BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0564.0034.p
         (109 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0Z672.1 C0Z672_BREBN Putative uncharacterized protein                 77   5e-13
B3KI45.1 B3KI45_9BACI Putative uncharacterized protein                 72   2e-11
Q1JYZ2.1 Q1JYZ2_DESAC Putative uncharacterized protein                 53   8e-06
Q2LEX9.1 Q2LEX9_9ACTO Putative uncharacterized protein                 53   8e-06

>C0Z672.1 C0Z672_BREBN Putative uncharacterized protein
          Length = 287

 Score = 77.0 bits (188), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 56/103 (54%)

Query: 5   NRSLANTLAGYSVMNGDPAFGQFVEYGRISRANLVRLYALSDGMFHFIEHADDPHKWEQL 64
           NR  AN   GY V+NGD A   F+EYGRI+R  +  L   +DG+F          +WE+ 
Sbjct: 182 NRYQANGPGGYGVLNGDVACRDFIEYGRINRVGVKALVLATDGLFMPRALGGAQPEWEET 241

Query: 65  LARLDDWGIDNEMDHLTGLEDQDPLCTQYPRHKKSDDKSVVIV 107
           +  +   G+    D L  LE+ DP C  Y R KKSDDK+ +I+
Sbjct: 242 VLPIVHKGLQRYTDELISLENYDPECIHYIRFKKSDDKTGMIL 284


>B3KI45.1 B3KI45_9BACI Putative uncharacterized protein
          Length = 284

 Score = 71.6 bits (174), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 1/104 (0%)

Query: 5   NRSLANTLAGYSVMNGDPAFGQFVEYGRISRANLVRLYALSDGMFHFIEHA-DDPHKWEQ 63
           NR  +N   GY V+NGDP    F+EYG+I+R+ +  L  L+DG+F  +     D   W+ 
Sbjct: 176 NRFKSNVNGGYGVLNGDPRAVDFLEYGKINRSRIAHLILLTDGLFWPVNDVPSDRSYWDY 235

Query: 64  LLARLDDWGIDNEMDHLTGLEDQDPLCTQYPRHKKSDDKSVVIV 107
           +  R+   G++     L  +E+ DP C  + R KKSDDK+ +++
Sbjct: 236 IAQRILLKGLEQYTHELQDIEEADPECLTHARFKKSDDKTGLVL 279


>Q1JYZ2.1 Q1JYZ2_DESAC Putative uncharacterized protein
          Length = 276

 Score = 53.1 bits (126), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 15  YSVMNGDPAFGQFVEYGRISRANLVRLYALSDGMFHFIEHADDPHKWEQLLARLDDWGID 74
           Y V+ GD     F+ +GRI       + A SDG+F      DDP  +E +  R  + G+D
Sbjct: 175 YGVLCGDERVESFLHHGRIRHGEFSHVLAFSDGLFPPSSAGDDP-DFEAIAERYLEDGLD 233

Query: 75  NEMDHLTGLEDQDPLCTQYPRHKKSDDKSVVIV 107
                +   E  DP C Q+PR K  DD + + V
Sbjct: 234 GVGRWVRQQEKADPHCRQFPRFKPHDDMAAIAV 266


>Q2LEX9.1 Q2LEX9_9ACTO Putative uncharacterized protein
          Length = 360

 Score = 53.1 bits (126), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 10  NTLAGYSVMNGDPAFGQFVEYGRISRANLVRLYALSDGMFHFIEHADDPHKWEQLLARLD 69
           N   GY +   DP+       G +S  N+VR   ++DG    ++       W ++L  L+
Sbjct: 174 NVKGGYWIAATDPSAVDEAIVGSVSLRNVVRFATMTDGAARIVDLFKS-RSWLRVLNTLE 232

Query: 70  DWGIDNEMDHLTGLEDQDPLCTQYPRHKKSDDKSVVIVD 108
             G    +  +  LED DP+   +PR+K SDD SVV VD
Sbjct: 233 QDGPSFLLADVRHLEDSDPVGENFPRNKTSDDASVVFVD 271


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 686,677,590
Number of extensions: 25762726
Number of successful extensions: 54083
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 54191
Number of HSP's successfully gapped: 4
Length of query: 109
Length of database: 3,060,696,203
Length adjustment: 77
Effective length of query: 32
Effective length of database: 2,335,278,048
Effective search space: 74728897536
Effective search space used: 74728897536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)