BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0566.0020.p (326 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D7B1.1 B1D7B1_9BACL Putative uncharacterized protein 209 2e-52 Q8CUH6.1 Q8CUH6_OCEIH Putative uncharacterized protein OB1131 197 1e-48 B8D0Q6.1 B8D0Q6_HALOH Putative uncharacterized protein 94 2e-17 A7VPQ7.1 A7VPQ7_9CLOT Putative uncharacterized protein 80 2e-13 B7CAU9.1 B7CAU9_9FIRM Putative uncharacterized protein 79 9e-13 >B1D7B1.1 B1D7B1_9BACL Putative uncharacterized protein Length = 324 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 113/332 (34%), Positives = 179/332 (53%), Gaps = 19/332 (5%) Query: 1 MPNIWMHLEYGQQLADEFSRDFPFLAERKNRPELYHLGCQGPDFLLYHSFLPWKKDTRAI 60 MPN+W HL +GQ++ D+ LA + L+++GCQGPDFL YH FLPW+ + I Sbjct: 1 MPNVWAHLIFGQKVLDQLQESG--LAASEPLCRLFYMGCQGPDFLFYHRFLPWQGKSPMI 58 Query: 61 RLGDLMHTENCGPVLVDFWQRALALPFHELKDAQQ------YFLGFLTHHLLDRNLHPYI 114 +LG MH +CGPVL+ L DA Q Y LGF+ HH+LDR++HP + Sbjct: 59 QLGTEMHNRDCGPVLMKLLDSILG----RSADAAQPDPAVVYSLGFVLHHVLDRHMHPLV 114 Query: 115 NWKAGYKHRNHQRFEIVLDTLFMKRRKQLDTWRHAAWKKINVGSRLPFPIHTILRETASD 174 ++G++ +HQR+E+++DT+ +++ ++TW+ W+KI++G RLP + + Sbjct: 115 FSRSGFRKWDHQRYEVMMDTIIARQQWGIETWKTPVWRKIDIGGRLPEAVVKAFQAITGS 174 Query: 175 WYPE-SRRLPSEIWHEAYLDMILAHKWLFDPKGWKKSLLRGKARRLFSQQLSPAEEKLDY 233 +YPE + + E W+ A DMI A + DP K+S+ G+ ++ P D Sbjct: 175 YYPELAPVVLQEDWNTAIRDMIRAQRLFHDPTSIKRSVTFGQMEPFVFRKQVP----YDV 230 Query: 234 LNEKHGEWRHSALYSEVRTESVWDLWEEALAEGRTVLRALASWLNSTVPAEAARALEHFK 293 LNE W + + +R E+ W LW+ A+ + + V+ A+ +L R + Sbjct: 231 LNEAGTPWIDPSDKTVIRNETAWILWDRAMEDAQLVIPAVLQYLRQGSRRPELRQIA--A 288 Query: 294 QVLGDRSYDTGKECSSKLKNLYAEPIWEAGII 325 + +G+ SY+TG C S YAEPIW G I Sbjct: 289 ERIGNLSYETGLPCDSGAIIRYAEPIWPDGGI 320 >Q8CUH6.1 Q8CUH6_OCEIH Putative uncharacterized protein OB1131 Length = 300 Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 115/319 (36%), Positives = 173/319 (54%), Gaps = 20/319 (6%) Query: 1 MPNIWMHLEYGQQLADEFSRDFPFLAERKNRPELYHLGCQGPDFLLYHSFLPWKKDTRAI 60 MPNIW H+ + + + N P L +LG QGPD Y+ F PW KD + Sbjct: 1 MPNIWTHILFAEDACNSVDLSL------YNGPAL-NLGAQGPDPFFYYQFWPWIKDNQVE 53 Query: 61 RLGDLMHTENCGPVLVDFWQRALALPFHELKDAQQYFLGFLTHHLLDRNLHPYINWKAGY 120 ++G ++HT+ CG L++ +A F Q Y LGF+THH+LDR+ HPYI++ AGY Sbjct: 54 QIGTILHTKRCGEFLLELISKAKNCNF----QVQSYVLGFITHHILDRHTHPYIHYHAGY 109 Query: 121 