BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0566.0005.p (381 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8HZY7.1 B8HZY7_CLOCE Carboxynorspermidine decarboxylase 605 e-171 Q24QT3.1 Q24QT3_DESHY Putative uncharacterized protein 600 e-169 B8FP81.1 B8FP81_DESHD Carboxynorspermidine decarboxylase 600 e-169 B1HRU6.1 B1HRU6_LYSSC Putative uncharacterized protein 599 e-169 A3IG75.1 A3IG75_9BACI Putative uncharacterized protein 596 e-168 >B8HZY7.1 B8HZY7_CLOCE Carboxynorspermidine decarboxylase Length = 382 Score = 605 bits (1561), Expect = e-171, Method: Compositional matrix adjust. Identities = 276/381 (72%), Positives = 337/381 (88%) Query: 1 MKDIDIDISTLPSPAYLVDERLLKKNLETLNYVQEKTGAKILLAQKGFSMHALYPLVGKY 60 +K++DIDI +LP+P Y+VDERLL KNLE L+ VQ++TG KILLAQKGFSMH++YPLVGKY Sbjct: 2 IKNLDIDIKSLPTPCYIVDERLLIKNLEILDSVQKRTGCKILLAQKGFSMHSVYPLVGKY 61 Query: 61 LHGVTSSSLFEARLGYEEMGKEVHVYAPAYMDREFDELLSYTDHIVFNSFDQWARFKNRV 120 L GVTSSSLFEA+LGYE+MGKEVH+YAPAY++ EFDE++ Y+DHIVFNSF QW ++K++V Sbjct: 62 LAGVTSSSLFEAKLGYEKMGKEVHIYAPAYIEEEFDEIMKYSDHIVFNSFHQWNKYKDKV 121 Query: 121 QSAPKAISCGIRVNPEYSEIEVPLYDPCYNYSRMGVTLPNFRPEELDGIDGLHFHTMCEQ 180 +++ K IS GIR+NPEYSE+E P+YDPCY +SR+GVTLPNF+PE LDGI+GLHFHTMCEQ Sbjct: 122 RTSTKKISFGIRINPEYSELEHPIYDPCYKFSRLGVTLPNFKPEGLDGIEGLHFHTMCEQ 181 Query: 181 NSDTLERTLKVVEEKFGQYLHGMKWLNFGGGHHITRPDYDLETLIRCILHMKETYNVQIY 240 NSDTLERT+KVV+EKFG+Y+ MKWLNFGGGHHITRPDYD+E L+R I + ++ Y V +Y Sbjct: 182 NSDTLERTIKVVDEKFGRYIKDMKWLNFGGGHHITRPDYDMEALVRSINYFQDKYGVSVY 241 Query: 241 LEPGEAVALNTGYLVATVLDTMHNGMDIAILDTSAECHMPDVLAMPYRPGIIGAGEPGEY 300 LEPGEAVALNTGYLVA VLD + N M+IAILDTSA CHMPDV+ MPYRP IIGAG+P E Sbjct: 242 LEPGEAVALNTGYLVAKVLDIVENEMNIAILDTSAACHMPDVIEMPYRPNIIGAGKPDEN 301 Query: 301 PYTYRLGGMTCLAGDVIGDYSFKEPLKYGDKLVFLDMAHYSMVKNHMFNGVNLPAIASYN 360 P+TYRLGG TCLAGD+IGDYSF + LK GD+LVF DMAHY+MVKN+ FNGVNLPAIA YN Sbjct: 302 PHTYRLGGHTCLAGDIIGDYSFVQNLKPGDRLVFCDMAHYTMVKNNTFNGVNLPAIALYN 361 Query: 361 DEEGLKVIREFEYQDFSNRLS 381 ++EG+++I++F Y+DF NRLS Sbjct: 362 EKEGIRIIKQFGYEDFENRLS 382 >Q24QT3.1 Q24QT3_DESHY Putative uncharacterized protein Length = 376 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 276/376 (73%), Positives = 322/376 (85%) Query: 6 IDISTLPSPAYLVDERLLKKNLETLNYVQEKTGAKILLAQKGFSMHALYPLVGKYLHGVT 65 ++I LP+P+Y+VDE LL++NLE L VQE+TG KILLA KGFSMHA++PLVG+YL G+ Sbjct: 1 MNIKELPTPSYVVDENLLRRNLEILQSVQERTGCKILLALKGFSMHAVFPLVGQYLKGIA 60 Query: 66 SSSLFEARLGYEEMGKEVHVYAPAYMDREFDELLSYTDHIVFNSFDQWARFKNRVQSAPK 125 +SSLFEARLG EMGKEVHVY+PAY++ EFDELL Y DH+VFNSFDQW +FK++V++ P Sbjct: 61 ASSLFEARLGVAEMGKEVHVYSPAYIEEEFDELLGYCDHMVFNSFDQWRKFKDKVKNHPG 120 Query: 126 AISCGIRVNPEYSEIEVPLYDPCYNYSRMGVTLPNFRPEELDGIDGLHFHTMCEQNSDTL 185 I CGIRVNPEYSEI +Y+PCY SR+GVTL NFRPEEL+GI GLHFHT+CEQNSDTL Sbjct: 121 HIECGIRVNPEYSEIATDIYNPCYQNSRLGVTLANFRPEELEGIAGLHFHTLCEQNSDTL 180 Query: 186 ERTLKVVEEKFGQYLHGMKWLNFGGGHHITRPDYDLETLIRCILHMKETYNVQIYLEPGE 245 ERTLKVVEEKFG++L MKWLN GGGHHITRPDYD+ETL+RCILH++E Y V+IYLEPGE Sbjct: 181 ERTLKVVEEKFGEHLRKMKWLNLGGGHHITRPDYDIETLVRCILHLQEKYGVEIYLEPGE 240 Query: 246 AVALNTGYLVATVLDTMHNGMDIAILDTSAECHMPDVLAMPYRPGIIGAGEPGEYPYTYR 305 A+ALNTG+LV VLD + NGM IA+LD SA CHMPDVL MPYRP II GEPGE+PYTYR Sbjct: 241 AIALNTGFLVTKVLDIVDNGMKIALLDASAACHMPDVLEMPYRPAIINGGEPGEHPYTYR 300 Query: 306 LGGMTCLAGDVIGDYSFKEPLKYGDKLVFLDMAHYSMVKNHMFNGVNLPAIASYNDEEGL 365 LGG TCLAGDVIGDYSF EPLK GDKL+F DMAHY+MVKN+MFNGVNLP I YN++EG Sbjct: 301 LGGNTCLAGDVIGDYSFAEPLKPGDKLIFCDMAHYTMVKNNMFNGVNLPNIMLYNEKEGF 360 Query: 366 KVIREFEYQDFSNRLS 381 K+IR F Y+DF NRLS Sbjct: 361 KLIRRFGYEDFKNRLS 376 >B8FP81.1 B8FP81_DESHD Carboxynorspermidine decarboxylase Length = 376 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 276/376 (73%), Positives = 322/376 (85%) Query: 6 IDISTLPSPAYLVDERLLKKNLETLNYVQEKTGAKILLAQKGFSMHALYPLVGKYLHGVT 65 ++I LP+P+Y+VDE LL++NLE L VQE+TG KILLA KGFSMHA++PLVG+YL G+ Sbjct: 1 MNIKELPTPSYVVDENLLRRNLEILQSVQERTGCKILLALKGFSMHAVFPLVGQYLKGIA 60 Query: 66 SSSLFEARLGYEEMGKEVHVYAPAYMDREFDELLSYTDHIVFNSFDQWARFKNRVQSAPK 125 +SSLFEARLG EMGKEVHVY+PAY++ EFDELL Y DH+VFNSFDQW +FK++V++ P Sbjct: 61 ASSLFEARLGVAEMGKEVHVYSPAYIEEEFDELLGYCDHMVFNSFDQWRKFKDKVKNHPG 120 Query: 126 AISCGIRVNPEYSEIEVPLYDPCYNYSRMGVTLPNFRPEELDGIDGLHFHTMCEQNSDTL 185 I CGIRVNPEYSEI +Y+PCY SR+GVTL NFRPEEL+GI GLHFHT+CEQNSDTL Sbjct: 121 HIECGIRVNPEYSEIATDIYNPCYQNSRLGVTLANFRPEELEGIAGLHFHTLCEQNSDTL 180 Query: 186 