BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0081.p (416 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DIL9.1 B1DIL9_9BACL Putative uncharacterized protein 330 2e-88 C2MZ89.1 C2MZ89_BACCE Putative uncharacterized protein 253 2e-65 B5UR91.1 B5UR91_BACCE Putative uncharacterized protein 253 2e-65 C2Y920.1 C2Y920_BACCE Putative uncharacterized protein 253 2e-65 B7HID9.1 B7HID9_BACC4 Putative uncharacterized protein 253 2e-65 >B1DIL9.1 B1DIL9_9BACL Putative uncharacterized protein Length = 411 Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 185/411 (45%), Positives = 258/411 (62%), Gaps = 1/411 (0%) Query: 4 MKSRNLATISLAIMACGFLIT-LFLPENLAVVLLRGGFEAGLVGGIADWFAVTALFRHPL 62 MKSR +A++SLAIM GF++T L+LP+N LL GFEAGLVGGIADWFAVTALFRHP Sbjct: 1 MKSRYIASLSLAIMFIGFIVTRLWLPDNWWTRLLESGFEAGLVGGIADWFAVTALFRHPF 60 Query: 63 GLPIPHTSLLLKNRDKIIQSLISAMENELLNKASIENKLRKIRIVSLGSTMLTRLFARKK 122 G+PIPHTSLLLKNRDKI+ SLISAMENELLNK SI KL+++++ ++ LT L ++K Sbjct: 61 GIPIPHTSLLLKNRDKIVNSLISAMENELLNKESISKKLKELKLFKGLASGLTGLVGKRK 120 Query: 123 ARAEMLEQVSAFVQKLPVEQAVPYIQSVAAGYIREAKLGTAVDTIVTKLMNDGKDVAALD 182 R +L + ++++P+E+ IQ +A YIR+ + VD + K + DG D ALD Sbjct: 121 LRVGVLRFAQSSLEQVPLEKLSAKIQELAVDYIRKQDIVPIVDKLTDKFVYDGWDEKALD 180 Query: 183 FALEGISGWVERPETRAMLGKIASEKLAEVKLGGLKGMAFQAFVGFVDAEMLGGMLQGMV 242 F L WV++ ET G++A K+ E+++GG G A QAFVGF+ E LG ++QGM+ Sbjct: 181 FVLVQGQEWVKKRETEQFFGRLAHSKMEELQVGGFMGFAVQAFVGFMSPEKLGPIIQGML 240 Query: 243 QSGINDFRSEDSPYXXXXXXXXXVAIFQMVNDEARIAAIKEWGLNELQSEAAASFLREQL 302 S I + + +P + ++E +A +K + +S F+ +L Sbjct: 241 LSSIKELSTPGNPNRQKLLDELKKHALALSSNEELMARLKAGLESGAESVGIERFIHLRL 300 Query: 303 EHFRGKAVAWLEEERSAGGRKLFGLYAMLARRIGKXXXXXXXXXXXXXASLISFVEANHY 362 E R + LEEE GGR L + L + A L+S++E NHY Sbjct: 301 EELRQLLLDKLEEECLNGGRILVKAFRFLVEQAKSREEVINRWEQSILAYLVSWIEKNHY 360 Query: 363 RVGLLVKENLDLMDDASLVNMLEDKVGKDLQWIRVNGAVCGFVVGLVLTVF 413 R+G+LV++N++ MDD +LV MLE K+GKDLQWIRVNGAVCGF+VG++L+ F Sbjct: 361 RIGVLVRDNVNQMDDQALVQMLEQKIGKDLQWIRVNGAVCGFIVGIILSFF 411 >C2MZ89.1 C2MZ89_BACCE Putative uncharacterized protein Length = 415 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/407 (32%), Positives = 220/407 (54%), Gaps = 1/407 (0%) Query: 4 MKSRNLATISLAIMACGFLITLFLPENLAVVLLRGGFEAGLVGGIADWFAVTALFRHPLG 63 ++++ +A ISL +M GF ++ +A +++GGFEAGLVGG+ADWFAVTALFRHP+G Sbjct: 3 LQTKYIAGISLGVMGVGFAASIPFQGTIAGEIIQGGFEAGLVGGLADWFAVTALFRHPMG 62 Query: 64 LPIPHTSLLLKNRDKIIQSLISAMENELLNKASIENKLRKIRIVSLGSTMLTRLFARKKA 123 +PIPHT+LL KNR ++ + LI+ +ENE L K SI NK++++++ + + R Sbjct: 63 IPIPHTALLPKNRKRVTKGLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSDAV 122 Query: 124 RAEMLEQVSAFVQKLPVEQAVPYIQSVAAGYIREAKLGTAVDTIVTKLMNDGKDVAALDF 183 + ++ + + E+ I+ Y+ + +V +L+ D LD+ Sbjct: 123 KKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTNNILQVLVDQLVVQEYDEKTLDY 182 Query: 184 ALEGISGWVERPETRAMLGKIASEKLAEVKLGGLKGMAFQAFVGFVDAEMLGGMLQGMVQ 243 L + W + E R LG + + + +K+ G ++F+ VD + +GG+LQ + Sbjct: 