BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0071.p (361 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4XRX7.1 A4XRX7_PSEMY ABC transporter related 315 6e-84 C3K910.1 C3K910_PSEFS Putative ABC transport system, ATP-binding... 305 5e-81 Q4K8F0.1 Q4K8F0_PSEF5 ABC transporter, ATP-binding protein 305 6e-81 Q4ZW22.1 Q4ZW22_PSEU2 ABC transporter 304 8e-81 Q48L87.1 Q48L87_PSE14 Polyamine ABC transporter, ATP-binding pro... 304 9e-81 >A4XRX7.1 A4XRX7_PSEMY ABC transporter related Length = 328 Score = 315 bits (806), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 162/314 (51%), Positives = 212/314 (67%), Gaps = 14/314 (4%) Query: 18 YLKLQGIRKRFGDVPVLAGVDLNIGEGELVTLLGPSGCGKSTLLRCIAGLTELDSGSILL 77 YL ++G+ K +G P+ +++ IG+G+ +TLLGPSGCGKSTLLRCIAGLT +D G ILL Sbjct: 3 YLNIRGLHKSYGATPIFTDINIEIGQGQFITLLGPSGCGKSTLLRCIAGLTAVDGGQILL 62 Query: 78 ADKELTKLPPRSRDVGMVFQSYALFPNLTVRQNVEYGMRMRGVAPAARRSRCEELLALVD 137 ++L +PP+ R +GMVFQSYALFPN+TV+QNV +G+RM+ V A R E+L LV+ Sbjct: 63 DGQDLVPMPPQKRGIGMVFQSYALFPNMTVQQNVAFGLRMQKVPGAEASKRVAEVLELVE 122 Query: 138 LEDKRDVYPQSLSGGQQQRVALARSLAVQPKXXXXXXXXXXXXXKIRKNLRAEIRDIQRR 197 L D + YPQ LSGGQ QRVALARSL +P+ +IRK+LR +IR IQR Sbjct: 123 LSDYAERYPQQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRAIQRE 182 Query: 198 LGMTTLFVTHDQEEALILSDRICIMNQGRMVQEGSPEQLYTAPRTEFAARFMGSYNVFNR 257 LG+TT+FVTHDQEEAL+LSDRI +MN G++VQ G E LYTAP FAA F+G+YN+ + Sbjct: 183 LGLTTIFVTHDQEEALVLSDRIVLMNGGQIVQSGDAETLYTAPADAFAAGFIGNYNLLDA 242 Query: 258 AEALKLFRRIDSRSDRFAIRPEAVTLLAEGEAIQDDADGMMDVRGQVQAVSILGNIIRAA 317 A +L + R AIRPEA+ ADG + Q+++ S+LGN+IR Sbjct: 243 EAASRLLGQ--PIGSRVAIRPEAIHF----------ADG--GIEAQIRSHSLLGNVIRYR 288 Query: 318 VVAEGVHLTVDLLN 331 V A GV L VD+LN Sbjct: 289 VEARGVELLVDVLN 302 >C3K910.1 C3K910_PSEFS Putative ABC transport system, ATP-binding protein Length = 329 Score = 305 bits (781), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 160/315 (50%), Positives = 212/315 (67%), Gaps = 15/315 (4%) Query: 18 YLKLQGIRKRFGDVPVLAGVDLNIGEGELVTLLGPSGCGKSTLLRCIAGLTELDSGSILL 77 ++ +Q ++K + PV + ++ I +GE VTLLGPSGCGKSTLLRCIAGLT +DSG ILL Sbjct: 3 FVSVQHLQKGYAGTPVFSDINCEIAKGEFVTLLGPSGCGKSTLLRCIAGLTSVDSGQILL 62 Query: 78 ADKELTKLPPRSRDVGMVFQSYALFPNLTVRQNVEYGMRMRGVAPAARRSRCEELLALVD 137 +++ L P+ R +GMVFQSYALFPN+TV QNV +G+RM+ V R +E+L LV+ Sbjct: 63 DGQDIVPLSPQKRHIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSHKRVQEVLQLVE 122 Query: 138 LEDKRDVYPQSLSGGQQQRVALARSLAVQPKXXXXXXXXXXXXXKIRKNLRAEIRDIQRR 197 L+D YP +SGGQ QRVALARSL +P+ +IRK+LR +IR IQR Sbjct: 123 LKDLAGRYPHQMSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQRE 182 Query: 198 LGMTTLFVTHDQEEALILSDRICIMNQGRMVQEGSPEQLYTAPRTEFAARFMGSYNVFNR 257 LG+TT+FVTHDQEEAL +SDRI +MNQG++VQ G E LYTAP FAA F+G+YN+ + Sbjct: 183 LGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLLDA 242 Query: 258 AEALKLFRR-IDSRSDRFAIRPEAVTLLAEGEAIQDDADGMMDVRGQVQAVSILGNIIRA 316 +A +L +R I+S R AIRPEA+ L GE + V++ S+LGN+IR Sbjct: 243 DKATQLLQRPINS---RIAIRPEAIELSRNGE-----------LDALVRSHSLLGNVIRY 288 Query: 317 AVVAEGVHLTVDLLN 331 + A GV L VD+LN Sbjct: 289 RIEARGVELVVDVLN 303 >Q4K8F0.1 Q4K8F0_PSEF5 ABC transporter, ATP-binding protein Length = 329 Score = 305 bits (780), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 162/314 (51%), Positives = 207/314 (65%), Gaps = 13/314 (4%) Query: 18 YLKLQGIRKRFGDVPVLAGVDLNIGEGELVTLLGPSGCGKSTLLRCIAGLTELDSGSILL 77 ++ +Q ++K + V + ++ I +GE VTLLGPSGCGKSTLLRCIAGLT +D G ILL Sbjct: 3 FVSVQHLQKNYAGTTVFSDINCEIRKGEFVTLLGPSGCGKSTLLRCIAGLTPVDGGKILL 62 Query: 78 ADKELTKLPPRSRDVGMVFQSYALFPNLTVRQNVEYGMRMRGVAPAARRSRCEELLALVD 137 +++ L P+ R +GMVFQSYALFPN+TV QNV +G+RM+ V R R +E L LV+ Sbjct: 63 DGQDIVPLSPQKRGIGMVFQSYALFPNMTVEQNVAFGLRMQKVGAEDSRKRVQEALQLVE 122 Query: 138 LEDKRDVYPQSLSGGQQQRVALARSLAVQPKXXXXXXXXXXXXXKIRKNLRAEIRDIQRR 197 L D YP LSGGQ QRVALARSL +P+ +IRK+LR +IR+IQR Sbjct: 123 LNDFASRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRNIQRE 182 Query: 198 LGMTTLFVTHDQEEALILSDRICIMNQGRMVQEGSPEQLYTAPRTEFAARFMGSYNVFNR 257 LG+TT+FVTHDQEEAL +SDRI +MNQGR+VQ G E LYTAP FAA F+G+YN+ + Sbjct: 183 LGLTTIFVTHDQEEALTMSDRIFLMNQGRIVQSGDAETLYTAPVDAFAAGFIGNYNLLDA 242 Query: 258 AEALKLFRRIDSRSDRFAIRPEAVTLLAEGEAIQDDADGMMDVRGQVQAVSILGNIIRAA 317 A KL +R S R AIRPEA+ L EG + V++ S+LGN+IR Sbjct: 243 DSASKLLQR--PVSGRIAIRPEAIELRKEGP-----------LDALVRSHSLLGNVIRYR 289 Query: 318 VVAEGVHLTVDLLN 331 V A GV L VD+LN Sbjct: 290 VEARGVELVVDVLN 303 >Q4ZW22.1 Q4ZW22_PSEU2 ABC transporter Length = 329 Score = 304 bits (779), Expect = 8e-81, Method: Compositional matrix adjust. Identities = 163/329 (49%), Positives = 217/329 (65%), Gaps = 15/329 (4%) Query: 18 YLKLQGIRKRFGDVPVLAGVDLNIGEGELVTLLGPSGCGKSTLLRCIAGLTELDSGSILL 77 ++ ++ ++K + V + ++ +I +GE VTLLGPSGCGKSTLLRCIAGLT ++SG ILL Sbjct: 3 FVSIENLQKSYASTSVFSDINCSIAKGEFVTLLGPSGCGKSTLLRCIAGLTPVNSGRILL 62 Query: 78 ADKELTKLPPRSRDVGMVFQSYALFPNLTVRQNVEYGMRMRGVAPAARRSRCEELLALVD 137 +L L P+ R++GMVFQSYALFPN+TV QNV +G+R++ V+ R E+L +V+ Sbjct: 63 DGSDLVPLTPQKRNIGMVFQSYALFPNMTVEQNVAFGLRIQKVSADESTRRVAEILRMVE 122 Query: 138 LEDKRDVYPQSLSGGQQQRVALARSLAVQPKXXXXXXXXXXXXXKIRKNLRAEIRDIQRR 197 L D