BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0566.0027.p (386 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9K9F9.1 Q9K9F9_BACHD Alpha-D-mannose-alpha(1-6)phosphatidyl myo... 396 e-108 Q65FW0.1 Q65FW0_BACLD Putative uncharacterized protein 375 e-102 C3AS15.1 C3AS15_BACMY Glycosyl transferase, group 1 360 2e-97 C3B9C1.1 C3B9C1_BACMY Glycosyl transferase, group 1 359 2e-97 C3BRE0.1 C3BRE0_9BACI Glycosyl transferase, group 1 359 3e-97 >Q9K9F9.1 Q9K9F9_BACHD Alpha-D-mannose-alpha(1-6)phosphatidyl myo-inositol monomannoside transferase Length = 381 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 187/377 (49%), Positives = 257/377 (68%), Gaps = 10/377 (2%) Query: 1 MRLALFTDTFLPQTNGVARTLGQLTSHLNRRGIEHLLFTPKSAPE-DSYPDPVRPVASIP 59 MR+ALFTDT++PQ NGVART+ +L HL +R +E+ L+ P++ + D + + AS+P Sbjct: 1 MRIALFTDTYIPQVNGVARTMKRLVDHLEKRQVEYALYMPETIEKLDRFESNIHTFASLP 60 Query: 60 FFLYPECRLALPSMSSIQSQLNTFQPDLLHMANPFNIGLCGLRYAHRQGLPHVASYHTHF 119 FFLYPECR+ALP++ ++ QL +FQPDLLH+A PFN+GL GL++ + G+P V SYHTHF Sbjct: 61 FFLYPECRIALPNVFKLRQQLTSFQPDLLHIATPFNVGLSGLQHGKKYGIPMVGSYHTHF 120 Query: 120 DRYLEYYRMRRIVPLYWRYMKWFHRSCGATFAPSRETAEILREQGFERLRLWSRGIDCRQ 179 D YL YY+++ + W+Y+KWFH+ TF PS ET L++ GF+RL LW+RG+DC + Sbjct: 121 DHYLHYYKLQFMSAWLWKYVKWFHQPFERTFVPSVETMRHLQKHGFQRLALWTRGVDCER 180 Query: 180 YSPDKRQAASVRERYGI----ADPLILLYVGRIAPEKDIATLLHALQQLPESVAAGVHLL 235 + P +R + Y I D +LLYVGR+APEKD+ATL+ + LP + + + Sbjct: 181 FHPKQRHRS-----YAINLLPKDKAVLLYVGRLAPEKDLATLVAIMSLLPRELNEKIQWM 235 Query: 236 VVGDGPLLPELRAQAPRNVTFTGARHGEELAELYASADLFVFPSSTETFGNVVLEAMASG 295 +VGDGP LPE++ Q P NVTFTG GEELA YASADLFVFPS+TETFGNVVLEA ASG Sbjct: 236 IVGDGPSLPEMKKQCPSNVTFTGYLKGEELAAAYASADLFVFPSATETFGNVVLEAFASG 295 Query: 296 LPVVAAGAGGSKELVMPGVTGVLFQPHDPGSLAEEICRLASDSMLRTAMGSEGRRQALGR 355 P + A GG E+V G +G++ + D + + I L + R MG E R+ AL + Sbjct: 296 TPAIVADRGGVTEIVEHGKSGMICKAGDAHTFIQAIEHLLMNRSKRAEMGYEARQYALTQ 355 Query: 356 SWEQIFDGLIRDYEEII 372 SWE+IFD L+ YE++I Sbjct: 356 SWERIFDDLLEQYEQVI 372 >Q65FW0.1 Q65FW0_BACLD Putative uncharacterized protein Length = 378 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/372 (47%), Positives = 239/372 (64%), Gaps = 3/372 (0%) Query: 1 MRLALFTDTFLPQTNGVARTLGQLTSHLNRRGIEHLLFTPKSAPEDSYPDPVRPVASIPF 60 M++A+FTDTF P NG ARTL + T +L + G+ + +F P+S E + +R S+PF Sbjct: 1 MKIAIFTDTFTPDVNGCARTLKRYTDYLEKNGMPYKVFAPESTHETQFSSRIRRFTSMPF 60 Query: 61 FLYPECRLALPSMSSIQSQLNTFQPDLLHMANPFNIGLCGLRYAHRQGLPHVASYHTHFD 120 FLYPECR+ALP++ ++S+L F PDL+H+A PFNIGL GL+ A + +P V SYHT FD Sbjct: 61 FLYPECRIALPNLIKMKSELREFHPDLIHIATPFNIGLAGLKLAKKWNIPVVGSYHTDFD 120 Query: 121 RYLEYYRMRRIVPLYWRYMKWFHRSCGATFAPSRETAEILREQGFERLRLWSRGIDCRQY 180 +YL YY ++ L W+YM WFH+ F PSRET L+ + F L +W RG+DC Q+ Sbjct: 121 QYLSYYDLQMFSKLLWKYMLWFHKDFRKVFVPSRETFMQLKAKQFRNLSIWKRGVDCSQF 180 Query: 181 SPDKRQAASVRERYGIADPLILLYVGRIAPEKDIATLLHALQQLPESVAAGVHLLVVGDG 240 SP Q +R RYGI + IL YVGR+APEKD+ TLL ++ VH L+ GDG Sbjct: 181 SP-AHQTEHIRRRYGIKETYILSYVGRLAPEKDLETLLKIASH--PALKDDVHWLIAGDG 237 Query: 241 PLLPELRAQAPRNVTFTGARHGEELAELYASADLFVFPSSTETFGNVVLEAMASGLPVVA 300 PL EL +AP N+TF G GEELA +YAS+DLFVFPS TETFGN LEA+A G PV+ Sbjct: 238 PLKKELEKRAPLNMTFAGYVKGEELASIYASSDLFVFPSPTETFGNSALEALACGTPVIG 297 Query: 301 AGAGGSKELVMPGVTGVLFQPHDPGSLAEEICRLASDSMLRTAMGSEGRRQALGRSWEQI 360 A +GG K+ + G G L +P +P + I R+ S+ L+ M E R AL +SW+ I Sbjct: 298 ADSGGLKDFIQNGRNGFLSEPRNPEAFTANILRVLSNPSLKKRMAYEARSYALTQSWDVI 357 Query: 361 FDGLIRDYEEII 372 FD L+ + E ++ Sbjct: 358 FDNLLSECESVL 369 >C3AS15.1 C3AS15_BACMY Glycosyl transferase, group 1 Length = 380 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 173/373 (46%), Positives = 232/373 (62%), Gaps = 3/373 (0%) Query: 1 MRLALFTDTFLPQTNGVARTLGQLTSHLNRRGIEHLLFTPKSAPEDSYPDPVRPVASIPF 60 MR+A+FTDTF PQ NGVA+TL +LT + ++ I + +F P+ ED + V + SIP Sbjct: 1 MRVAIFTDTFTPQVNGVAKTLDRLTLYFQKQNIAYSVFAPQHTAEDDFVANVNKMRSIPL 60 Query: 61 -FLYPECRLALPSMSSIQSQLNTFQPDLLHMANPFNIGLCGLRYAHRQGLPHVASYHTHF 119 LYPECR A P+ I+ +L FQPD++H+A PFN+GLCG+ YA + +P V SYHT F Sbjct: 61 KILYPECRFAFPT-PRIKRELLNFQPDIIHVATPFNMGLCGMNYAKKLNIPLVGSYHTDF 119 Query: 120 DRYLEYYRMRRIVPLYWRYMKWFHRSCGATFAPSRETAEILREQGFERLRLWSRGIDCRQ 179 D YL+YY++ + W Y+KWFH S F PS ET + L ++GF L +W RG+DC Sbjct: 120 DSYLQYYKIEFFSNMLWNYLKWFHSSMQKNFVPSPETLQQLTQKGFRNLYIWGRGVDCSL 