BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0043.p (418 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DLI9.1 B1DLI9_9BACL Major facilitator superfamily MFS_1 471 e-131 B1DD27.1 B1DD27_9BACL Major facilitator superfamily MFS_1 458 e-127 B3KLS6.1 B3KLS6_9BACI Putative uncharacterized protein 227 1e-57 B0K7D0.1 B0K7D0_THEP3 Major facilitator superfamily MFS_1 137 2e-30 B0K1J3.1 B0K1J3_THEPX Major facilitator superfamily MFS_1 137 2e-30 >B1DLI9.1 B1DLI9_9BACL Major facilitator superfamily MFS_1 Length = 412 Score = 471 bits (1213), Expect = e-131, Method: Compositional matrix adjust. Identities = 247/406 (60%), Positives = 298/406 (73%), Gaps = 2/406 (0%) Query: 13 KRNYTLQLLTVFIGFLVFGFSENIKGPAIPRIQSDLRLDEMQXXXXXXXXXXXXXXACTF 72 + Y +QL T+FIGF++FGFSENIKGPAIPRIQ D L+E Q AC+F Sbjct: 9 NKIYAMQLATIFIGFIIFGFSENIKGPAIPRIQFDFMLNESQLGTLLSLNALGYLIACSF 68 Query: 73 TALLIRRIGIKAVSLLSFGSMAISGVFIFLSHSYPALSGSFFLMYIGNGMLEIGLAVLGA 132 TA L + GIK V++ +F SMA SG+ IF SH Y S S+FLMYIGNGMLEIGLA+L A Sbjct: 69 TAYLTKIWGIKWVTVAAFASMAFSGILIFFSHHYSMFSASYFLMYIGNGMLEIGLAILSA 128 Query: 133 RIFVKNTGTMMNLSHFFYGLSSTVAPLLSSGLMTVTVFGHLLDWRGVYLLILMLSVIPML 192 RIFV+NTGTMMN++H FYGLSSTVAPL+++GLM VT+ GH LDWRG+YL++LMLSVIP++ Sbjct: 129 RIFVRNTGTMMNMTHGFYGLSSTVAPLIATGLMKVTIAGHTLDWRGMYLVMLMLSVIPIV 188 Query: 193 PAFLGKFPGDTTLSEHRIPLSSISRDPVIWLMVAILSFGVISELAVGGWLVNFLEKAYGW 252 A L FPGD E R+PL + RD V+WLMV +L+FGV+SELAVGGWLVNFLEKAY W Sbjct: 189 IAMLSSFPGDDISHEDRVPLKVLLRDRVLWLMVLVLTFGVVSELAVGGWLVNFLEKAYNW 248 Query: 253 DTPAAAGMLSAFFLCFTLARLVLGPLTDKIGFALSLILFSAFTGVCTFAAILAGEPGAVL 312 DT A+GMLS FFLCF LARL+LGPLTD+IGF LSLI+FS F+ +CTFAAI GE A L Sbjct: 249 DTVNASGMLSIFFLCFALARLLLGPLTDRIGFVLSLIIFSGFSALCTFAAITGGESVAFL 308 Query: 313 FAVAGLGIAPIYPTVMALIADRYRNGSDTAITFVVTLIGVASVLGNYFIGAITEWIKQVF 372 FA +G+GIA IYPTVMA IA RY GSDTAITF VT++G+ SV+GNY IG +TE +K + Sbjct: 309 FAASGIGIAMIYPTVMAFIAKRYPKGSDTAITFTVTMMGLGSVIGNYLIGGVTELVKHIV 368 Query: 373 SSGQEDGIGLLRGLQAGYSFIGXXXXXXXXXXXXXXRHLKTRGQLM 418 G+ LLRGLQAGY FIG HL R +++ Sbjct: 369 --GENSPNSLLRGLQAGYGFIGLCAALCAITGIILYIHLSKRKEII 412 >B1DD27.1 B1DD27_9BACL Major facilitator superfamily MFS_1 Length = 421 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 233/416 (56%), Positives = 288/416 (69%), Gaps = 6/416 (1%) Query: 9 SASSKR----NYTLQLLTVFIGFLVFGFSENIKGPAIPRIQSDLRLDEMQXXXXXXXXXX 64 A SKR NYTL L VF GFL+FGFSENIKGPAIPR+Q+D L+E Q Sbjct: 6 EARSKRSLFSNYTLLLAVVFGGFLIFGFSENIKGPAIPRMQADFSLNEAQIGMLLALNSL 65 Query: 65 XXXXACTFTALLIRRIGIKAVSLLSFGSMAISGVFIFLSHSYPALSGSFFLMYIGNGMLE 124 AC+FT L+++IGIK +L++FGSM ISG+ ++ S SY + S+F MYIGNG+LE Sbjct: 66 GYLIACSFTGWLVKKIGIKLTTLIAFGSMVISGLCLYFSISYSTMVLSYFFMYIGNGLLE 125 Query: 125 