YP LSGGQ QRVALARSL +P+ +IRKNLR +IR IQR Sbjct: 123 LHDFATRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKNLREQIRAIQRE 182 Query: 198 LGMTTLFVTHDQEEALILSDRICIMNQGRMVQEGSPEQLYTAPRTEFAARFMGSYNVFNR 257 LG+TT+FVTHDQEEAL +SDRI +MNQGR+VQ G E LYTAP FAA F+G+YN+ Sbjct: 183 LGLTTIFVTHDQEEALTMSDRIFLMNQGRIVQSGDAETLYTAPVDVFAAGFIGNYNLLEA 242 Query: 258 AEALKLFRR-IDSRSDRFAIRPEAVTLLAEGEAIQDDADGMMDVRGQVQAVSILGNIIRA 316 +A +L +R I+S R AIRPE++ L GE + G++++ S+LGN+IR Sbjct: 243 DDATRLMQRPINS---RVAIRPESIQLSLTGE-----------LEGEIRSHSLLGNVIRY 288 Query: 317 AVVAEGVHLTVDLLNDGRWLRVREGDRVT 345 V A GV L VD+LN +G RVT Sbjct: 289 RVQARGVKLVVDVLNRSADDLHPDGRRVT 317 >Q48L87.1 Q48L87_PSE14 Polyamine ABC transporter, ATP-binding protein, putative Length = 329 Score = 304 bits (778), Expect = 9e-81, Method: Compositional matrix adjust. Identities = 160/328 (48%), Positives = 216/328 (65%), Gaps = 13/328 (3%) Query: 18 YLKLQGIRKRFGDVPVLAGVDLNIGEGELVTLLGPSGCGKSTLLRCIAGLTELDSGSILL 77 ++ ++ ++K + V + ++ +I +GE VTLLGPSGCGKSTLLRCIAGLT ++SG ILL Sbjct: 3 FVSIENLQKSYASTSVFSDINCSITKGEFVTLLGPSGCGKSTLLRCIAGLTPVNSGRILL 62 Query: 78 ADKELTKLPPRSRDVGMVFQSYALFPNLTVRQNVEYGMRMRGVAPAARRSRCEELLALVD 137 +L L P+ R++GMVFQSYALFPN+TV QNV +G+R++ V+ A R ++L +V+ Sbjct: 63 DGTDLVPLTPQKRNIGMVFQSYALFPNMTVEQNVAFGLRIQKVSAADSEKRVADILRMVE 122 Query: 138 LEDKRDVYPQSLSGGQQQRVALARSLAVQPKXXXXXXXXXXXXXKIRKNLRAEIRDIQRR 197 L D YP LSGGQ QRVALARSL +P+ +IRKNLR +IR IQR Sbjct: 123 LHDFATRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKNLREQIRAIQRE 182 Query: 198 LGMTTLFVTHDQEEALILSDRICIMNQGRMVQEGSPEQLYTAPRTEFAARFMGSYNVFNR 257 LG+TT+FVTHDQEEAL +SDRI +MN+GR+VQ G E LYTAP FAA F+G+YN+ Sbjct: 183 LGLTTIFVTHDQEEALTMSDRIFLMNEGRIVQSGDAETLYTAPVDVFAAGFIGNYNLLEA 242 Query: 258 AEALKLFRRIDSRSDRFAIRPEAVTLLAEGEAIQDDADGMMDVRGQVQAVSILGNIIRAA 317 +A +L +R + R AIRPE++ L GE + G+V++ S+LGN+IR Sbjct: 243 EDATRLMQR--PITSRIAIRPESIQLSLTGE-----------LEGEVRSHSLLGNVIRYR 289 Query: 318 VVAEGVHLTVDLLNDGRWLRVREGDRVT 345 + A GV L VD+LN +G RVT Sbjct: 290 IQARGVELVVDVLNRSADDLHPDGRRVT 317 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,834,352,871 Number of extensions: 70417386 Number of successful extensions: 533633 Number of sequences better than 1.0e-05: 87425 Number of HSP's gapped: 400892 Number of HSP's successfully gapped: 93049 Length of query: 361 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 224 Effective length of database: 1,770,017,148 Effective search space: 396483841152 Effective search space used: 396483841152 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)