BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0062.p (486 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2S571.1 C2S571_BACCE Putative uncharacterized protein 769 0.0 B9J4C9.1 B9J4C9_BACCQ Putative uncharacterized protein 769 0.0 B7HVP0.1 B7HVP0_BACC7 Putative uncharacterized protein 769 0.0 B5V1Y0.1 B5V1Y0_BACCE Putative uncharacterized protein 769 0.0 Q735T8.1 Q735T8_BACC1 Putative uncharacterized protein 769 0.0 >C2S571.1 C2S571_BACCE Putative uncharacterized protein Length = 484 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/473 (74%), Positives = 410/473 (86%), Gaps = 2/473 (0%) Query: 3 MGHSTVYPTGATVYNPAKAWSGYTVFQAGDEGVVLIDMSGKEVHLWQGLIGFPAKILPGG 62 MGH T+YPTGATVYNP KAWSGYT++QA D G +LIDM+GKEVHLW+GL GFP K+LPGG Sbjct: 4 MGHPTIYPTGATVYNPGKAWSGYTIYQAADHGALLIDMNGKEVHLWKGLRGFPNKLLPGG 63 Query: 63 YVLGSTGRRDPKFGIQDNVDLVEVDWDGNVVWKYNSYEHIEDPGYEPLWYARQHHDYQRE 122 YV G T +RDP++G QD VDLV+VDW+GN+VW++N EHIEDPG++P W AR HHDYQRE Sbjct: 64 YVFGHTAQRDPEYGFQDEVDLVQVDWEGNIVWRFNRLEHIEDPGHDPQWMARAHHDYQRE 123 Query: 123 GNPVGYYAPGLEPSANSGKTLILAHKNLHNPQISDKQLLDDTIIEVDWEGKMVWEWAASD 182 GNPVGYYAP LEP + G TLILAHKN+HNP ISDK LLDD IIEVDWEG ++WEWA SD Sbjct: 124 GNPVGYYAPELEPKTDGGNTLILAHKNVHNPNISDKPLLDDVIIEVDWEGNIIWEWAVSD 183 Query: 183 HFDELGFDEAARNVLFRDPNTRSFGDLGGGVGDWLHINSASYVGPNKFYDQGDERFHPDN 242 HF+ELGFDE+A+NVLFR+PN RSFG G GDW+HINS S +GPNKFYDQGDERFHP+N Sbjct: 184 HFEELGFDESAKNVLFRNPNIRSFG--GNSDGDWMHINSMSTIGPNKFYDQGDERFHPEN 241 Query: 243 IIWDAREANIIAITDKRTGAIVWRLGPDYSLPEVQHIGWIIGQHHAHIIPKGLPGEGNLL 302 IIWDARE+NIIAI DK+TG IVW+LGPDYS P+V+H+GWIIGQHHAHIIPKGLPGEGNLL Sbjct: 242 IIWDARESNIIAIIDKKTGNIVWKLGPDYSSPDVKHLGWIIGQHHAHIIPKGLPGEGNLL 301 Query: 303 VFDNGGWGGYGLPNPSSPFGQKNALRDHSRVLEINPVTLEIEWQYTSAEAGFSVPTDSYK 362 VFDNGGW GYGLPNP+SP+G KNA+RDHSR+LEINPVTLEIEWQYTS EAG+ P DSY+ Sbjct: 302 VFDNGGWAGYGLPNPASPYGSKNAVRDHSRILEINPVTLEIEWQYTSTEAGYQAPLDSYR 361 Query: 363 FYSPYISSAQRLPNGNTLITEGSNGRLFEVTAEHELVWEYISPYTDRRNTNMVYRSYRVP 422 FYSPYISSAQRLPNGNTLITEG++GR+FEVT EHELVWEYISPY + RN+NMVYR+YRVP Sbjct: 362 