BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0564.0033.p
         (175 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KI45.1 B3KI45_9BACI Putative uncharacterized protein                 97   6e-19
C0Z672.1 C0Z672_BREBN Putative uncharacterized protein                 96   1e-18
A7GQZ2.1 A7GQZ2_BACCN Serine/threonine protein phosphatase             75   2e-12
C3H489.1 C3H489_BACTU Putative uncharacterized protein                 75   2e-12
C3ENV9.1 C3ENV9_BACTK Putative uncharacterized protein                 75   2e-12

>B3KI45.1 B3KI45_9BACI Putative uncharacterized protein
          Length = 284

 Score = 97.1 bits (240), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 76/129 (58%)

Query: 24  NEDAIVVHANCHIYGVIDGVSAMXXXXXXXXXXXXYIAARLLADGLQASEPEDGLMQAVL 83
           NEDA++ H    +YGV+DGVS++            Y+AA+ + +  ++ +  + L +   
Sbjct: 16  NEDALINHEQAGLYGVLDGVSSVVPYLSDKKETGGYLAAQAVKNFFESLDQVEQLAEHAA 75

Query: 84  RANDRLRQQMAEAGVDLAYKWKLWGAVFAVCKVYETFVDFVQCGDCMLFARYKDGTVRVL 143
            AND+LR+ M +A VD+  K  LWG   A+ ++ E  V+F+Q GDCM+ A Y+DG VR L
Sbjct: 76  AANDKLRELMQQAHVDMEKKDGLWGTALALVRIQEERVEFLQTGDCMILAVYRDGEVRPL 135

Query: 144 TRNQVAPFD 152
           T  QVA  +
Sbjct: 136 TWRQVAHLE 144


>C0Z672.1 C0Z672_BREBN Putative uncharacterized protein
          Length = 287

 Score = 95.5 bits (236), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 2/132 (1%)

Query: 22  RPNEDAIVVHANCHIYGVIDGVSAMXXXXXXXXXXXXYIAARLLADGLQASEPEDGLMQA 81
           + NEDA V+    H+Y VIDG++++             IAA L+   L+A  PED ++  
Sbjct: 20  KSNEDAYVIQQVKHVYAVIDGITSLIPYENAAGQTGGAIAAELVKKQLEAI-PEDAVLHD 78

Query: 82  VLRA-NDRLRQQMAEAGVDLAYKWKLWGAVFAVCKVYETFVDFVQCGDCMLFARYKDGTV 140
            +   N+ LR+QM ++G+DL  K  LWGA  AV +V +  +++ Q GDCM+FA Y D  V
Sbjct: 79  YMEMINEALREQMRQSGIDLEKKEALWGAACAVVRVKDAQIEYAQLGDCMIFAVYDDDMV 138

Query: 141 RVLTRNQVAPFD 152
           R LT  QV+  +
Sbjct: 139 RPLTHTQVSHLE 150


>A7GQZ2.1 A7GQZ2_BACCN Serine/threonine protein phosphatase
          Length = 270

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 69/140 (49%)

Query: 9   LNVRAGTRPGNPERPNEDAIVVHANCHIYGVIDGVSAMXXXXXXXXXXXXYIAARLLADG 68
           + ++   +    +R  ED    + +  +YGV DG + +            Y+A+ L A+ 
Sbjct: 1   MRIKTWQKKSPLKRECEDTFFCNEDVKMYGVCDGATPLVAFQDENGHNGAYLASNLFANR 60

Query: 69  LQASEPEDGLMQAVLRANDRLRQQMAEAGVDLAYKWKLWGAVFAVCKVYETFVDFVQCGD 128
            +A +    L + ++ AN+ L+++M    VD   K  LW    A  ++ ET V + Q GD
Sbjct: 61  FKAQKEIISLEKEIIEANEALQKEMERYKVDTLKKDHLWCTCIAAVRIGETSVQYAQLGD 120

Query: 129 CMLFARYKDGTVRVLTRNQV 148
           CM+   + D TV+VLT++ V
Sbjct: 121 CMIAVTFHDETVKVLTKDTV 140


>C3H489.1 C3H489_BACTU Putative uncharacterized protein
          Length = 273

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 63/124 (50%)

Query: 25  EDAIVVHANCHIYGVIDGVSAMXXXXXXXXXXXXYIAARLLADGLQASEPEDGLMQAVLR 84
           ED+   +    IYGV DG + +            YIA+ L A    A      L  AV +
Sbjct: 23  EDSYFCNKEKKIYGVCDGATPLVPFRDEKGHNGAYIASHLFASYFTALRENHSLQFAVAK 82

Query: 85  ANDRLRQQMAEAGVDLAYKWKLWGAVFAVCKVYETFVDFVQCGDCMLFARYKDGTVRVLT 144
           AN+ L+ +M E  VD+  K  LW    A  ++    +++ Q GDCM+ A +++GT++VLT
Sbjct: 83  ANEALQSKMLEYEVDMGKKEHLWCTCIAAVQIVGEKIEYAQLGDCMIVATFQNGTMQVLT 142

Query: 145 RNQV 148
           ++ V
Sbjct: 143 KDTV 146


>C3ENV9.1 C3ENV9_BACTK Putative uncharacterized protein
          Length = 273

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 64/124 (51%)

Query: 25  EDAIVVHANCHIYGVIDGVSAMXXXXXXXXXXXXYIAARLLADGLQASEPEDGLMQAVLR 84
           ED+   + +  IYGV DG + +            YIA+ L A+   A      L  AV +
Sbjct: 23  EDSYFCNKDKKIYGVCDGATPLVPFRDENGHNGAYIASHLFANYFTALRENHSLQFAVTK 82

Query: 85  ANDRLRQQMAEAGVDLAYKWKLWGAVFAVCKVYETFVDFVQCGDCMLFARYKDGTVRVLT 144
           AN+ L+ +M E  VD   K  LW    A  ++    +++ Q GDCM+ A +++GT++VLT
Sbjct: 83  ANEALQSKMLEYEVDTRKKEHLWCTCIAAVQIVGEKIEYAQLGDCMIVATFQNGTMQVLT 142

Query: 145 RNQV 148
           ++ V
Sbjct: 143 KDTV 146


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.323    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 927,001,299
Number of extensions: 30212202
Number of successful extensions: 54528
Number of sequences better than 1.0e-05: 81
Number of HSP's gapped: 54530
Number of HSP's successfully gapped: 81
Length of query: 175
Length of database: 3,060,696,203
Length adjustment: 126
Effective length of query: 49
Effective length of database: 1,873,648,313
Effective search space: 91808767337
Effective search space used: 91808767337
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 126 (53.1 bits)