BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0566.0006.p (399 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B2TMY3.1 B2TMY3_CLOBB Saccharopine dehydrogenase EC=1.5.1.7 688 0.0 C4IHF8.1 C4IHF8_CLOBU Saccharopine dehydrogenase EC=1.5.1.7 687 0.0 B1QWE2.1 B1QWE2_CLOBU Saccharopine dehydrogenase EC=1.5.1.7 687 0.0 B1HRU5.1 B1HRU5_LYSSC Putative uncharacterized protein 686 0.0 Q24QT2.1 Q24QT2_DESHY Putative uncharacterized protein 685 0.0 >B2TMY3.1 B2TMY3_CLOBB Saccharopine dehydrogenase EC=1.5.1.7 Length = 399 Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/398 (80%), Positives = 358/398 (89%) Query: 1 LGKALIIXXXXXXXXXXHKCCQNPDVFEEICIASRTLAKCEALKDKLAGGQTKISTAQLD 60 +GKALII HKCCQN DVFEEICIASRTL+KC+ALK KL GG+TKI TA++D Sbjct: 1 MGKALIIGAGGVASVAIHKCCQNSDVFEEICIASRTLSKCDALKAKLDGGKTKIQTAKVD 60 Query: 61 ADNTDEVIELIKSFQPDVVINVALPYQDLTIMDACLATGVHYVDTANYEPQDTAKFEYSW 120 ADN DE+IELI+ F PDVVIN+ALPYQDLTIMDACLAT HYVDTANYEP DTAKFEY W Sbjct: 61 ADNVDELIELIEKFNPDVVINLALPYQDLTIMDACLATKTHYVDTANYEPIDTAKFEYKW 120 Query: 121 QWAYKERFEKAGITALLGSGFDPGVTGVFTAYAQKHYFDEIHTIDIVDANAGDHGYPFAT 180 QWAYK++FE+AGITALLGSGFDPGVTGVF+AYAQKHYFDEIH IDIVDANAGDHGYPFAT Sbjct: 121 QWAYKKKFEEAGITALLGSGFDPGVTGVFSAYAQKHYFDEIHYIDIVDANAGDHGYPFAT 180 Query: 181 NFNPEINIREITANGRYFENGEWIETPPLSEKKVYDLPEIGPKDIYLLYHEELESLAVNI 240 NFNPEINIREITANG Y ENG W+ET PL K+VYDLP+IGPKDIYLL+HEELESL +NI Sbjct: 181 NFNPEINIREITANGSYLENGAWVETKPLELKEVYDLPQIGPKDIYLLHHEELESLGINI 240 Query: 241 PGVKKIRFWMTFSQNYLTHLKVLENVGMTSIEPIVYEGKEIIPLQFLKAILPDPASLGPR 300 G+K+IRFWMTFS+ YLTHLKVLENVGMTSIEPI +EG++I+PLQFLKA+LPDPASLGPR Sbjct: 241 KGIKRIRFWMTFSEKYLTHLKVLENVGMTSIEPIEFEGQKIVPLQFLKAVLPDPASLGPR 300 Query: 301 TKGKTNIGCIIQGTKDGQPKTYYVYNVCDHEECYREVGSQAISYTTGVPAMIGAMLIIKG 360 TKGKTNIGCI QG KDG KTYY+YN+CDHEECY+EVGSQAISYTTGVPAMIGA +I+KG Sbjct: 301 TKGKTNIGCIFQGIKDGVEKTYYIYNICDHEECYKEVGSQAISYTTGVPAMIGASMILKG 360 Query: 361 IWKKPGVYNVEEFDPDPFMDALNKHGLPWQEDFSPTLL 398 +W KPGV+N+EEF+PDPFM+ LNK GLPWQEDF+PTL+ Sbjct: 361 LWNKPGVHNIEEFNPDPFMNELNKGGLPWQEDFNPTLI 398 >C4IHF8.1 C4IHF8_CLOBU Saccharopine dehydrogenase EC=1.5.1.7 Length = 399 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/398 (79%), Positives = 360/398 (90%) Query: 1 