FYSPYISSAQRLPNGNTLITEGADGRIFEVTREHELVWEYISPYKNNRNSNMVYRAYRVP 421 Query: 423 YAWVPQLAKPQETAIEPIDVSTFRVPGAAPKGSDSIVSVATTLPFMEGAACVA 475 Y WVPQL KP+E I P+D++ FRVP AA G++S+V+V T+ + G CVA Sbjct: 422 YEWVPQLEKPEEKEITPLDIAAFRVPNAAEAGTESVVTVEGTISYGTGDFCVA 474 >B9J4C9.1 B9J4C9_BACCQ Putative uncharacterized protein Length = 481 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/473 (74%), Positives = 410/473 (86%), Gaps = 2/473 (0%) Query: 3 MGHSTVYPTGATVYNPAKAWSGYTVFQAGDEGVVLIDMSGKEVHLWQGLIGFPAKILPGG 62 MGH T+YPTGATVYNP KAWSGYT++QA D G +LIDM+GKEVHLW+GL GFP K+LPGG Sbjct: 1 MGHPTIYPTGATVYNPGKAWSGYTIYQAADHGALLIDMNGKEVHLWKGLRGFPNKLLPGG 60 Query: 63 YVLGSTGRRDPKFGIQDNVDLVEVDWDGNVVWKYNSYEHIEDPGYEPLWYARQHHDYQRE 122 YV G T +RDP++G QD VDLV+VDW+GN+VW++N EHIEDPG++P W AR HHDYQRE Sbjct: 61 YVFGHTAQRDPEYGFQDEVDLVQVDWEGNIVWRFNRLEHIEDPGHDPQWMARAHHDYQRE 120 Query: 123 GNPVGYYAPGLEPSANSGKTLILAHKNLHNPQISDKQLLDDTIIEVDWEGKMVWEWAASD 182 GNPVGYYAP LEP + G TLILAHKN+HNP ISDK LLDD IIEVDWEG ++WEWA SD Sbjct: 121 GNPVGYYAPELEPKTDGGNTLILAHKNVHNPNISDKPLLDDVIIEVDWEGNIIWEWAVSD 180 Query: 183 HFDELGFDEAARNVLFRDPNTRSFGDLGGGVGDWLHINSASYVGPNKFYDQGDERFHPDN 242 HF+ELGFDE+A+NVLFR+PN RSFG G GDW+HINS S +GPNKFYDQGDERFHP+N Sbjct: 181 HFEELGFDESAKNVLFRNPNIRSFG--GNSDGDWMHINSMSTIGPNKFYDQGDERFHPEN 238 Query: 243 IIWDAREANIIAITDKRTGAIVWRLGPDYSLPEVQHIGWIIGQHHAHIIPKGLPGEGNLL 302 IIWDARE+NIIAI DK+TG IVW+LGPDYS P+V+H+GWIIGQHHAHIIPKGLPGEGNLL Sbjct: 239 IIWDARESNIIAIIDKKTGNIVWKLGPDYSSPDVKHLGWIIGQHHAHIIPKGLPGEGNLL 298 Query: 303 VFDNGGWGGYGLPNPSSPFGQKNALRDHSRVLEINPVTLEIEWQYTSAEAGFSVPTDSYK 362 VFDNGGW GYGLPNP+SP+G KNA+RDHSR+LEINPVTLEIEWQYTS EAG+ P DSY+ Sbjct: 299 VFDNGGWAGYGLPNPASPYGSKNAVRDHSRILEINPVTLEIEWQYTSTEAGYQAPLDSYR 358 Query: 363 FYSPYISSAQRLPNGNTLITEGSNGRLFEVTAEHELVWEYISPYTDRRNTNMVYRSYRVP 422 FYSPYISSAQRLPNGNTLITEG++GR+FEVT EHELVWEYISPY + RN+NMVYR+YRVP Sbjct: 359 FYSPYISSAQRLPNGNTLITEGADGRIFEVTREHELVWEYISPYKNNRNSNMVYRAYRVP 418 Query: 423 YAWVPQLAKPQETAIEPIDVSTFRVPGAAPKGSDSIVSVATTLPFMEGAACVA 475 Y WVPQL KP+E I P+D++ FRVP AA G++S+V+V T+ + G CVA Sbjct: 419 YEWVPQLEKPEEKEITPLDIAAFRVPNAAEAGTESVVTVEGTISYGTGDFCVA 