179 Query: 180 YSPDKRQAASVRERYGIADPLILLYVGRIAPEKDIATLLHALQQLPESVAAGVHLLVVGD 239 + + R++Y I P IL Y+GRIAPEKDI TL + + +H L+ GD Sbjct: 180 FHQAYNKDL-FRKKYNITAPYILSYIGRIAPEKDIETLRTLIHTTIKERKDNIHWLIAGD 238 Query: 240 GPLLPELRAQAPRNVTFTGARHGEELAELYASADLFVFPSSTETFGNVVLEAMASGLPVV 299 GPL ELR P NVTFTG E LAE YA +DL VFPS+TETFGNVVLE++A G PVV Sbjct: 239 GPLAEELRETLPANVTFTGYLQEENLAEAYACSDLMVFPSATETFGNVVLESLACGTPVV 298 Query: 300 AAGAGGSKELVMPGVTGVLFQPHDPGSLAEEICRLASDSMLRTAMGSEGRRQALGRSWEQ 359 A +GG K ++ G TG L +P + S I +L ++ +R MG R A +SW++ Sbjct: 299 GANSGGVKNIITDGKTGFLCEPKNSNSFLSSIYQLLNNEEMRKQMGIAARFYATTQSWDE 358 Query: 360 IFDGLIRDYEEII 372 IF GL YEE++ Sbjct: 359 IFHGLYMQYEEVL 371 >C3B9C1.1 C3B9C1_BACMY Glycosyl transferase, group 1 Length = 380 Score = 359 bits (922), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 173/373 (46%), Positives = 232/373 (62%), Gaps = 3/373 (0%) Query: 1 MRLALFTDTFLPQTNGVARTLGQLTSHLNRRGIEHLLFTPKSAPEDSYPDPVRPVASIPF 60 MR+A+FTDTF PQ NGVA+TL +LT + ++ I + +F P+ ED + V + SIP Sbjct: 1 MRVAIFTDTFTPQVNGVAKTLDRLTLYFQKQNIAYSVFAPQHTAEDDFVANVNKMRSIPL 60 Query: 61 -FLYPECRLALPSMSSIQSQLNTFQPDLLHMANPFNIGLCGLRYAHRQGLPHVASYHTHF 119 LYPECR A P+ I+ +L FQPD++H+A PFN+GLCG+ YA + +P V SYHT F Sbjct: 61 KILYPECRFAFPT-PRIKRELLNFQPDIIHVATPFNMGLCGMYYAKKLNIPLVGSYHTDF 119 Query: 120 DRYLEYYRMRRIVPLYWRYMKWFHRSCGATFAPSRETAEILREQGFERLRLWSRGIDCRQ 179 D YL+YY++ + W Y+KWFH S F PS ET + L ++GF L +W RG+DC Sbjct: 120 DSYLQYYKIEFFSNMLWNYLKWFHSSMQKNFVPSPETLQQLTQKGFRNLYIWGRGVDCSL 179 Query: 180 YSPDKRQAASVRERYGIADPLILLYVGRIAPEKDIATLLHALQQLPESVAAGVHLLVVGD 239 + + R++Y I P IL Y+GRIAPEKDI TL + + +H L+ GD Sbjct: 180 FHQAYNKDL-FRKKYNITAPYILSYIGRIAPEKDIETLRTLIHTTIKERKDNIHWLIAGD 238 Query: 240 GPLLPELRAQAPRNVTFTGARHGEELAELYASADLFVFPSSTETFGNVVLEAMASGLPVV 299 GPL ELR P NVTFTG E LAE YA +DL VFPS+TETFGNVVLE++A G PVV Sbjct: 239 GPLAEELRETLPANVTFTGYLQEENLAEAYACSDLMVFPSATETFGNVVLESLACGTPVV 298 Query: 300 AAGAGGSKELVMPGVTGVLFQPHDPGSLAEEICRLASDSMLRTAMGSEGRRQALGRSWEQ 359 A +GG K ++ G TG L +P + S I +L ++ +R MG R A +SW++ Sbjct: 299 GANSGGVKNIITDGKTGFLCEPKNSNSFLSSIYQLLNNEEMRKQMGIAARFYATTQSWDE 