IGLAVLGARIFVKNTGTMMNLSHFFYGLSSTVAPLLSSGLMTVTVFGH--LLDWRGVYLL 182 I LA+L A+IF +NTGTMMNL+HFFYGLSS VAPLL++ LM + +FG L WRG+Y L Sbjct: 126 IALAILAAQIFTRNTGTMMNLAHFFYGLSSIVAPLLAANLMGIHLFGSSSELGWRGMYCL 185 Query: 183 ILMLSVIPMLPAFLGKFPGDTTLSEHRIPLSSISRDPVIWLMVAILSFGVISELAVGGWL 242 +L L+++PM+P K P R+ L RD WL+V +LS GV+SE+++G WL Sbjct: 186 MLSLTLLPMIPTIFAKAPKQEEKHGERLSLREYIRDKAAWLLVGVLSLGVVSEMSIGSWL 245 Query: 243 VNFLEKAYGWDTPAAAGMLSAFFLCFTLARLVLGPLTDKIGFALSLILFSAFTGVCTFAA 302 VNFLEKAY W + +A MLSAFFLCFT ARLVLGP+TDKIG+ +SLI+ SAF+G+C+ AA Sbjct: 246 VNFLEKAYDWSSDTSAAMLSAFFLCFTFARLVLGPVTDKIGYTMSLIVLSAFSGLCSIAA 305 Query: 303 ILAGEPGAVLFAVAGLGIAPIYPTVMALIADRYRNGSDTAITFVVTLIGVASVLGNYFIG 362 ++ GEPGA LFA AG+GIAPIYPTVMALIA RY SDTAITF VTL+GVA+V GNY IG Sbjct: 306 VILGEPGAFLFAAAGIGIAPIYPTVMALIARRYSKESDTAITFTVTLMGVATVAGNYLIG 365 Query: 363 AITEWIKQVFSSGQEDGIGLLRGLQAGYSFIGXXXXXXXXXXXXXXRHLKTRGQLM 418 I E K F+ GL+ GLQAGY FIG RHLK RG L+ Sbjct: 366 LIIELFKDGFAEEAHPKAGLIAGLQAGYIFIGACALLCSVMSIALYRHLKKRGALL 421 >B3KLS6.1 B3KLS6_9BACI Putative uncharacterized protein Length = 292 Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 145/293 (49%), Positives = 179/293 (61%), Gaps = 12/293 (4%) Query: 136 VKNTGTMMN-LSHF-FYGLS-STVAPLLSSGLMT--VTVFGHLLDWRG-VYLLILMLSVI 189 +NTGT + HF FYG+ V P ++T + L+ G +LMLS + Sbjct: 2 CRNTGTNDEPVPHFIFYGIKLKRVGPDEWHPVLTGRFPCLNYTLNLAGECTWPMLMLSQL 61 Query: 190 PMLPAFLGKFPGDTTL--SEHRIPLSSISRDPVIWLMVAILSFGV-ISELAVGGW-LVNF 245 PM+PA + K T +E ++ + P ILSF I +AVG NF Sbjct: 62 PMIPALMSKVSRGTIYPKTERDSAEAAGQKIPRCGWSSKILSFRRRIGRMAVGRLGSSNF 121 Query: 246 LEKAYGWDTPAAAGMLSAFFLCFTLARLVLGPLTDKIGFALSLILFSAFTGVCTFAAILA 305 LEK+Y W+ AA GMLSAFFLCF+ ARL+LGP+TD+IGF LS+I+ S TGVCTF AI Sbjct: 122 LEKSYKWEPAAAGGMLSAFFLCFSAARLLLGPITDRIGFPLSIIILSGLTGVCTFVAIFG 181 Query: 306 GEPGAVLFAVAGLGIAPIYPTVMALIADRYRNGSDTAITFVVTLIGVASVLGNYFIGAIT 365 GE A LFA AG+GIAPIYPTVMALIA RY N SDTAITF VT++G+ SV+GNY IGAIT Sbjct: 182 GESYAFLFAAAGIGIAPIYPTVMALIAKRYPNESDTAITFTVTMMGIGSVIGNYAIGAIT 241 Query: 366 EWIKQVFSSGQEDGIGLLRGLQAGYSFIGXXXXXXXXXXXXXXRHLKTRGQLM 418 KQ++ SG E +GLLRGLQAGY FIG R+LK R QL+ Sbjct: 242 NGFKQMYGSGTE--LGLLRGLQAGYGFIGLCAVLCSLFGIVLYRYLKVRKQLI 292 >B0K7D0.1 B0K7D0_THEP3 Major facilitator superfamily MFS_1 Length = 398 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 9/355 (2%) Query: 13 KRNYTLQLLTVFIGFLVFGFSENIKGPAIPRIQSDLRLDEMQXXXXXXXXXXXXXXACTF 72 K YT+ + +++ ++ G EN+KGP I I++ +D + Sbjct: 15 KNAYTIAI--IYLLMMLIGIVENVKGPLIINIKTFYGVDYTMMGLFLSAGSFGFILSTFL 72 Query: 73 TALLIRRIGIKAVSLLSFGSMAISGVFIFLSHSYPALSGSFFLMYIGNGMLEIGLAVLGA 132 L +IG K+V + + + IF + + F+M +G G+LEIG+ + + Sbjct: 73 GGFLADKIGRKSVLISGLILIIAGILGIFAARKFIVFLIFAFVMNMGMGLLEIGINAVAS 132 Query: 133 