BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0566.0009.p
         (179 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C4BY87.1 C4BY87_9FUSO Putative uncharacterized protein                 82   2e-14
B3K5M4.1 B3K5M4_9BACI Putative uncharacterized protein                 81   4e-14
C4BWW2.1 C4BWW2_9FUSO Putative uncharacterized protein                 77   5e-13
A6LX22.1 A6LX22_CLOB8 Putative uncharacterized protein                 66   1e-09

>C4BY87.1 C4BY87_9FUSO Putative uncharacterized protein
          Length = 160

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 9/159 (5%)

Query: 10  IQYLKSVIDDEIWYFEIDGQQTAYRQIVARQEGACRVSGSPD-----FYLTDQSVEWMEG 64
           ++Y+    ++E ++ E+D ++ A RQI+  ++G   +S   D       LTD   E  E 
Sbjct: 1   MEYITFTFENETYWLELDEEKYALRQIILSEDGFAAISCRDDCLAEGMILTD---EIDEN 57

Query: 65  DIPIESAEFEAVWAKAMAPYQEEWNRVRQRYPEGRRVAGAIMFFSIHGIHIALSDGGYAV 124
            +PI++ EFE +W     PY   WN  +++YP G +V G I +F   GI + + D    +
Sbjct: 58  ILPIDNDEFEKIWNIYSFPYLNVWNEEKKKYPVGSQVKGFIKYFYPQGIIMEI-DKIQGI 116

Query: 125 TAYEPVRSQVDHSYLYPRYLIEGTVQGVDDVNCWLVLGN 163
           + Y+  R       LYP + I GTV G D+ N  L++ +
Sbjct: 117 SDYDTCRKNSSPKNLYPGHKILGTVFGYDEKNMRLIISD 155


>B3K5M4.1 B3K5M4_9BACI Putative uncharacterized protein
          Length = 177

 Score = 80.9 bits (198), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 10/171 (5%)

Query: 10  IQYLKSVIDDEI--WYFEIDGQQTAYRQIVARQEGAC----RVSGSPDFYLTDQSVEWME 63
           ++YLK V +  +  WYFE+D   TAYRQ+V  ++G+     R   S  F L +  ++  E
Sbjct: 1   MKYLKDVQEPGMGTWYFEVDHDGTAYRQMVHDEDGSWITSNRKHDSRHFLLAEHPLDPKE 60

Query: 64  GDIP-IESAEFEAVWAKAMAPYQEEWNRVRQRYPEGRRVAGAIMFFSIHG--IHIALSDG 120
                I  A FE +W K +  + E+W R+++ +P G RV G I  F   G  IH+ L   
Sbjct: 61  PYYEEISQAAFEELWQKQLLVWMEDWQRIQRMFPIGARVEGWIEAFFPQGTLIHL-LEPH 119

Query: 121 GYAVTAYEPVRSQVDHSYLYPRYLIEGTVQGVDDVNCWLVLGNCTMSGGTD 171
              +T    + +     ++YPRY +   V G D  N W++L +  + G  D
Sbjct: 120 AVGLTDTSALEAGTPPEWMYPRYRVVAEVSGYDQSNQWVLLAHAEVLGSQD 170


>C4BWW2.1 C4BWW2_9FUSO Putative uncharacterized protein
          Length = 154

 Score = 77.4 bits (189), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 8/146 (5%)

Query: 22  WYFEIDGQQTAYRQIVARQEGACRVSGSPDFYLTDQSVEWMEGDIPIESA-EFEAVWAKA 80
           ++ E++ + TA RQ+   +     +S   +  L DQ V+  E D  I S  EFE VW  A
Sbjct: 13  YWIEVNDEGTALRQVTIDENNITSIS-CLEPCLADQYVD-TENDCEIISKDEFEKVWENA 70

Query: 81  MAPYQEEWNRVRQRYPEGRRVAGAIMFFSIHGIHIALSDGGYAVTAYEPVRSQVDHSYLY 140
           + PY++ WN  + +Y +G+ ++G I +F   G  + L++ GY     E  R +     LY
Sbjct: 71  VLPYRKIWNTEKLKYKKGQNISGIIKYFYPQGAVLDLNN-GYGCMNIENCREKP----LY 125

Query: 141 PRYLIEGTVQGVDDVNCWLVLGNCTM 166
           P Y + G + G D+ N W+++ NC +
Sbjct: 126 PGYSVSGIISGYDEKNMWILIENCEL 151


>A6LX22.1 A6LX22_CLOB8 Putative uncharacterized protein
          Length = 166

 Score = 66.2 bits (160), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 3/133 (2%)

Query: 32  AYRQIV---ARQEGACRVSGSPDFYLTDQSVEWMEGDIPIESAEFEAVWAKAMAPYQEEW 88
           A RQI+    R   + R      F+L +  +E  E D  +   EFE VW+       E+W
Sbjct: 27  AERQIMICDNRYIASNREDNDMGFFLAEGLIETNELDEVVSQNEFEEVWSIHSKCILEDW 86

Query: 89  NRVRQRYPEGRRVAGAIMFFSIHGIHIALSDGGYAVTAYEPVRSQVDHSYLYPRYLIEGT 148
            R ++ + +G+ V G +  F   G+ I L +   A+  YE      +   LYP +L+   
Sbjct: 87  LRAKEYFTKGKEVEGILKVFYPQGVIIELENKTIAIADYEECARNSEAKNLYPNHLVSAK 146

Query: 149 VQGVDDVNCWLVL 161
           V+  D+ N W++L
Sbjct: 147 VKDYDEKNMWIIL 159


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.136    0.423 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,143,781,502
Number of extensions: 45080669
Number of successful extensions: 94367
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 94362
Number of HSP's successfully gapped: 4
Length of query: 179
Length of database: 3,060,696,203
Length adjustment: 127
Effective length of query: 52
Effective length of database: 1,864,227,298
Effective search space: 96939819496
Effective search space used: 96939819496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)