KHRNHQRFEIVLDTLFMKRRKQLDTWRHAAWKKINVGSRLPFPIHTILRETASDWYPESR 180 + HQ+ E+++DT+ M + ++ + W+ +++I VG +P H IL ++ YPE Sbjct: 110 EGSKHQKLEVIIDTIMMLKLRKKEAWKFPVYQEIYVGKSIPSDSHHILHQSIHKIYPELS 169 Query: 181 RLPSEIWHEAYLDMILAHKWLFDPKGWKKSLLRGKARRLFSQQLSPAEEKLDYLNEKHGE 240 P ++Y DMI+AH+ L DP W+ LL G +S Q P + +DYLNE+H Sbjct: 170 P-PEAYIKKSYHDMIMAHRILADPNLWRNKLL-GNFISSYSHQ--PIQTNIDYLNEEHRT 225 Query: 241 WRHSALYSEVRTESVWDLWEEALAEGRTVLRALASWLNSTVPAEAARALEHFKQVLGDRS 300 W H A + T S D +E+A E T+L + + NS E + L H ++G+ S Sbjct: 226 WHHPAT-NVPSTRSFLDHYEDASKEICTLLPLIHHYWNSHKCNE--KNLIH--DIIGNIS 280 Query: 301 YDTGKECSSKLKNLYAEPI 319 YDTG +LKN Y+ PI Sbjct: 281 YDTGMPLIRELKNTYSNPI 299 >B8D0Q6.1 B8D0Q6_HALOH Putative uncharacterized protein Length = 289 Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 82/296 (27%), Positives = 126/296 (42%), Gaps = 23/296 (7%) Query: 1 MPNIWMHLEYGQQLADEFSRDFPFLAERKNRPELYHLGCQGPDFLLYHSFLPWKKDTRAI 60 MP+ W H+ G+++ D+ D F K+ ++++LGCQGPDF YH F PW K+ + Sbjct: 1 MPDFWTHILAGERVIDKLE-DKKFQEIIKDNIKVFNLGCQGPDFFFYHQFWPWIKNKKGP 59 Query: 61 RLGDLMHTENCGPVL---VDFWQRALALPFHELKDAQQYFLGFLTHHLLDRNLHPYINWK 117 G +H + L VD+ + L + Y G +TH LD+ LHP IN + Sbjct: 60 ATGADLHLKKVDQFLITGVDYLKDLSCKADFPLLGS--YLAGLITHLSLDKWLHPLINSR 117 Query: 118 AGYKHRNHQRFEIVLDTLFMKRRKQLDTWRHAAWKKINVGSRLPFPI----HTILRETAS 173 H+ FEI LDT M R K R + + I VG LP I H IL++ Sbjct: 118 TS-NSLEHKWFEIQLDTYLMARLKGQRADRLYSREAIEVGPNLPGEIEAFYHYILKKVYG 176 Query: 174 DWYPESRRLPSEIWHEAYLDMILAHKWLFDPKGWKKSLLRGKARRLFSQQLSPAEEKLDY 233 Y + + + AY DM + + P+ KK LL+ L P LD Sbjct: 177 --YRMADEDLAGFINGAYRDMKRVQRIFYSPRYLKKMLLK------VLNWLLP----LDI 224 Query: 234 LNEKHGEWRHSALYSEVRTESVWDLWEEALAEGRTVLRALASWLNSTVPAEAARAL 289 + E S E V +E+ + E + + ++N + E ++ Sbjct: 225 TIYSYPEKVQSGFLENEEKEEVMTGFEKGVDEAAEFIDVVCQYINGRLNQEEVKSF 280 >A7VPQ7.1 A7VPQ7_9CLOT Putative uncharacterized protein Length = 294 Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 72/263 (27%), Positives = 108/263 (41%), Gaps = 40/263 (15%) Query: 38 GCQGPDFLLYHSFLPWKKDTRAIRLGDLMHTENCGPVLVDFWQRALALPFHELKDAQQ-- 95 G QGPDF H F PW+K +G+ +H + DF Q E ++ ++ Sbjct: 34 GAQGPDFFFTHRFFPWQKGESLKEIGERLHQTPPSSIF-DFAQ--------EYENGERGN 84 Query: 96 -----YFLGFLTHHLLDRNLHPYINWKAGYKHR---------NHQRFEIVLDTLFMK-RR 140 Y LGFL H+ LD HP++N+ A H H E LD + ++ R Sbjct: 85 DVSLSYVLGFLCHYALDSTAHPFVNYSAEMLHELVKPSTVETCHHEVESNLDVVLLRYER 