BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0044.p (608 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGX0.1 B3KGX0_9BACI Putative uncharacterized protein 309 5e-82 B8FUW3.1 B8FUW3_DESHD Putative uncharacterized protein 304 1e-80 Q250B2.1 Q250B2_DESHY Putative uncharacterized protein 304 2e-80 B7GKZ2.1 B7GKZ2_ANOFW Glycosyl/glycerophosphate transferase invo... 293 3e-77 C0Z9Q5.1 C0Z9Q5_BREBN Putative uncharacterized protein 291 2e-76 >B3KGX0.1 B3KGX0_9BACI Putative uncharacterized protein Length = 535 Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 142/233 (60%), Positives = 174/233 (74%) Query: 376 SPRPKLTLTMVAKNEGQRFLRQVLQMHRKYIDEAVIIDDGSTDDTADICREVLQGIPLRL 435 + RP LTLTMV KNEGQR+LRQ L+ HR YID+AVIIDD STD+T D+C EVL+GIPLRL Sbjct: 303 TARPSLTLTMVLKNEGQRYLRQALERHRDYIDQAVIIDDASTDNTLDVCMEVLKGIPLRL 362 Query: 436 VRNSVSKFSNEAELRRQQWEEVVKSDPEWILNLDADEIFEDRFASDIDSLLREESCDLFC 495 + N S F NE ELR+QQW E + PEWILNLDADE FE F +++ S+L++ DL+C Sbjct: 363 ISNEASLFHNEVELRKQQWRETLNLHPEWILNLDADEWFESSFTAELPSMLKQNEFDLYC 422 Query: 496 FRLYDFWDDRHYREDEYWRSHLRYRPFLLRYREDFNFAWNDLPQHCGRLPENIFELPHLL 555 FRLYDFW++ HYR+DE W SH YRPFLLRYR + + W + QHCGR P N+F+LPH L Sbjct: 423 FRLYDFWNETHYRDDECWSSHRTYRPFLLRYRPEMKYCWKETAQHCGRFPANVFDLPHHL 482 Query: 556 SNLRLKHLGWSKAEYRLDKYLRYMLHDPDGQYGWKEQYMSILDPHPNLVPWTE 608 S +RLKH GW+K EYRL+K RY DP+ ++G KEQY SIL+ P LV W E Sbjct: 483 SAIRLKHYGWAKPEYRLEKLKRYRQLDPEAEFGSKEQYDSILEESPTLVEWME 535 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 138/278 (49%), Positives = 188/278 (67%), Gaps = 4/278 (1%) Query: 2 SESKKRVLIGSPIHQKPQILQEFLDSXXXXXXXXXXXNFYLIDDNDEEESSRLLGTFAAG 61 ++ ++RVLIGSP+ QKP+IL FL S ++ IDDN++E SS L F Sbjct: 3 TQGRRRVLIGSPVRQKPEILDHFLTSLLRLEQNSLELCYFFIDDNNDELSSARLSRFMKE 62 Query: 62 GNEVFLQSSGLHD--AYIRNDITHFWNSNLVWKVAGFKNLMIRRAEAFGYDYLFLIDSDL 119 N V + S+ D YIR++ TH+WN L+WKVA +KN +I+ A +DYLFL+DSDL Sbjct: 63 VNRVVIHSAHTPDDHEYIRDETTHYWNDRLIWKVADYKNKIIQYALDLRFDYLFLVDSDL 122 Query: 120 VLHPDTLLHLIGTGRDIVSEVFWTQWQPGTILQPQVWMHDEYNQWDAEPGEQLSQEEINR 179 +L P TL+HLI T ++I+SE+FWT+WQP + PQVW+ DEY Q++ + GE L + + Sbjct: 123 LLAPQTLIHLIATDKEIISEIFWTRWQPDSRPHPQVWLKDEYTQYEQQAGETLDEAQKEH 182 Query: 180 RFHAFLAKLQVPGIYEVGGLGACTLISSRAIASGASYDRIRNISYWGEDRHFCIRAAALG 239 R+ F+++L G+YEVGGLGACTLIS RA+ G ++ I N+S+WGEDRHF IRAAALG Sbjct: 