LGKALIIXXXXXXXXXXHKCCQNPDVFEEICIASRTLAKCEALKDKLAGGQTKISTAQLD 60 +G+ALII HKCCQN +VFEEICIASRTL+KC+ALK+KL GG+TKI TA++D Sbjct: 1 MGRALIIGAGGVASVAIHKCCQNSEVFEEICIASRTLSKCDALKEKLQGGKTKIQTAKVD 60 Query: 61 ADNTDEVIELIKSFQPDVVINVALPYQDLTIMDACLATGVHYVDTANYEPQDTAKFEYSW 120 ADN DE++ LI F+PDVVIN+ALPYQDLTIMDACLAT VHYVDTANYEP DTAKFEY W Sbjct: 61 ADNVDELVALINDFKPDVVINLALPYQDLTIMDACLATKVHYVDTANYEPLDTAKFEYKW 120 Query: 121 QWAYKERFEKAGITALLGSGFDPGVTGVFTAYAQKHYFDEIHTIDIVDANAGDHGYPFAT 180 QW Y+ERFEKAGITALLGSGFDPGVTGVF+AYAQKHYFDEIH IDIVDANAGDHGYPFAT Sbjct: 121 QWEYRERFEKAGITALLGSGFDPGVTGVFSAYAQKHYFDEIHYIDIVDANAGDHGYPFAT 180 Query: 181 NFNPEINIREITANGRYFENGEWIETPPLSEKKVYDLPEIGPKDIYLLYHEELESLAVNI 240 NFNPEINIREITANG Y+E+G+W+ET PL K+VYDLP+IGPKD+YLL+HEELESL +NI Sbjct: 181 NFNPEINIREITANGSYWEDGKWVETKPLELKEVYDLPQIGPKDVYLLHHEELESLGLNI 240 Query: 241 PGVKKIRFWMTFSQNYLTHLKVLENVGMTSIEPIVYEGKEIIPLQFLKAILPDPASLGPR 300 G+K+IRFWMTFS+ YLTHLKVLENVGMTSIEPI +EG++I+PLQFLKA+LPDPASLGPR Sbjct: 241 KGIKRIRFWMTFSEKYLTHLKVLENVGMTSIEPIEFEGQKIVPLQFLKAVLPDPASLGPR 300 Query: 301 TKGKTNIGCIIQGTKDGQPKTYYVYNVCDHEECYREVGSQAISYTTGVPAMIGAMLIIKG 360 TKGKTNIGCI QG KDG+PKTYYVYNVCDHE CY+EVGSQAISYTTGVPAMIGA +I+KG Sbjct: 301 TKGKTNIGCIFQGIKDGEPKTYYVYNVCDHEACYKEVGSQAISYTTGVPAMIGASMILKG 360 Query: 361 IWKKPGVYNVEEFDPDPFMDALNKHGLPWQEDFSPTLL 398 +W KPGV+N+EEFDPDPFM+ LNK GLPW EDF+PTL+ Sbjct: 361 LWNKPGVHNIEEFDPDPFMEELNKWGLPWIEDFNPTLI 398 >B1QWE2.1 B1QWE2_CLOBU Saccharopine dehydrogenase EC=1.5.1.7 Length = 399 Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/398 (79%), Positives = 360/398 (90%) Query: 1 LGKALIIXXXXXXXXXXHKCCQNPDVFEEICIASRTLAKCEALKDKLAGGQTKISTAQLD 60 +G+ALII HKCCQN +VFEEICIASRTL+KC+ALK+KL GG+TKI TA++D Sbjct: 1 MGRALIIGAGGVASVAIHKCCQNSEVFEEICIASRTLSKCDALKEKLQGGKTKIQTAKVD 60 Query: 61 ADNTDEVIELIKSFQPDVVINVALPYQDLTIMDACLATGVHYVDTANYEPQDTAKFEYSW 120 ADN DE++ LI F+PDVVIN+ALPYQDLTIMDACLAT VHYVDTANYEP DTAKFEY W Sbjct: 61 ADNVDELVALINDFKPDVVINLALPYQDLTIMDACLATKVHYVDTANYEPLDTAKFEYKW 120 Query: 121 QWAYKERFEKAGITALLGSGFDPGVTGVFTAYAQKHYFDEIHTIDIVDANAGDHGYPFAT 180 QW Y+ERFEKAGITALLGSGFDPGVTGVF+AYAQKHYFDEIH IDIVDANAGDHGYPFAT Sbjct: 121 QWEYRERFEKAGITALLGSGFDPGVTGVFSAYAQKHYFDEIHYIDIVDANAGDHGYPFAT 180 Query: 181 NFNPEINIREITANGRYFENGEWIETPPLSEKKVYDLPEIGPKDIYLLYHEELESLAVNI 