144 Query: 141 KQLDT---WRHAAWKKINVGSRLPFPIHTILRETASDWYPESRRLPSEIWHEAYLDMILA 197 +L T + A + V + ++LR ++ E +A D A Sbjct: 145 AELPTDFSLKRAVPRDEGVKQEMASFYQSLLRRLYGT------QVSQEAVAQAVEDCRTA 198 Query: 198 HKWLFDPKGWKKSLL----RGKARRLFSQQLSPAEEK-LDYLNEKHGEWRHSALYSEVRT 252 W+ D KK +L +GK L S EE DY N H EW+ E+RT Sbjct: 199 FGWMTDRTTLKKKILLRVEKGKLPTLSCHVRSMTEETDFDYSNVLHREWQWPMETGELRT 258 Query: 253 ESVWDLWEEALAEGRTVLRALAS 275 ES DL+E+A+ + ++ S Sbjct: 259 ESYLDLYEQAVELAKALIAGFLS 281 >B7CAU9.1 B7CAU9_9FIRM Putative uncharacterized protein Length = 324 Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 88/340 (25%), Positives = 137/340 (40%), Gaps = 48/340 (14%) Query: 1 MPNIWMHLEYGQQLADEFSRDFPFLAERKNRPELYHLGCQGPDFLLYHSFLPW----KKD 56 MPNI H + Q++ D+ L E R +L +G GPDFL +H P K D Sbjct: 1 MPNIITHTLFAQEIFDKVDEATHDLFEP--RLQLLEIGSNGPDFLFFHGMNPKDFYKKSD 58 Query: 57 TRAIRLGDLMHTENCGPVLVDFWQRALALPFHEL-----KDAQQYFLGFLTHHLLDRNLH 111 R G + H + DF+Q+AL +E KD Y G L H LD H Sbjct: 59 LRVA--GSMFHAAHVN----DFYQKALISIRNEQDEDIKKDMMTYVCGHLCHWALDATSH 112 Query: 112 PYINWKAG-YKHRN---HQRFEIVLDTLFMKRRKQLDTWRHAAWKKINVGSRLPFPIHTI 167 PY+ ++ G K ++ H RFE +LD + +K +++ ++ +V I I Sbjct: 113 PYVFYRTGPCKGKSAWYHHRFESLLDAIMLKVKRECTIEDFKFYEVCDVTKEQARAIARI 172 Query: 168 ----LRETAS-DWYPESRRLPSEIWHEAYLDMILAHKWLFDPKGWKKSLLR-----GKAR 217 +R+ D P WH +D G K L+ KA Sbjct: 173 YVVAIRQILGFDIKPHQILESLNDWH-------FIETLFYDASGDKLKALQTLETFTKAY 225 Query: 218 RLFSQQLSP--AEEKLDYLNEKHGEWRHSALYSEVRTESVWDLWEEALAEGRTVLRA-LA 274 S + P ++ D +N H W H + S V TES +DL++ A +R LA Sbjct: 226 NSLSGYIVPNHPDDPYDVMNLLHTRWHHPSDSSFVSTESFFDLYDRAQLLAMEAIRLFLA 285 Query: 275 SWLNSTVPAEAARALEHFKQVLGDRSYDTGKECSSKLKNL 314 + N + + ++ DR+Y+ G +++ N Sbjct: 286 ACQNPDLDEDLLLLIK-------DRNYNLGVSNQAEMTNF 318 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.137 0.453 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,175,540,956 Number of extensions: 91244083 Number of successful extensions: 180490 Number of sequences better than 1.0e-05: 24 Number of HSP's gapped: 180479 Number of HSP's successfully gapped: 24 Length of query: 326 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 190 Effective length of database: 1,779,438,163 Effective search space: 338093250970 Effective search space used: 338093250970 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 131 (55.1 bits)