183 RYQQFVSRLAEAGVYEVGGLGACTLISRRALVRGVNFKPIYNLSFWGEDRHFSIRAAALG 242 Query: 240 IPLYVDTHYPALHLYRDSDLDKVADFIRLT--TAAEPE 275 LYVDTHYPA H+YR+SDL F++ T T + PE Sbjct: 243 FTLYVDTHYPAYHIYRESDLHHAGLFLKATDKTTSIPE 280 >B8FUW3.1 B8FUW3_DESHD Putative uncharacterized protein Length = 518 Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 138/231 (59%), Positives = 178/231 (77%) Query: 378 RPKLTLTMVAKNEGQRFLRQVLQMHRKYIDEAVIIDDGSTDDTADICREVLQGIPLRLVR 437 +PKLTL+MV KNE + L +VL+ HR YID AVIIDDGSTD++ ++C +LQGIPL+++ Sbjct: 288 KPKLTLSMVMKNEATKDLARVLREHRHYIDAAVIIDDGSTDNSVELCLSILQGIPLQIIE 347 Query: 438 NSVSKFSNEAELRRQQWEEVVKSDPEWILNLDADEIFEDRFASDIDSLLREESCDLFCFR 497 NS SKF+NE ELR+QQW ++PEWILNLDADE+FE+RF ++ L+ + D++ FR Sbjct: 348 NSASKFANEVELRKQQWRATAATNPEWILNLDADEVFENRFRQEVRMLIEDPDTDVWYFR 407 Query: 498 LYDFWDDRHYREDEYWRSHLRYRPFLLRYREDFNFAWNDLPQHCGRLPENIFELPHLLSN 557 LYDFWD+ HYREDEYW +H YRPFLLRYR F WN++ QHCGR P++I LP+ LS+ Sbjct: 408 LYDFWDESHYREDEYWNAHSTYRPFLLRYRPGFVAEWNEVAQHCGRFPKSIKTLPYKLSS 467 Query: 558 LRLKHLGWSKAEYRLDKYLRYMLHDPDGQYGWKEQYMSILDPHPNLVPWTE 608 LRLKHLGW+ ++R+ KY RYM DP+ +YGWKEQY SILDP+P LV W E Sbjct: 468 LRLKHLGWADPKHRMAKYQRYMELDPEARYGWKEQYESILDPNPRLVKWEE 518 Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 138/273 (50%), Positives = 190/273 (69%), Gaps = 3/273 (1%) Query: 5 KKRVLIGSPIHQKPQILQEFLDSXXXXXXXXXXXNFYLIDDNDEEESSRLLGTFAAGGNE 64 KKRVLIGSPI Q P +L+EFLDS N+ +DDN+ EESSRLL F G Sbjct: 3 KKRVLIGSPIRQSPHVLKEFLDSLRGLEQGELELNYIFVDDNESEESSRLLVNFEEEGLV 62 Query: 65 VFLQSSGLHDA---YIRNDITHFWNSNLVWKVAGFKNLMIRRAEAFGYDYLFLIDSDLVL 121 ++ Y+ +DITH W +L+ KVAG+KNLMI +A +GYDYLFL+DSDLVL Sbjct: 63 TLIKGDKGEKRPGDYVCDDITHHWRDHLIQKVAGYKNLMIEKALEWGYDYLFLVDSDLVL 122 Query: 122 HPDTLLHLIGTGRDIVSEVFWTQWQPGTILQPQVWMHDEYNQWDAEPGEQLSQEEINRRF 181 HP TL HL+ TG++I+SE+FWT W PG+ P VW++D Y+ + GE+LSQ++++ R Sbjct: 123 HPATLRHLVSTGKEIISEIFWTAWYPGSREMPNVWLYDHYDMSPRQRGEKLSQKDLDIRA 182 Query: 182 HAFLAKLQVPGIYEVGGLGACTLISSRAIASGASYDRIRNISYWGEDRHFCIRAAALGIP 241 F+ +L++PG+YEVGGLGACTL+S +A+ +G S+ I+N++ WGEDRHFC+RA ALG+ Sbjct: 183 QGFIDQLRIPGVYEVGGLGACTLLSRQALQAGISFSEIKNLTLWGEDRHFCVRANALGLS 242 Query: 242 LYVDTHYPALHLYRDSDLDKVADFIRLTTAAEP 274 L+VDTHYPA H+YR+S + V +F + +P Sbjct: 243 LWVDTHYPAYHIYRESSMAGVEEFKAVCRGEKP 275 >Q250B2.1 Q250B2_DESHY Putative uncharacterized protein