240 NFNPEINIREITANG Y+E+G+W+ET PL K+VYDLP+IGPKD+YLL+HEELESL +NI Sbjct: 181 NFNPEINIREITANGSYWEDGKWVETKPLELKEVYDLPQIGPKDVYLLHHEELESLGLNI 240 Query: 241 PGVKKIRFWMTFSQNYLTHLKVLENVGMTSIEPIVYEGKEIIPLQFLKAILPDPASLGPR 300 G+K+IRFWMTFS+ YLTHLKVLENVGMTSIEPI +EG++I+PLQFLKA+LPDPASLGPR Sbjct: 241 KGIKRIRFWMTFSEKYLTHLKVLENVGMTSIEPIEFEGQKIVPLQFLKAVLPDPASLGPR 300 Query: 301 TKGKTNIGCIIQGTKDGQPKTYYVYNVCDHEECYREVGSQAISYTTGVPAMIGAMLIIKG 360 TKGKTNIGCI QG KDG+PKTYYVYNVCDHE CY+EVGSQAISYTTGVPAMIGA +I+KG Sbjct: 301 TKGKTNIGCIFQGIKDGEPKTYYVYNVCDHEACYKEVGSQAISYTTGVPAMIGASMILKG 360 Query: 361 IWKKPGVYNVEEFDPDPFMDALNKHGLPWQEDFSPTLL 398 +W KPGV+N+EEFDPDPFM+ LNK GLPW EDF+PTL+ Sbjct: 361 LWNKPGVHNIEEFDPDPFMEELNKWGLPWIEDFNPTLI 398 >B1HRU5.1 B1HRU5_LYSSC Putative uncharacterized protein Length = 409 Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/399 (81%), Positives = 360/399 (90%) Query: 1 LGKALIIXXXXXXXXXXHKCCQNPDVFEEICIASRTLAKCEALKDKLAGGQTKISTAQLD 60 +GKALII HKC QN DVFEEICIASRT++KC+ALK+KL GG+TKI TAQ+D Sbjct: 1 MGKALIIGAGGVASVVVHKCVQNSDVFEEICIASRTVSKCDALKEKLDGGKTKIHTAQVD 60 Query: 61 ADNTDEVIELIKSFQPDVVINVALPYQDLTIMDACLATGVHYVDTANYEPQDTAKFEYSW 120 ADNT+EVIELIK+F PDVVINVALPYQDLTIMDACLATGVHYVDTANYEP +TAKFEY W Sbjct: 61 ADNTEEVIELIKAFGPDVVINVALPYQDLTIMDACLATGVHYVDTANYEPPETAKFEYKW 120 Query: 121 QWAYKERFEKAGITALLGSGFDPGVTGVFTAYAQKHYFDEIHTIDIVDANAGDHGYPFAT 180 QWAYKE+FEKAG+TALLGSGFDPGVTGVFTA+AQKH FDEIH IDIVDANAGDHGY FAT Sbjct: 121 QWAYKEKFEKAGLTALLGSGFDPGVTGVFTAHAQKHEFDEIHYIDIVDANAGDHGYHFAT 180 Query: 181 NFNPEINIREITANGRYFENGEWIETPPLSEKKVYDLPEIGPKDIYLLYHEELESLAVNI 240 NFNPEINIREITANGRY++ GEW+ET PL +K+VY+LPEIGPKDIYLLYHEELESLA NI Sbjct: 181 NFNPEINIREITANGRYWKEGEWVETAPLEKKEVYNLPEIGPKDIYLLYHEELESLAKNI 240 Query: 241 PGVKKIRFWMTFSQNYLTHLKVLENVGMTSIEPIVYEGKEIIPLQFLKAILPDPASLGPR 300 G+K+IRFWMTFS+ YLTHLKVLENVGMTSIEPI +EG+ I P+ FLKA+LPDPASLGPR Sbjct: 241 KGLKQIRFWMTFSEKYLTHLKVLENVGMTSIEPIEFEGQMIQPIHFLKAVLPDPASLGPR 300 Query: 301 TKGKTNIGCIIQGTKDGQPKTYYVYNVCDHEECYREVGSQAISYTTGVPAMIGAMLIIKG 360 TKGKTNIGCII+G KDGQ KTYYVYNVCDHEECY EVGSQAISYTTGVPAMIGAML++ G Sbjct: 301 TKGKTNIGCIIRGLKDGQEKTYYVYNVCDHEECYNEVGSQAISYTTGVPAMIGAMLVMNG 360 Query: 361 IWKKPGVYNVEEFDPDPFMDALNKHGLPWQEDFSPTLLD 399 