ERTLKVVEEKFGQYLHGMKWLNFGGGHHITRPDYDLETLIRCILHMKETYNVQIYLEPGE 245 ERTLKVVEEKFG++L MKWLN GGGHHITRPDYD+ETL+RCILH++E Y V+IYLEPGE Sbjct: 181 ERTLKVVEEKFGEHLRKMKWLNLGGGHHITRPDYDIETLVRCILHLQEKYGVEIYLEPGE 240 Query: 246 AVALNTGYLVATVLDTMHNGMDIAILDTSAECHMPDVLAMPYRPGIIGAGEPGEYPYTYR 305 A+ALNTG+LV VLD + NGM IA+LD SA CHMPDVL MPYRP II GEPGE+PYTYR Sbjct: 241 AIALNTGFLVTKVLDIVDNGMKIALLDASAACHMPDVLEMPYRPAIINGGEPGEHPYTYR 300 Query: 306 LGGMTCLAGDVIGDYSFKEPLKYGDKLVFLDMAHYSMVKNHMFNGVNLPAIASYNDEEGL 365 LGG TCLAGDVIGDYSF EPLK GDKL+F DMAHY+MVKN+MFNGVNLP I YN++EG Sbjct: 301 LGGNTCLAGDVIGDYSFAEPLKPGDKLIFCDMAHYTMVKNNMFNGVNLPNIMLYNEKEGF 360 Query: 366 KVIREFEYQDFSNRLS 381 K+IR F Y+DF NRLS Sbjct: 361 KLIRRFGYEDFKNRLS 376 >B1HRU6.1 B1HRU6_LYSSC Putative uncharacterized protein Length = 379 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 277/376 (73%), Positives = 324/376 (86%) Query: 6 IDISTLPSPAYLVDERLLKKNLETLNYVQEKTGAKILLAQKGFSMHALYPLVGKYLHGVT 65 ID S +PSP+Y+VDERLL KNLE L +Q++TG +ILLA KGFSMH+ +PLVG+YL G+T Sbjct: 4 IDFSKVPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGIT 63 Query: 66 SSSLFEARLGYEEMGKEVHVYAPAYMDREFDELLSYTDHIVFNSFDQWARFKNRVQSAPK 125 +SSL EARLGYE+MGKEVHVYAPAY++ E DELL Y DHIVFNSF+QWA+FK++V+SA K Sbjct: 64 ASSLHEARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHIVFNSFNQWAQFKDKVKSAGK 123 Query: 126 AISCGIRVNPEYSEIEVPLYDPCYNYSRMGVTLPNFRPEELDGIDGLHFHTMCEQNSDTL 185 I CGIRVNPEYSEIE LYDPCY SR+G TL NF +LDGIDGLHFH MCEQNSDTL Sbjct: 124 TIECGIRVNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNSDTL 183 Query: 186 ERTLKVVEEKFGQYLHGMKWLNFGGGHHITRPDYDLETLIRCILHMKETYNVQIYLEPGE 245 ER ++VVEEKFG LH MKWLNFGGGHHITR DYD+E L+ I +++E YN+ +YLEPGE Sbjct: 184 ERIIEVVEEKFGDVLHQMKWLNFGGGHHITREDYDVEKLVNIINYIQEKYNLLVYLEPGE 243 Query: 246 AVALNTGYLVATVLDTMHNGMDIAILDTSAECHMPDVLAMPYRPGIIGAGEPGEYPYTYR 305 AVALNTGYLVATVLD NGMD+AILDTSA CHMPDVL MPYRP IIG+G+ E+ +TYR Sbjct: 244 AVALNTGYLVATVLDIQKNGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANEFAHTYR 303 Query: 306 LGGMTCLAGDVIGDYSFKEPLKYGDKLVFLDMAHYSMVKNHMFNGVNLPAIASYNDEEGL 365 LGG+TCLAGDVIGDYSF++PLK GD+LVF DMAHYSMVKNHMFNGVNLP+I SYNDEEG+ Sbjct: 304 LGGLTCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGI 363 Query: 366 KVIREFEYQDFSNRLS 381 K+IREF+++D+S RLS Sbjct: 364 KIIREFKFEDYSGRLS 379 >A3IG75.1 A3IG75_9BACI Putative uncharacterized protein Length = 379 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 274/376 (72%), Positives = 323/376 (85%) Query: 6 IDISTLPSPAYLVDERLLKKNLETLNYVQEKTGAKILLAQKGFSMHALYPLVGKYLHGVT 65 ID S +PSP+Y+VDERLL KNLE L +Q++TG +ILLA KGFSMH+ +PLVG+YL G+T Sbjct: 4 IDFSKVPSPSYVVDERLLTKNLELLKSIQDRTGCRILLALKGFSMHSTFPLVGEYLAGIT 63 Query: 66 SSSLFEARLGYEEMGKEVHVYAPAYMDREFDELLSYTDHIVFNSFDQWARFKNRVQSAPK 125 +SSL EARLGYE+MGKEVHVYAPAY++ E DELL Y DH+VFNSF+QWA+FK++V+S K Sbjct: 64 ASSLHEARLGYEKMGKEVHVYAPAYIEHEMDELLGYVDHVVFNSFNQWAQFKDKVKSTGK 123 Query: 126 AISCGIRVNPEYSEIEVPLYDPCYNYSRMGVTLPNFRPEELDGIDGLHFHTMCEQNSDTL 185 I CGIR+NPEYSEIE LYDPCY SR+G TL NF +LDGIDGLHFH MCEQNSDTL Sbjct: 124 TIECGIRLNPEYSEIETALYDPCYTNSRLGTTLANFDKSQLDGIDGLHFHAMCEQNSDTL 183 Query: 186 ERTLKVVEEKFGQYLHGMKWLNFGGGHHITRPDYDLETLIRCILHMKETYNVQIYLEPGE 245 ER ++VVEEKFG LH MKWLNFGGGHHITR DYD+E L+ I +++E YN+ +YLEPGE Sbjct: 184 ERIIEVVEEKFGDVLHQMKWLNFGGGHHITREDYDVEKLVNIINYVQEKYNLLVYLEPGE 243 Query: 246 AVALNTGYLVATVLDTMHNGMDIAILDTSAECHMPDVLAMPYRPGIIGAGEPGEYPYTYR 305 AVALNTGYLVATVLD NGMD+AILDTSA CHMPDVL MPYRP IIG+G+ E+ +TYR Sbjct: 244 AVALNTGYLVATVLDIQENGMDLAILDTSATCHMPDVLEMPYRPMIIGSGQANEFAHTYR 303 Query: 306 LGGMTCLAGDVIGDYSFKEPLKYGDKLVFLDMAHYSMVKNHMFNGVNLPAIASYNDEEGL 365 LGG+TCLAGDVIGDYSF++PLK GD+LVF DMAHYSMVKNHMFNGVNLP+I SYNDEEG+ Sbjct: 304 LGGLTCLAGDVIGDYSFEQPLKPGDRLVFTDMAHYSMVKNHMFNGVNLPSIVSYNDEEGI 363 Query: 366 KVIREFEYQDFSNRLS 381 K+IREF+++D+S RLS Sbjct: 364 KIIREFKFEDYSGRLS 379 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.139 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,454,798,236 Number of extensions: 109044923 Number of successful extensions: 220116 Number of sequences better than 1.0e-05: 318 Number of HSP's gapped: 219252 Number of HSP's successfully gapped: 319 Length of query: 381 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 244 Effective length of database: 1,770,017,148 Effective search space: 431884184112 Effective search space used: 431884184112 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)