLGLLGIGCIASGYYLSTLLFSGKLDDMTRLMTSMIVI 240 LSLF V+S++++R++K+ L++I++G LGI I GY++S+ LF G M L +MI I Sbjct: 181 LSLFHVTSSSEDRVKKVSLFDIIIGSLGIVSILVGYFVSSKLFGGTFTSMETLFIAMIFI 240 Query: 241 LGLVIIGTYLFYKGTVSFVFNAIRKSKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVS 300 LG VIIGTY FYKG+V+F+FN IRK K G+L + +VLSLSSIMFRMKSNAL+LTIITT+S Sbjct: 241 LGSVIIGTYFFYKGSVTFLFNLIRKKKNGHLAVRDVLSLSSIMFRMKSNALILTIITTIS 300 Query: 301 ALAIGLLSLSYIAYYSAGATAKDNSPDDFGFAQVEAKERFVQALDKAHIKYSEVHMQPIP 360 LAIGLLSLSYI+YYSA TA+ P DF +E F +ALD I Y E + + Sbjct: 301 GLAIGLLSLSYISYYSAEKTAEHYVPSDFTLTDMEDAAYFKEALDAHGIAYDETVIDVLI 360 Query: 361 MEVDGSQIMEQ-----GSRNTVISTLVVSDSSVEGVDLKPGEARIMGYYNNVLSSYMTLK 415 EV I+E+ + ++ V+ D++VE V++ P EA G YN+++ +M+LK Sbjct: 361 AEVYVKDILEEPLDGVNFDSDIMILPVIRDTAVESVNVAPEEAAFTG-YNDMMQQFMSLK 419 Query: 416 ESGGVGFKTMNGTIEQQLTGISGKTIMP-YFYSKGAGVFVVDETVYEELAQGQDPKLRSA 474 +SG + + I Q G+ + ++ YF S G + +V+ET + +L +P+++ Sbjct: 420 DSGSIELRGKQKVIPQNYIGLHSEYLVSTYFSSGGLPLAIVNETTFSQLQDDINPEIQ-- 477 Query: 475 KGAAAADYFGIELADRSQLKDA-----NQIFTDQKPGEMSISQYEYKMNHRSGMGLIMFI 529 ++ + GI++ D QL++A FT + P +Q E + + GL MFI Sbjct: 478 --LDSSVHIGIDIKDARQLQEAVVLFHETPFTSETP---QYAQVEMSQSQKQTFGLAMFI 532 Query: 530 VGFLGLTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGIPL 589 VGFLGLTFLITSGCILYFKQMDE EEEK YTILRKLGFTQGDLL+GI+ KQ+FNFGIPL Sbjct: 533 VGFLGLTFLITSGCILYFKQMDESEEEKGSYTILRKLGFTQGDLLKGIRVKQVFNFGIPL 592 Query: 590 VVGLSHSYFAVKSGWFFFGTEMLTPMIMVMLLYTVLYSVFGFLSVLYYKRVISESL 645 ++GLSHSYFAVKSGWFFFG E+ TPMIMVMLLYT LYS+F LSVLYYK+VI ++L Sbjct: 593 LLGLSHSYFAVKSGWFFFGNELWTPMIMVMLLYTALYSIFAILSVLYYKKVIKDAL 648 >Q2BDG6.1 Q2BDG6_9BACI ABC transporter (Permease) Length = 648 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/653 (54%), Positives = 461/653 (70%), Gaps = 13/653 (1%) Query: 1 MSINYIILLNLRKNIKNYYLYVFALVFGVALYFSFVTLKYDPSLDIVAGSIKXXXXXXXX 60 MS+N +I NL+KN+KNYYLY+FAL+F ALYF+FVTL+YDP++D + GSIK Sbjct: 1 MSVNQLIWKNLKKNVKNYYLYIFALIFSAALYFAFVTLQYDPAMDEIEGSIKGGAGMKAA 60 Query: 61 XXXXXXXXXXXXXYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMLLGI 120 YAN++F KRRSREIGLFQLIG+TK +IF++L+AEN +LY+GS+L+G+ Sbjct: 61 SVLLVAIVAVFLVYANSLFTKRRSREIGLFQLIGMTKSRIFRILTAENFMLYYGSLLIGM 120 Query: 121 GAGFAVSRLILMILFKILAIESVAKLRFSMEALQQTVIVFAGIYLLIMLMNYTFIKAQSI 180 AGF VS+L++MILFKI ++ VA+L FS +AL QT+IVF IYLLIML+NY