358 Query: 360 IFDGLIRDYEEII 372 IF GL YEE++ Sbjct: 359 IFHGLYMQYEEVL 371 >C3BRE0.1 C3BRE0_9BACI Glycosyl transferase, group 1 Length = 380 Score = 359 bits (921), Expect = 3e-97, Method: Compositional matrix adjust. Identities = 173/373 (46%), Positives = 231/373 (61%), Gaps = 3/373 (0%) Query: 1 MRLALFTDTFLPQTNGVARTLGQLTSHLNRRGIEHLLFTPKSAPEDSYPDPVRPVASIPF 60 MR+A+FTDTF PQ NGVA TL +LT + ++ I + +F P+ ED + V + SIP Sbjct: 1 MRVAIFTDTFTPQVNGVANTLDRLTLYFQKQNIAYSVFAPQHTAEDDFVANVNKMRSIPL 60 Query: 61 -FLYPECRLALPSMSSIQSQLNTFQPDLLHMANPFNIGLCGLRYAHRQGLPHVASYHTHF 119 LYPECR A P+ I+ +L FQPD++H+A PFN+GLCG+ YA + +P V SYHT F Sbjct: 61 KILYPECRFAFPT-PRIKRELLNFQPDIIHVATPFNMGLCGMYYAKKLNIPLVGSYHTDF 119 Query: 120 DRYLEYYRMRRIVPLYWRYMKWFHRSCGATFAPSRETAEILREQGFERLRLWSRGIDCRQ 179 D YL+YY++ + W Y+KWFH S F PS ET + L ++GF L +W RG+DC Sbjct: 120 DSYLQYYKIEFFSNMLWNYLKWFHSSMQKNFVPSPETLQQLTQKGFRNLYIWGRGVDCSL 179 Query: 180 YSPDKRQAASVRERYGIADPLILLYVGRIAPEKDIATLLHALQQLPESVAAGVHLLVVGD 239 + + R++Y I P IL Y+GRIAPEKDI TL + + +H L+ GD Sbjct: 180 FHQSYNKDL-FRKKYNITAPYILSYIGRIAPEKDIETLRTLIHTTIKERKDNIHWLIAGD 238 Query: 240 GPLLPELRAQAPRNVTFTGARHGEELAELYASADLFVFPSSTETFGNVVLEAMASGLPVV 299 GPL ELR P NVTFTG E LAE YA +DL VFPS+TETFGNVVLE++A G PVV Sbjct: 239 GPLAEELRETLPANVTFTGYLQEENLAEAYACSDLMVFPSATETFGNVVLESLACGTPVV 298 Query: 300 AAGAGGSKELVMPGVTGVLFQPHDPGSLAEEICRLASDSMLRTAMGSEGRRQALGRSWEQ 359 A +GG K ++ G TG L +P + S I +L ++ +R MG R A +SW++ Sbjct: 299 GANSGGVKNIITDGKTGFLCEPKNSNSFLSSIYQLLNNEEMRKQMGIAARFYATTQSWDE 358 Query: 360 IFDGLIRDYEEII 372 IF GL YEE++ Sbjct: 359 IFHGLYMQYEEVL 371 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,393,340,567 Number of extensions: 102878399 Number of successful extensions: 278099 Number of sequences better than 1.0e-05: 7013 Number of HSP's gapped: 272877 Number of HSP's successfully gapped: 7070 Length of query: 386 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 249 Effective length of database: 1,770,017,148 Effective search space: 440734269852 Effective search space used: 440734269852 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 132 (55.5 bits)