BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0036.p (182 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z5B4.1 C0Z5B4_BREBN Putative acetyltransferase 242 1e-62 Q2B573.1 Q2B573_9BACI Aminoglycoside N6'-acetyltransferase 217 4e-55 B3K742.1 B3K742_9BACI GCN5-related N-acetyltransferase 164 3e-39 A6CJF0.1 A6CJF0_9BACI Putative uncharacterized protein 155 1e-36 C3E673.1 C3E673_BACTU Aminoglycoside N6'-acetyltransferase 141 2e-32 >C0Z5B4.1 C0Z5B4_BREBN Putative acetyltransferase Length = 192 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 113/177 (63%), Positives = 137/177 (77%) Query: 1 MLWGEKVYLRPLNGEDAELYYHMFYDSEARRLTGTQKHITKEQIAAYIERKAEDDSGVLL 60 L GE+V+LRP+ ED ELY+ + E R LTGTQKH T+EQI YIE K +D S VLL Sbjct: 15 FLEGERVFLRPIGTEDTELYFRSLFSKETRMLTGTQKHFTREQIHQYIENKGQDSSSVLL 74 Query: 61 LIALKDNDETIGDIAIQDMDRNNRTANLRIAIGDEAHQGKGYGREALLLMLDYGFGILNL 120 LI L +ND+ IGD+ I D+DRNNR A +RI+I A+QGKGYG EALLLMLDYGFGILNL Sbjct: 75 LICLCENDQVIGDVQIGDIDRNNRNAFIRISIDQNAYQGKGYGSEALLLMLDYGFGILNL 134 Query: 121 HRIELEVYAYNKRAAHVYESIGFVREGVRRQTLFYNHEYHDVIMMSMLENEYRERYI 177 HRIEL V+A+N+RA H YE +GF REGV+RQ L+YNH YHD I+MSML +EYR +Y+ Sbjct: 135 HRIELNVFAFNERAIHTYEKLGFQREGVQRQALYYNHAYHDSILMSMLADEYRAKYL 191 >Q2B573.1 Q2B573_9BACI Aminoglycoside N6'-acetyltransferase Length = 184 Score = 217 bits (553), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 98/173 (56%), Positives = 135/173 (78%) Query: 1 MLWGEKVYLRPLNGEDAELYYHMFYDSEARRLTGTQKHITKEQIAAYIERKAEDDSGVLL 60 L GE++YLRP++ ED ++Y + Y+ +R+LTG +K +K+QI +YI+ KAED S +LL Sbjct: 6 FLQGERIYLRPISTEDTDIYVKLLYNERSRKLTGLKKAFSKDQIFSYIKEKAEDSSSILL 65 Query: 61 LIALKDNDETIGDIAIQDMDRNNRTANLRIAIGDEAHQGKGYGREALLLMLDYGFGILNL 120 LI L +E IGDIA+QD+D NR AN+R+ I +E +QG+GYG EA+ LML Y FG+LNL Sbjct: 66 LIVLDGTNEVIGDIALQDIDSTNRNANIRVNISEEENQGRGYGSEAMELMLGYAFGVLNL 125 Query: 121 HRIELEVYAYNKRAAHVYESIGFVREGVRRQTLFYNHEYHDVIMMSMLENEYR 173 HRIEL V+ YN RA HVYE +GF++EGV+R+ LFY+H+YHD IMMS+LE++YR Sbjct: 126 HRIELNVFNYNDRALHVYEKLGFMQEGVQREALFYDHQYHDSIMMSILEDDYR 178 >B3K742.1 B3K742_9BACI GCN5-related N-acetyltransferase Length = 183 Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 84/173 (48%), Positives = 122/173 (70%), Gaps = 4/173 (2%) Query: 4 GEKVYLRPLNGEDAELYYHMFYDSEARRLTGTQKHITKEQIAAYIERK--AEDDSGVLLL 61 G+++ LRP+ ++ ++Y+ + D E+ RLTGTQ+ TK+ IAA+I A +D + ++ Sbjct: 11 GDRIVLRPVREDEFDVYFELLQDGESNRLTGTQQTFTKDSIAAWIHNIGYAHEDR-LDMM 69 Query: 