183 ILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKFII 242 Query: 244 SGINDFRSEDSPYXXXXXXXXXVAIFQMVNDEARIAAIKEWGLNELQSEAAASFLREQLE 303 S IN + D+ I + +EA + ++ W + + A ++E LE Sbjct: 243 SNINSLQDADNSTRQLILSKIRQEIINVKENEALLQELENWKEKWIANWNATDKIKEMLE 302 Query: 304 HFRGKAVAWLEEERSAGGRKLFGLYAMLARRIGKXXXXXXXXXXXXXASLISFVEANHYR 363 + +AVA++ E A + + +I + ++S VE NH + Sbjct: 303 QVQQRAVAFVNNEEFA-DKYVIPFLQKQMNKIKEDEQTVQKIEDWLQKQVVSLVEKNHSK 361 Query: 364 VGLLVKENLDLMDDASLVNMLEDKVGKDLQWIRVNGAVCGFVVGLVL 410 +G LV+ENLD +DD +L+ M+E+ VGKDLQWIRVNGAVCGF++GLVL Sbjct: 362 IGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCGFMIGLVL 408 >B5UR91.1 B5UR91_BACCE Putative uncharacterized protein Length = 415 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/407 (32%), Positives = 220/407 (54%), Gaps = 1/407 (0%) Query: 4 MKSRNLATISLAIMACGFLITLFLPENLAVVLLRGGFEAGLVGGIADWFAVTALFRHPLG 63 ++++ +A ISL +M GF ++ +A +++GGFEAGLVGG+ADWFAVTALFRHP+G Sbjct: 3 LQTKYIAGISLGVMGVGFAASIPFQGTIAGEIIQGGFEAGLVGGLADWFAVTALFRHPMG 62 Query: 64 LPIPHTSLLLKNRDKIIQSLISAMENELLNKASIENKLRKIRIVSLGSTMLTRLFARKKA 123 +PIPHT+LL KNR ++ + LI+ +ENE L K SI NK++++++ + + R Sbjct: 63 IPIPHTALLPKNRKRVTKGLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREMQSDAV 122 Query: 124 RAEMLEQVSAFVQKLPVEQAVPYIQSVAAGYIREAKLGTAVDTIVTKLMNDGKDVAALDF 183 + ++ + + E+ I+ Y+ + +V +L+ D LD+ Sbjct: 123 KKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTNNILQVLVDQLVVQEYDEKTLDY 182 Query: 184 ALEGISGWVERPETRAMLGKIASEKLAEVKLGGLKGMAFQAFVGFVDAEMLGGMLQGMVQ 243 L + W + E R LG + + + +K+ G ++F+ VD + +GG+LQ + Sbjct: 183 ILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKFII 242 Query: 244 SGINDFRSEDSPYXXXXXXXXXVAIFQMVNDEARIAAIKEWGLNELQSEAAASFLREQLE 303 S IN + D+ I + +EA + ++ W + + A ++E LE Sbjct: 243 SNINSLQDADNSTRQLILSKIRQEIINVKENEALLQELENWKEKWIANWNATDKIKEMLE 302 Query: 304 HFRGKAVAWLEEERSAGGRKLFGLYAMLARRIGKXXXXXXXXXXXXXASLISFVEANHYR 363 + +AVA++ E A + + +I + ++S VE NH + Sbjct: 303 QVQQRAVAFVNNEEFA-DKYVIPFLQKQMNKIKEDEQTVQKIEDWLQKQVVSLVEKNHSK 361 Query: 364 VGLLVKENLDLMDDASLVNMLEDKVGKDLQWIRVNGAVCGFVVGLVL 410 +G LV+ENLD +DD +L+ M+E+ VGKDLQWIRVNGAVCGF++GLVL Sbjct: 362 IGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCGFMIGLVL 408 >C2Y920.1 C2Y920_BACCE Putative uncharacterized protein Length = 418 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/407 (32%), Positives = 220/407 (54%), Gaps = 1/407 (0%) Query: 4 MKSRNLATISLAIMACGFLITLFLPENLAVVLLRGGFEAGLVGGIADWFAVTALFRHPLG 63 ++++ +A ISL +M GF ++ +A +++GGFEAGLVGG+ADWFAVTALFRHP+G Sbjct: 6 LQTKYIAGISLGVMGVGFAASIPFQGTIAGEIIQGGFEAGLVGGLADWFAVTALFRHPMG 65 Query: 64 LPIPHTSLLLKNRDKIIQSLISAMENELLNKASIENKLRKIRIVSLGSTMLTRLFARKKA 123 +PIPHT+LL KNR ++ + LI+ +ENE L K SI NK++++++ + + R Sbjct: 66 IPIPHTALLPKNRKRVTKGLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREIQSDAV 125 Query: 124 RAEMLEQVSAFVQKLPVEQAVPYIQSVAAGYIREAKLGTAVDTIVTKLMNDGKDVAALDF 183 + ++ + + E+ I+ Y+ + +V +L+ D LD+ Sbjct: 126 KKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTSNILQVLVDQLVVQEYDEKTLDY 185 Query: 184 ALEGISGWVERPETRAMLGKIASEKLAEVKLGGLKGMAFQAFVGFVDAEMLGGMLQGMVQ 243 L + W + E R LG + + + +K+ G ++F+ VD + +GG+LQ + Sbjct: 186 ILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKFII 245 Query: 244 SGINDFRSEDSPYXXXXXXXXXVAIFQMVNDEARIAAIKEWGLNELQSEAAASFLREQLE 303 S IN + D+ I + +EA + ++ W + + A ++E LE Sbjct: 246 SNINSLQDADNSTRQLILVKIRQEIINVKENEALLQELENWKEKWIANWNATDKIKEMLE 305 Query: 304 HFRGKAVAWLEEERSAGGRKLFGLYAMLARRIGKXXXXXXXXXXXXXASLISFVEANHYR 363 + +AVA++ E A + + +I + ++S VE NH + Sbjct: 306 QVQQRAVAFVNNEEFA-DKYVIPFLQKQMNKIKEDEQTVQKIEDWLQKQVVSLVEKNHSK 364 Query: 364 VGLLVKENLDLMDDASLVNMLEDKVGKDLQWIRVNGAVCGFVVGLVL 410 +G LV+ENLD +DD +L+ M+E+ VGKDLQWIRVNGAVCGF++GLVL Sbjct: 365 IGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCGFMIGLVL 411 >B7HID9.1 B7HID9_BACC4 Putative uncharacterized protein Length = 415 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/407 (32%), Positives = 220/407 (54%), Gaps = 1/407 (0%) Query: 4 MKSRNLATISLAIMACGFLITLFLPENLAVVLLRGGFEAGLVGGIADWFAVTALFRHPLG 63 ++++ +A ISL +M GF ++ +A +++GGFEAGLVGG+ADWFAVTALFRHP+G Sbjct: 3 LQTKYIAGISLGVMGVGFAASIPFQGTIAGEIIQGGFEAGLVGGLADWFAVTALFRHPMG 62 Query: 64 LPIPHTSLLLKNRDKIIQSLISAMENELLNKASIENKLRKIRIVSLGSTMLTRLFARKKA 123 +PIPHT+LL KNR ++ + LI+ +ENE L K SI NK++++++ + + R Sbjct: 63 IPIPHTALLPKNRKRVTKGLINTLENEWLTKESITNKVKEMQLAQMVLQIAEREIQSDAV 122 Query: 124 RAEMLEQVSAFVQKLPVEQAVPYIQSVAAGYIREAKLGTAVDTIVTKLMNDGKDVAALDF 183 + ++ + + E+ I+ Y+ + +V +L+ D LD+ Sbjct: 123 KKGIVTIAEKAIVSIDTEKLAVIIEKELKTYLHTINTSNILQVLVDQLVVQEYDEKTLDY 182 Query: 184 ALEGISGWVERPETRAMLGKIASEKLAEVKLGGLKGMAFQAFVGFVDAEMLGGMLQGMVQ 243 L + W + E R LG + + + +K+ G ++F+ VD + +GG+LQ + Sbjct: 183 ILVKVKDWTAQDEARYQLGSLGMKAMENIKVDGFLQFTLKSFMNIVDEDKIGGILQKFII 242 Query: 244 SGINDFRSEDSPYXXXXXXXXXVAIFQMVNDEARIAAIKEWGLNELQSEAAASFLREQLE 303 S IN + D+ I + +EA + ++ W + + A ++E LE Sbjct: 243 SNINSLQDADNSTRQLILAKIRQEIINVKENEALLQELENWKEKWIANWNATDKIKEMLE 302 Query: 304 HFRGKAVAWLEEERSAGGRKLFGLYAMLARRIGKXXXXXXXXXXXXXASLISFVEANHYR 363 + +AVA++ E A + + +I + ++S VE NH + Sbjct: 303 QVQQRAVAFVNNEEFA-DKYVIPFLQKQMNKIKEDEQTVQKIEDWLQKQVVSLVEKNHSK 361 Query: 364 VGLLVKENLDLMDDASLVNMLEDKVGKDLQWIRVNGAVCGFVVGLVL 410 +G LV+ENLD +DD +L+ M+E+ VGKDLQWIRVNGAVCGF++GLVL Sbjct: 362 IGKLVQENLDKLDDKTLIEMIENNVGKDLQWIRVNGAVCGFMIGLVL 408 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.138 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,038,265,648 Number of extensions: 74497581 Number of successful extensions: 217607 Number of sequences better than 1.0e-05: 378 Number of HSP's gapped: 217266 Number of HSP's successfully gapped: 383 Length of query: 416 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 278 Effective length of database: 1,760,596,133 Effective search space: 489445724974 Effective search space used: 489445724974 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)