RIFVKNTGTMMNLSHFFYGLSSTVAPLLSSGLMTVTVFGHLLDWRGVYLLILMLSVIPML 192 +F+ N MMNL HFFYG+ + ++P +++ L+ + W+ VYL + + I ML Sbjct: 133 IVFIVNQALMMNLLHFFYGVGAIISPNMTAKLLHIN-----FSWQQVYLTVGAIVFILML 187 Query: 193 PAFLGKFPGDTT-LSEHRIPLSSISRDPVIWLMVAILSFGVISELAVGGWLVNFLEKAYG 251 A K G+ ++ +I I D +WL ++L F V SEL +G W V F Y Sbjct: 188 AALEIKMHGEEKHIARDKIDYIQILSDKRMWLFASMLGFYVASELGIGNWAVTFFSAQYK 247 Query: 252 WDTPAAAGMLSAFFLCFTLARLVLGPLTDKIGFALSLILFSAFTGVCTFAAILAGEPGAV 311 D ++ L FF FT RLV G + ++IG+ SL +FS + + A+ +AG A Sbjct: 248 MDNTISSLYLGLFFATFTFGRLVGGFIVERIGYIKSLFIFSLVSSILI-ASGMAGRNFAF 306 Query: 312 LFAVAGLGIAPIYPTVMALIADRYRNGSDTAITFVVTLIGVASVLGNYFIGAITE 366 L +VAG + I+PT +A++ ++ I ++T+ ++L N+ IG + + Sbjct: 307 LISVAGFFYSIIFPTTIAIVMKEFKQHVTIIIAIILTISSTINMLANFLIGRLND 361 >B0K1J3.1 B0K1J3_THEPX Major facilitator superfamily MFS_1 Length = 398 Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 100/355 (28%), Positives = 174/355 (49%), Gaps = 9/355 (2%) Query: 13 KRNYTLQLLTVFIGFLVFGFSENIKGPAIPRIQSDLRLDEMQXXXXXXXXXXXXXXACTF 72 K YT+ + +++ ++ G EN+KGP I I++ +D + Sbjct: 15 KNAYTIAI--IYLLMMLIGIVENVKGPLIINIKTFYGVDYTMMGLFLSAGSFGFILSTFL 72 Query: 73 TALLIRRIGIKAVSLLSFGSMAISGVFIFLSHSYPALSGSFFLMYIGNGMLEIGLAVLGA 132 L +IG K+V + + + IF + + F+M +G G+LEIG+ + + Sbjct: 73 GGFLADKIGRKSVLISGLILIIAGILGIFAARKFIVFLIFAFVMNMGMGLLEIGINAVAS 132 Query: 133 RIFVKNTGTMMNLSHFFYGLSSTVAPLLSSGLMTVTVFGHLLDWRGVYLLILMLSVIPML 192 +F+ N MMNL HFFYG+ + ++P +++ L+ + W+ VYL + + I ML Sbjct: 133 IVFIVNQALMMNLLHFFYGVGAIISPNMTAKLLHIN-----FSWQQVYLTVGAIVFILML 187 Query: 193 PAFLGKFPGDTT-LSEHRIPLSSISRDPVIWLMVAILSFGVISELAVGGWLVNFLEKAYG 251 A K G+ ++ +I I D +WL ++L F V SEL +G W V F Y Sbjct: 188 AALEIKMHGEEKHIARDKIDYIQILSDKRMWLFASMLGFYVASELGIGNWAVTFFSAQYK 247 Query: 252 WDTPAAAGMLSAFFLCFTLARLVLGPLTDKIGFALSLILFSAFTGVCTFAAILAGEPGAV 311 D ++ L FF FT RLV G + ++IG+ SL +FS + + A+ +AG A Sbjct: 248 MDNTISSLYLGLFFATFTFGRLVGGFIVERIGYIKSLFIFSLVSSILI-ASGMAGRNFAF 306 Query: 312 LFAVAGLGIAPIYPTVMALIADRYRNGSDTAITFVVTLIGVASVLGNYFIGAITE 366 L +VAG + I+PT +A++ ++ I ++T+ ++L N+ IG + + Sbjct: 307 LISVAGFFYSIIFPTTIAIVMKEFKQHVTIIIAIILTISSTINMLANFLIGRLND 361 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.143 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,157,386,384 Number of extensions: 85915167 Number of successful extensions: 330720 Number of sequences better than 1.0e-05: 281 Number of HSP's gapped: 330978 Number of HSP's successfully gapped: 281 Length of query: 418 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 280 Effective length of database: 1,760,596,133 Effective search space: 492966917240 Effective search space used: 492966917240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 132 (55.5 bits)