62 IALKDNDETIGDIAIQDMDRNNRTANLRIAIGDEAHQGKGYGREALLLMLDYGFGILNLH 121 IA K +DE IG++ + ++D NNR+ N+RI+I H KGYG EAL LML YGF L LH Sbjct: 70 IAEKQSDELIGEVVLNEIDLNNRSGNIRISISGR-HSNKGYGTEALKLMLRYGFESLRLH 128 Query: 122 RIELEVYAYNKRAAHVYESIGFVREGVRRQTLFYNHEYHDVIMMSMLENEYRE 174 RIEL VYA+N RA HVYE +GFVREG R L+++ +HD+I+MS+LE E+R+ Sbjct: 129 RIELGVYAFNPRAIHVYEKLGFVREGTLRDYLYWDGTFHDMIVMSILEEEFRQ 181 >A6CJF0.1 A6CJF0_9BACI Putative uncharacterized protein Length = 182 Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 81/172 (47%), Positives = 113/172 (65%) Query: 1 MLWGEKVYLRPLNGEDAELYYHMFYDSEARRLTGTQKHITKEQIAAYIERKAEDDSGVLL 60 L G+ +YLR ED + E R+LTG QK +T ++I E A DDS V L Sbjct: 4 FLEGQTIYLRYFQKEDTQKILKALSYPEIRKLTGLQKFLTPQKIEKAYEAFALDDSRVDL 63 Query: 61 LIALKDNDETIGDIAIQDMDRNNRTANLRIAIGDEAHQGKGYGREALLLMLDYGFGILNL 120 +IALK+ +E IGD+A+ ++D NR AN+RIA+ D + GKGYG EAL L+L++GF LNL Sbjct: 64 VIALKETNEVIGDLALNEIDNLNRNANVRIALHDPKYFGKGYGTEALRLVLEFGFRTLNL 123 Query: 121 HRIELEVYAYNKRAAHVYESIGFVREGVRRQTLFYNHEYHDVIMMSMLENEY 172 +RI L VY++N RA YE +GF +EG+ R LFY+ E+HD I+M +L +E+ Sbjct: 124 YRIGLNVYSFNARAKKSYEKLGFKQEGIIRSELFYDGEFHDNIIMGVLRDEF 175 >C3E673.1 C3E673_BACTU Aminoglycoside N6'-acetyltransferase Length = 178 Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 72/174 (41%), Positives = 109/174 (62%) Query: 2 LWGEKVYLRPLNGEDAELYYHMFYDSEARRLTGTQKHITKEQIAAYIERKAEDDSGVLLL 61 L E++YLRPL DA + D E R +TGT+ + EQI +I+ D S Sbjct: 3 LESERIYLRPLCQLDAPIILQSTMDDEIRYMTGTKSTFSLEQITKHIDHINNDSSRYDFA 62 Query: 62 IALKDNDETIGDIAIQDMDRNNRTANLRIAIGDEAHQGKGYGREALLLMLDYGFGILNLH 121 I L+ D+ IG+++I D+D N+ A RI+I A G+GYG EA+ ++L + F L+L+ Sbjct: 63 ICLQSTDKMIGELSILDIDEENKRAGFRISILSIALTGQGYGTEAIKIVLRFVFEQLSLN 122 Query: 122 RIELEVYAYNKRAAHVYESIGFVREGVRRQTLFYNHEYHDVIMMSMLENEYRER 175 R++LEV+++N R YE +GFV+EG RQ+LFYN Y D I+M++L+++Y ER Sbjct: 123 RLQLEVFSHNLRGIKAYEKVGFVKEGTLRQSLFYNDTYSDEIIMAILKSDYIER 176 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,068,182,843 Number of extensions: 42348568 Number of successful extensions: 105133 Number of sequences better than 1.0e-05: 1921 Number of HSP's gapped: 105569 Number of HSP's successfully gapped: 1921 Length of query: 182 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 55 Effective length of database: 1,864,227,298 Effective search space: 102532501390 Effective search space used: 102532501390 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)