FIK QSI Sbjct: 121 MAGFLVSKLMMMILFKITGVDEVAELYFSNKALVQTLIVFTAIYLLIMLVNYLFIKGQSI 180 Query: 181 LSLFKVSSTAQERIRKMPLWEIVLGLLGIGCIASGYYLSTLLFSGKLDDMTRLMTSMIVI 240 LSLF+V S+A+E+IRKM ++ I++G+LGI IA+GYY+S +LF G M L +MI I Sbjct: 181 LSLFRVQSSAEEKIRKMSIFNIIIGILGIILIAAGYYVSGILFEGDFTSMPELFGAMIFI 240 Query: 241 LGLVIIGTYLFYKGTVSFVFNAIRKSKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVS 300 LG VI+GTY FYKG+VSF+ IRK K GYL + EVLSLSSIMFRMKSNALLLTIITTVS Sbjct: 241 LGAVILGTYFFYKGSVSFIIYLIRKKKDGYLNVKEVLSLSSIMFRMKSNALLLTIITTVS 300 Query: 301 ALAIGLLSLSYIAYYSAGATAKDNSPDDFGFAQVEAKERFVQALDKAHIKYSEVHMQPIP 360 ALAIGLLSLSYI+YYSA A+DN P+DF F ++ RF Q LD +I Y E ++ + Sbjct: 301 ALAIGLLSLSYISYYSAEKMARDNVPNDFSFTVEDSAVRFRQELDSKNIDYREKRIEVVT 360 Query: 361 MEVD-----GSQIMEQGSRNTVISTLVVSDSSVEGVDLKPGEARIMGYYNNVLSSYMTLK 415 +D G ++ E + V+S+SS DL EA G Y++VL +M LK Sbjct: 361 ASIDVKDIQGKKLEEMNFDTDKMDLPVISESSAGRKDLDENEAIFTG-YSDVLQRFMPLK 419 Query: 416 ESGGVGFKTMNGTIEQQLTGISGKTIMPYFYSKGA-GVFVVDETVYEELAQGQDPKLRSA 474 +SG V T I G+ ++P +Y++G +VD+ V+E+L DP L++ Sbjct: 420 DSGKVKLHTKEKEIPLNYIGLEKDYLIPLYYTRGGLQTAIVDDAVFEQLKAEMDPGLQAE 479 Query: 475 KGAAAADYFGIELADRSQLKDANQIFTDQKPGEM--SISQYEYKMNHRSGMGLIMFIVGF 532 Y GI++ D +L DAN+ F + GE + SQ + ++ +S MGLIMFIVGF Sbjct: 480 NNV----YIGIDIKDPERLNDANEAFHALQLGESGENDSQLDVMISQKSNMGLIMFIVGF 535 Query: 533 LGLTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGIPLVVG 592 LGL+FL+TSGCILYFKQM E E+EK +TILRKLGFT GDL++G+Q KQLF+FGIPL +G Sbjct: 536 LGLSFLVTSGCILYFKQMGESEDEKPNFTILRKLGFTTGDLMKGLQAKQLFSFGIPLAIG 595 Query: 593 LSHSYFAVKSGWFFFGTEMLTPMIMVMLLYTVLYSVFGFLSVLYYKRVISESL 645 L HSYFAV+SGWF FG E+ TPMI VM+LYT+LYS+FG LSVLY K+V+ ++L Sbjct: 596 LVHSYFAVQSGWFMFGAEVWTPMISVMILYTILYSIFGILSVLYSKKVVKDAL 648 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.141 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,282,222,250 Number of extensions: 130088326 Number of successful extensions: 503244 Number of sequences better than 1.0e-05: 1385 Number of HSP's gapped: 500192 Number of HSP's successfully gapped: 1756 Length of query: 645 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 503 Effective length of database: 1,722,912,073 Effective search space: 866624772719 Effective search space used: 866624772719 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 135 (56.6 bits)