471 >B7HVP0.1 B7HVP0_BACC7 Putative uncharacterized protein Length = 481 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/473 (74%), Positives = 410/473 (86%), Gaps = 2/473 (0%) Query: 3 MGHSTVYPTGATVYNPAKAWSGYTVFQAGDEGVVLIDMSGKEVHLWQGLIGFPAKILPGG 62 MGH T+YPTGATVYNP KAWSGYT++QA D G +LIDM+GKEVHLW+GL GFP K+LPGG Sbjct: 1 MGHPTIYPTGATVYNPGKAWSGYTIYQAADHGALLIDMNGKEVHLWKGLRGFPNKLLPGG 60 Query: 63 YVLGSTGRRDPKFGIQDNVDLVEVDWDGNVVWKYNSYEHIEDPGYEPLWYARQHHDYQRE 122 YV G T +RDP++G QD VDLV+VDW+GN+VW++N EHIEDPG++P W AR HHDYQRE Sbjct: 61 YVFGHTAQRDPEYGFQDEVDLVQVDWEGNIVWRFNRLEHIEDPGHDPQWMARAHHDYQRE 120 Query: 123 GNPVGYYAPGLEPSANSGKTLILAHKNLHNPQISDKQLLDDTIIEVDWEGKMVWEWAASD 182 GNPVGYYAP LEP + G TLILAHKN+HNP ISDK LLDD IIEVDWEG ++WEWA SD Sbjct: 121 GNPVGYYAPELEPKTDGGNTLILAHKNVHNPNISDKPLLDDVIIEVDWEGNIIWEWAVSD 180 Query: 183 HFDELGFDEAARNVLFRDPNTRSFGDLGGGVGDWLHINSASYVGPNKFYDQGDERFHPDN 242 HF+ELGFDE+A+NVLFR+PN RSFG G GDW+HINS S +GPNKFYDQGDERFHP+N Sbjct: 181 HFEELGFDESAKNVLFRNPNIRSFG--GNSDGDWMHINSMSTIGPNKFYDQGDERFHPEN 238 Query: 243 IIWDAREANIIAITDKRTGAIVWRLGPDYSLPEVQHIGWIIGQHHAHIIPKGLPGEGNLL 302 IIWDARE+NIIAI DK+TG IVW+LGPDYS P+V+H+GWIIGQHHAHIIPKGLPGEGNLL Sbjct: 239 IIWDARESNIIAIIDKKTGNIVWKLGPDYSSPDVKHLGWIIGQHHAHIIPKGLPGEGNLL 298 Query: 303 VFDNGGWGGYGLPNPSSPFGQKNALRDHSRVLEINPVTLEIEWQYTSAEAGFSVPTDSYK 362 VFDNGGW GYGLPNP+SP+G KNA+RDHSR+LEINPVTLEIEWQYTS EAG+ P DSY+ Sbjct: 299 VFDNGGWAGYGLPNPASPYGSKNAVRDHSRILEINPVTLEIEWQYTSTEAGYQAPLDSYR 358 Query: 363 FYSPYISSAQRLPNGNTLITEGSNGRLFEVTAEHELVWEYISPYTDRRNTNMVYRSYRVP 422 FYSPYISSAQRLPNGNTLITEG++GR+FEVT EHELVWEYISPY + RN+NMVYR+YRVP Sbjct: 359 FYSPYISSAQRLPNGNTLITEGADGRIFEVTREHELVWEYISPYKNNRNSNMVYRAYRVP 418 Query: 423 YAWVPQLAKPQETAIEPIDVSTFRVPGAAPKGSDSIVSVATTLPFMEGAACVA 475 Y WVPQL KP+E I P+D++ FRVP AA G++S+V+V T+ + G CVA Sbjct: 419 YEWVPQLEKPEEKEITPLDIAAFRVPNAAEAGTESVVTVEGTISYGTGDFCVA 471 >B5V1Y0.1 B5V1Y0_BACCE Putative uncharacterized protein Length = 481 Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust. Identities = 354/473 (74%), Positives = 410/473 (86%), Gaps = 2/473 (0%) Query: 3 MGHSTVYPTGATVYNPAKAWSGYTVFQAGDEGVVLIDMSGKEVHLWQGLIGFPAKILPGG 62 MGH T+YPTGATVYNP KAWSGYT++QA D G +LIDM+GKEVHLW+GL GFP K+LPGG Sbjct: 1 MGHPTIYPTGATVYNPGKAWSGYTIYQAADHGALLIDMNGKEVHLWKGLRGFPNKLLPGG 60 Query: 63 YVLGSTGRRDPKFGIQDNVDLVEVDWDGNVVWKYNSYEHIEDPGYEPLWYARQHHDYQRE 122 YV G T +RDP++G QD VDLV+VDW+GN+VW++N EHIEDPG++P W AR HHDYQRE Sbjct: 61 YVFGHTAQRDPEYGFQDEVDLVQVDWEGNIVWRFNRLEHIEDPGHDPQWMARAHHDYQRE 120 Query: 123 GNPVGYYAPGLEPSANSGKTLILAHKNLHNPQISDKQLLDDTIIEVDWEGKMVWEWAASD 182 GNPVGYYAP LEP + G TLILAHKN+HNP ISDK LLDD IIEVDWEG ++WEWA SD Sbjct: 121 GNPVGYYAPELEPKTDGGNTLILAHKNVHNPNISDKPLLDDVIIEVDWEGNIIWEWAVSD 180 Query: 183 HFDELGFDEAARNVLFRDPNTRSFGDLGGGVGDWLHINSASYVGPNKFYDQGDERFHPDN 242 HF+ELGFDE+A+NVLFR+PN RSFG G GDW+HINS S +GPNKFYDQGDERFHP+N Sbjct: 181 HFEELGFDESAKNVLFRNPNIRSFG--GNSDGDWMHINSMSTIGPNKFYDQGDERFHPEN 238 Query: 243 IIWDAREANIIAITDKRTGAIVWRLGPDYSLPEVQHIGWIIGQHHAHIIPKGLPGEGNLL 302 IIWDARE+NIIAI DK+TG IVW+LGPDYS P+V+H+GWIIGQHHAHIIPKGLPGEGNLL Sbjct: 239 IIWDARESNIIAIIDKKTGNIVWKLGPDYSSPDVKHLGWIIGQHHAHIIPKGLPGEGNLL 298 Query: 303 VFDNGGWGGYGLPNPSSPFGQKNALRDHSRVLEINPVTLEIEWQYTSAEAGFSVPTDSYK 362 VFDNGGW GYGLPNP+SP+G KNA+RDHSR+LEINPVTLEIEWQYTS EAG+ P DSY+ Sbjct: 299 VFDNGGWAGYGLPNPASPYGSKNAVRDHSRILEINPVTLEIEWQYTSTEAGYQAPLDSYR 358 Query: 363 FYSPYISSAQRLPNGNTLITEGSNGRLFEVTAEHELVWEYISPYTDRRNTNMVYRSYRVP 422 FYSPYISSAQRLPNGNTLITEG++GR+FEVT EHELVWEYISPY + RN+NMVYR+YRVP Sbjct: 359 FYSPYISSAQRLPNGNTLITEGADGRIFEVTREHELVWEYISPYKNNRNSNMVYRAYRVP 418 Query: 423 YAWVPQLAKPQETAIEPIDVSTFRVPGAAPKGSDSIVSVATTLPFMEGAACVA 475 Y WVPQL KP+E I P+D++ FRVP AA G++S+V+V T+ + G CVA Sbjct: 419 YEWVPQLEKPEEKEITPLDIAAFRVPNAAEAGTESVVTVEGTISYGTGDFCVA 471 >Q735T8.1 Q735T8_BACC1 Putative uncharacterized protein Length = 481 Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/473 (75%), Positives = 408/473 (86%), Gaps = 2/473 (0%) Query: 3 MGHSTVYPTGATVYNPAKAWSGYTVFQAGDEGVVLIDMSGKEVHLWQGLIGFPAKILPGG 62 MGH T+YPTGATVYNP KAWSGYT++QA D G +LIDM+GKEVHLW+GL GFP K+LPGG Sbjct: 1 MGHPTIYPTGATVYNPGKAWSGYTIYQAADHGALLIDMNGKEVHLWKGLRGFPNKVLPGG 