W+KPGV+NVE+F+PDPFMDALNK GLPWQE +P LLD Sbjct: 361 EWRKPGVWNVEDFNPDPFMDALNKWGLPWQESHNPELLD 399 >Q24QT2.1 Q24QT2_DESHY Putative uncharacterized protein Length = 401 Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/399 (80%), Positives = 356/399 (89%) Query: 1 LGKALIIXXXXXXXXXXHKCCQNPDVFEEICIASRTLAKCEALKDKLAGGQTKISTAQLD 60 +GKALII HKCCQ P+VFEEICIASRTL KCE ++DKL G +TK+ AQ+D Sbjct: 1 MGKALIIGAGGVANVVAHKCCQVPEVFEEICIASRTLKKCEDIRDKLTGSRTKVRVAQVD 60 Query: 61 ADNTDEVIELIKSFQPDVVINVALPYQDLTIMDACLATGVHYVDTANYEPQDTAKFEYSW 120 AD T+EVI+LIK FQP++VINVALPYQDLTIM+ACLATGVHYVDTANYEP + KFEY W Sbjct: 61 ADQTEEVIQLIKEFQPELVINVALPYQDLTIMEACLATGVHYVDTANYEPPNVPKFEYKW 120 Query: 121 QWAYKERFEKAGITALLGSGFDPGVTGVFTAYAQKHYFDEIHTIDIVDANAGDHGYPFAT 180 QWAY+E+F +AG+TALLGSGFDPGVTGVF AYAQKHYFDEIHTIDIVDAN GDHGYPFAT Sbjct: 121 QWAYREKFAQAGLTALLGSGFDPGVTGVFCAYAQKHYFDEIHTIDIVDANGGDHGYPFAT 180 Query: 181 NFNPEINIREITANGRYFENGEWIETPPLSEKKVYDLPEIGPKDIYLLYHEELESLAVNI 240 NFNPEINIREITA GRY++ GEWIET PLS KKVYDL EIGPK+IYLLYHEELESLA NI Sbjct: 181 NFNPEINIREITAKGRYYKEGEWIETDPLSVKKVYDLEEIGPKNIYLLYHEELESLAQNI 240 Query: 241 PGVKKIRFWMTFSQNYLTHLKVLENVGMTSIEPIVYEGKEIIPLQFLKAILPDPASLGPR 300 G+K+IRFWMTFS NYL HLKVLENVGMTSIEPI +EG++IIPL FLKA+LPDPASLGPR Sbjct: 241 KGIKQIRFWMTFSDNYLNHLKVLENVGMTSIEPIEFEGQQIIPLHFLKAVLPDPASLGPR 300 Query: 301 TKGKTNIGCIIQGTKDGQPKTYYVYNVCDHEECYREVGSQAISYTTGVPAMIGAMLIIKG 360 TKGKTNIGCIIQG KDGQP+TYYVYN+CDH+ECY EVGSQAISYTTGVPAMIGA LI++G Sbjct: 301 TKGKTNIGCIIQGVKDGQPRTYYVYNICDHQECYAEVGSQAISYTTGVPAMIGAKLIMEG 360 Query: 361 IWKKPGVYNVEEFDPDPFMDALNKHGLPWQEDFSPTLLD 399 W+KPGVYNVEEFDPDPFM LNK+GLPW+EDF+PTLLD Sbjct: 361 KWQKPGVYNVEEFDPDPFMADLNKYGLPWREDFAPTLLD 399 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.138 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,574,524,820 Number of extensions: 115655372 Number of successful extensions: 248358 Number of sequences better than 1.0e-05: 386 Number of HSP's gapped: 247668 Number of HSP's successfully gapped: 389 Length of query: 399 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 261 Effective length of database: 1,760,596,133 Effective search space: 459515590713 Effective search space used: 459515590713 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)