Length = 518 Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 138/231 (59%), Positives = 179/231 (77%) Query: 378 RPKLTLTMVAKNEGQRFLRQVLQMHRKYIDEAVIIDDGSTDDTADICREVLQGIPLRLVR 437 +PKLTL+MV KNE + L +VL+ HR YID AVIIDDGSTD++ ++C +LQGIPL+++ Sbjct: 288 KPKLTLSMVMKNEATKDLARVLREHRHYIDAAVIIDDGSTDNSVELCLSILQGIPLQIIE 347 Query: 438 NSVSKFSNEAELRRQQWEEVVKSDPEWILNLDADEIFEDRFASDIDSLLREESCDLFCFR 497 NS SKF+NE ELR+QQW V ++PEWILNLDADE+FE+RF ++ L+ + D++ FR Sbjct: 348 NSASKFANEVELRKQQWRATVATNPEWILNLDADEVFENRFRQEVRMLIEDPDTDVWYFR 407 Query: 498 LYDFWDDRHYREDEYWRSHLRYRPFLLRYREDFNFAWNDLPQHCGRLPENIFELPHLLSN 557 LYDFWD+ HYREDEYW +H YRPFLLRYR F W+++ QHCGR P++I LP+ LS+ Sbjct: 408 LYDFWDESHYREDEYWNAHSTYRPFLLRYRPGFVAEWHEVAQHCGRFPKSIKTLPYKLSS 467 Query: 558 LRLKHLGWSKAEYRLDKYLRYMLHDPDGQYGWKEQYMSILDPHPNLVPWTE 608 LRLKHLGW+ ++R+ KY RYM DP+ +YGWKEQY SILDP+P LV W E Sbjct: 468 LRLKHLGWADPKHRMAKYQRYMELDPEARYGWKEQYESILDPNPRLVKWEE 518 Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 138/273 (50%), Positives = 190/273 (69%), Gaps = 3/273 (1%) Query: 5 KKRVLIGSPIHQKPQILQEFLDSXXXXXXXXXXXNFYLIDDNDEEESSRLLGTFAAGGNE 64 KKRVLIGSPI Q P +L+EFLDS N+ +DDN+ EESSRLL F G Sbjct: 3 KKRVLIGSPIRQSPHVLKEFLDSLRGLEQGELELNYIFVDDNESEESSRLLVNFEEEGLA 62 Query: 65 VFLQSSGLHDA---YIRNDITHFWNSNLVWKVAGFKNLMIRRAEAFGYDYLFLIDSDLVL 121 ++ Y+ +DITH W +L+ KVAG+KNLMI +A +GYDYLFL+DSDLVL Sbjct: 63 TLIKGDKGEKRPGDYVCDDITHHWRDHLIQKVAGYKNLMIEKALEWGYDYLFLVDSDLVL 122 Query: 122 HPDTLLHLIGTGRDIVSEVFWTQWQPGTILQPQVWMHDEYNQWDAEPGEQLSQEEINRRF 181 HP TL HL+ TG++I+SE+FWT W PG+ P VW++D Y+ + GE+LSQ++++ R Sbjct: 123 HPATLRHLVSTGKEIISEIFWTAWYPGSREMPNVWLYDHYDMSPRQRGEKLSQKDLDIRA 182 Query: 182 HAFLAKLQVPGIYEVGGLGACTLISSRAIASGASYDRIRNISYWGEDRHFCIRAAALGIP 241 F+ +L++PG+YEVGGLGACTL+S +A+ +G S+ I+N++ WGEDRHFC+RA ALG+ Sbjct: 183 QGFIDQLRIPGVYEVGGLGACTLLSRQALQAGISFSEIKNLTLWGEDRHFCVRANALGLS 242 Query: 242 LYVDTHYPALHLYRDSDLDKVADFIRLTTAAEP 274 L+VDTHYPA H+YR+S + V +F + +P Sbjct: 243 LWVDTHYPAYHIYRESSMAGVEEFKAVCRGEKP 275 >B7GKZ2.1 B7GKZ2_ANOFW Glycosyl/glycerophosphate transferase involved in teichoic acid biosynthesis Length = 769 Score = 293 bits (751), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 138/262 (52%), Positives = 182/262 (69%) Query: 5 KKRVLIGSPIHQKPQILQEFLDSXXXXXXXXXXXNFYLIDDNDEEESSRLLGTFAAGGNE 64 KKRVLIGSP+HQK ILQ FL S ++ IDDN+ E++ R+L F + Sbjct: 2 KKRVLIGSPVHQKAPILQLFLTSLEYLNTEGLEVHYLFIDDNESEDAKRVLLDFVRKKST 61 Query: 65 VFLQSSGLHDAYIRNDITHFWNSNLVWKVAGFKNLMIRRAEAFGYDYLFLIDSDLVLHPD 124 ++ +S YI ++ TH+WN LVWKVA FKN++I+ A +DYLF IDSD+VLHP+ Sbjct: 62 AYVLNSANSQKYICDENTHYWNEGLVWKVAHFKNIIIQFALEKDFDYLFFIDSDIVLHPE 121 Query: 125 TLLHLIGTGRDIVSEVFWTQWQPGTILQPQVWMHDEYNQWDAEPGEQLSQEEINRRFHAF 184 TL LI +DI+S +FWT+WQP PQVW+ D+Y Q+ + GE+L++E+I R F Sbjct: 122 TLQKLIEAKKDIISNIFWTKWQPDLPELPQVWVFDQYGQYYYKRGEKLTKEQIQDRHQQF 181 Query: 185 LAKLQVPGIYEVGGLGACTLISSRAIASGASYDRIRNISYWGEDRHFCIRAAALGIPLYV 244 L L+ PGIYEVGGLGACTLIS RA+ SG S+ I+N+S+WGEDRHFCIRA ALG L+V Sbjct: 182 LDMLRKPGIYEVGGLGACTLISRRALQSGVSFSEIKNVSFWGEDRHFCIRAQALGFDLFV 241 Query: 245 DTHYPALHLYRDSDLDKVADFI 266 DTHYPA H+YRDSD +K +++ Sbjct: 242 DTHYPAFHIYRDSDKEKAEEYM 263 >C0Z9Q5.1 C0Z9Q5_BREBN Putative uncharacterized protein Length = 233 Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 129/231 (55%), Positives = 170/231 (73%) Query: 378 RPKLTLTMVAKNEGQRFLRQVLQMHRKYIDEAVIIDDGSTDDTADICREVLQGIPLRLVR 437 R KLTL+M+ KNE R+LR+ L+ H+ +ID AVIIDDGS D TAD+CREVL+G+PL LV+ Sbjct: 3 RTKLTLSMIVKNESNRYLRRALEAHKDFIDAAVIIDDGSIDHTADLCREVLKGVPLHLVQ 62 Query: 438 NSVSKFSNEAELRRQQWEEVVKSDPEWILNLDADEIFEDRFASDIDSLLREESCDLFCFR 497 N+ S+FSNE LR+QQW+E +++DP WILNLDADE+ + F S + +L +++ + FR Sbjct: 63 NATSQFSNEVALRKQQWQETIQTDPGWILNLDADELMDSSFPSKVSEILEQQTYEAIYFR 122 Query: 498 LYDFWDDRHYREDEYWRSHLRYRPFLLRYREDFNFAWNDLPQHCGRLPENIFELPHLLSN 557 LYD W D HYRED YW++H YRPF+++YR DF + W + PQHCGR P +I + +L Sbjct: 123 LYDMWSDTHYREDVYWKAHHYYRPFMVKYRPDFPYIWRETPQHCGRFPLSINQFSYLCHP 182 Query: 558 LRLKHLGWSKAEYRLDKYLRYMLHDPDGQYGWKEQYMSILDPHPNLVPWTE 608 R+KH GW++ E R KY RY L DPD +YGWKEQY SILD HPNL+ W E Sbjct: 183 SRVKHFGWARLEDRQSKYNRYQLLDPDAKYGWKEQYESILDQHPNLLEWVE 233 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,549,234,362 Number of extensions: 147803290 Number of successful extensions: 321086 Number of sequences better than 1.0e-05: 24 Number of HSP's gapped: 321309 Number of HSP's successfully gapped: 33 Length of query: 608 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 466 Effective length of database: 1,722,912,073 Effective search space: 802877026018 Effective search space used: 802877026018 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)