60 Query: 63 YVLGSTGRRDPKFGIQDNVDLVEVDWDGNVVWKYNSYEHIEDPGYEPLWYARQHHDYQRE 122 YV G T +RDP+FG QD VDLV+VDW+GN+VWK+N EHIEDPG+ W AR HHDYQRE Sbjct: 61 YVFGHTAQRDPEFGFQDEVDLVQVDWEGNIVWKFNRLEHIEDPGHASQWMARAHHDYQRE 120 Query: 123 GNPVGYYAPGLEPSANSGKTLILAHKNLHNPQISDKQLLDDTIIEVDWEGKMVWEWAASD 182 GNPVGYYAPGLEP SG TLILAHKN+HNP ISDK LLDD IIEVDW+G ++WEWA SD Sbjct: 121 GNPVGYYAPGLEPKTESGNTLILAHKNVHNPNISDKPLLDDVIIEVDWKGNIIWEWAVSD 180 Query: 183 HFDELGFDEAARNVLFRDPNTRSFGDLGGGVGDWLHINSASYVGPNKFYDQGDERFHPDN 242 HF+ELGFDE+A+NVLFR+PN RSFG G GDW+HINS S +GPNKFYDQGDERFHP+N Sbjct: 181 HFEELGFDESAKNVLFRNPNIRSFG--GNSDGDWMHINSMSTIGPNKFYDQGDERFHPEN 238 Query: 243 IIWDAREANIIAITDKRTGAIVWRLGPDYSLPEVQHIGWIIGQHHAHIIPKGLPGEGNLL 302 IIWDARE+NIIAI DK+TG IVW+LGPDYS P+V+H+GWIIGQHHAHIIPKGLPGEGNLL Sbjct: 239 IIWDARESNIIAIIDKKTGNIVWKLGPDYSSPDVKHLGWIIGQHHAHIIPKGLPGEGNLL 298 Query: 303 VFDNGGWGGYGLPNPSSPFGQKNALRDHSRVLEINPVTLEIEWQYTSAEAGFSVPTDSYK 362 VFDNGGW GYGLPNP+SP+G KNA+RDHSR+LEINPVTLEIEWQYT EAG+ P DSY+ Sbjct: 299 VFDNGGWAGYGLPNPASPYGSKNAVRDHSRILEINPVTLEIEWQYTPTEAGYQAPLDSYR 358 Query: 363 FYSPYISSAQRLPNGNTLITEGSNGRLFEVTAEHELVWEYISPYTDRRNTNMVYRSYRVP 422 FYSPYISSAQRLPNGNTLITEG++GR+FEVT EHELVWEYISPY + RN+NMVYR+YRVP Sbjct: 359 FYSPYISSAQRLPNGNTLITEGADGRIFEVTREHELVWEYISPYKNNRNSNMVYRAYRVP 418 Query: 423 YAWVPQLAKPQETAIEPIDVSTFRVPGAAPKGSDSIVSVATTLPFMEGAACVA 475 Y WVPQL KP+E I P+D++ FRVP AA G++S+V+V T+ + G CVA Sbjct: 419 YEWVPQLEKPEEKEIIPLDIAAFRVPNAAEAGTESVVTVEGTISYGTGDFCVA 471 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.137 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,477,162,065 Number of extensions: 168520600 Number of successful extensions: 347966 Number of sequences better than 1.0e-05: 118 Number of HSP's gapped: 347476 Number of HSP's successfully gapped: 152 Length of query: 486 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 346 Effective length of database: 1,741,754,103 Effective search space: 602646919638 Effective search space used: 602646919638 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)