BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0022.p (141 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DEW7.1 B1DEW7_9BACL 3-demethylubiquinone-9 3-methyltransferase 152 7e-36 C0ZEY5.1 C0ZEY5_BREBN Putative uncharacterized protein 147 3e-34 B3K9B5.1 B3K9B5_9BACI Glyoxalase/bleomycin resistance protein/di... 140 3e-32 A6CIQ0.1 A6CIQ0_9BACI PhnB protein 140 4e-32 Q65MX5.1 Q65MX5_BACLD Putative uncharacterized protein 133 5e-30 >B1DEW7.1 B1DEW7_9BACL 3-demethylubiquinone-9 3-methyltransferase Length = 140 Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 72/140 (51%), Positives = 98/140 (70%) Query: 1 MTLQLNPFILLDGHAQQAIEFYQEVLGAKLLFKQTAGEGPQNPDAPMSEEAKARIAHSVL 60 M +QL PFI+LDG A++AI FY++ L AK++FKQT GE P +SE+A+ R+AHSVL Sbjct: 1 MEVQLTPFIMLDGVAREAIAFYEQALDAKVVFKQTFGEAPGEAGQAVSEQARDRLAHSVL 60 Query: 61 RVGETDFFVADLEEGLVLHPGNGINICITADNTAEAEQLYHSLQKGGHVEIELGPTYFSP 120 ++G TD FVAD + G +NIC+T + +A + Y +L++GG V + L +FSP Sbjct: 61 KIGGTDLFVADTNPEVRFAQGKQVNICVTVVDKEQARKYYEALKEGGQVVLPLQEIHFSP 120 Query: 121 AYGMVTDKFGVAFQVFTKRG 140 AYGMVTDKFGV FQ+FTKR Sbjct: 121 AYGMVTDKFGVTFQIFTKRA 140 >C0ZEY5.1 C0ZEY5_BREBN Putative uncharacterized protein Length = 143 Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 67/139 (48%), Positives = 99/139 (71%) Query: 1 MTLQLNPFILLDGHAQQAIEFYQEVLGAKLLFKQTAGEGPQNPDAPMSEEAKARIAHSVL 60 M L+L P+I+LDG A +AI FY+ LGA++LFKQT GE P+NP+ P+ EAK RI H+ + Sbjct: 1 MALRLIPYIVLDGTASEAISFYEGALGAEVLFKQTFGEMPENPEFPLPAEAKNRIGHATI 60 Query: 61 RVGETDFFVADLEEGLVLHPGNGINICITADNTAEAEQLYHSLQKGGHVEIELGPTYFSP 120 RVGET+ +D+ G PG+ + ICI+ D+ ++ +++++LQ+GG V + L T+FSP Sbjct: 61 RVGETEMMFSDIFPGQPHQPGDQVTICISTDDKEQSHKIFNALQEGGQVIMPLQETFFSP 120 Query: 121 AYGMVTDKFGVAFQVFTKR 139 AYG V DKFG+ FQ++T Sbjct: 121 AYGNVKDKFGITFQIYTNN 139 >B3K9B5.1 B3K9B5_9BACI Glyoxalase/bleomycin resistance protein/dioxygenase Length = 141 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 60/138 (43%), Positives = 99/138 (71%) Query: 1 MTLQLNPFILLDGHAQQAIEFYQEVLGAKLLFKQTAGEGPQNPDAPMSEEAKARIAHSVL 60 MTL++NP++++DG+A++AI+FY++ L A+++ QT GE P NPD P+ + A+ RI+H++L Sbjct: 1 MTLRMNPYLVMDGNAKEAIQFYEKALDAQVVMVQTFGEMPANPDFPLPDSARDRISHALL 60 Query: 61 RVGETDFFVADLEEGLVLHPGNGINICITADNTAEAEQLYHSLQKGGHVEIELGPTYFSP 120 +VGETD +D G + N + ICI D +A+++Y +L++GG V + L T++SP Sbjct: 61 KVGETDLMFSDTFPGQPVQSSNQVQICIMTDQAEQAKRIYEALREGGQVVMPLQETFWSP 120 Query: 121 AYGMVTDKFGVAFQVFTK 138 AYG+V DKFGV + + T+ Sbjct: 121 AYGIVADKFGVNWNISTE 138 >A6CIQ0.1 A6CIQ0_9BACI PhnB protein Length = 144 Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 65/135 (48%), Positives = 91/135 (67%) Query: 1 MTLQLNPFILLDGHAQQAIEFYQEVLGAKLLFKQTAGEGPQNPDAPMSEEAKARIAHSVL 60 M++ LNP++ DG+A++A+ FY++ LG K++ T GEGP NPD P+S++ K RI H+ L Sbjct: 1 MSISLNPYLFFDGNAREAVHFYEKALGGKVMGIMTYGEGPDNPDYPLSDDMKNRIMHAHL 60 Query: 61 RVGETDFFVADLEEGLVLHPGNGINICITADNTAEAEQLYHSLQKGGHVEIELGPTYFSP 120 +VGE D +D EG+ PGN I I I A A++++ +L+ GG V I L T FSP Sbjct: 61 KVGEGDLMFSDTYEGMPYQPGNSIQIAIQPKEEARAKEIFAALEDGGQVVIPLHKTDFSP 120 Query: 121 AYGMVTDKFGVAFQV 135 YGMVTDKFGV+F V Sbjct: 121 LYGMVTDKFGVSFNV 135 >Q65MX5.1 Q65MX5_BACLD Putative uncharacterized protein Length = 141 Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 62/139 (44%), Positives = 94/139 (67%) Query: 1 MTLQLNPFILLDGHAQQAIEFYQEVLGAKLLFKQTAGEGPQNPDAPMSEEAKARIAHSVL 60 M + P+IL++G A++AI++Y++VL A++ F QT GEGP + A E+ IAH+VL Sbjct: 1 MKTRFTPYILMNGRAKEAIDYYRDVLDAEVKFSQTIGEGPADEAANFKEDELDFIAHAVL 60 Query: 61 RVGETDFFVADLEEGLVLHPGNGINICITADNTAEAEQLYHSLQKGGHVEIELGPTYFSP 120 +G+ +AD+ L GN ++IC+TA + + A++L+ L + G V++EL TYFSP Sbjct: 61 TIGDAVLMIADIIPELPFQSGNQLSICVTAADVSSAKRLFGKLSERGEVKLELKETYFSP 120 Query: 121 AYGMVTDKFGVAFQVFTKR 139 AYG+VTD FGVAFQ+F R Sbjct: 121 AYGIVTDPFGVAFQIFAAR 139 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 856,187,891 Number of extensions: 34118693 Number of successful extensions: 76260 Number of sequences better than 1.0e-05: 467 Number of HSP's gapped: 75919 Number of HSP's successfully gapped: 467 Length of query: 141 Length of database: 3,060,696,203 Length adjustment: 104 Effective length of query: 37 Effective length of database: 2,080,910,643 Effective search space: 76993693791 Effective search space used: 76993693791 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)