BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0021.p (271 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DI54.1 B1DI54_9BACL Glycerophosphoryl diester phosphodiesterase 221 6e-56 C0GUJ1.1 C0GUJ1_9DELT Glycerophosphodiester phosphodiesterase EC... 79 6e-13 C0G043.1 C0G043_9FIRM Putative uncharacterized protein 74 1e-11 A4AKR6.1 A4AKR6_9ACTN Putative glycerophosphoryl diester phospho... 73 2e-11 Q8RB32.1 Q8RB32_THETN Glycerophosphoryl diester phosphodiesterase 68 7e-10 >B1DI54.1 B1DI54_9BACL Glycerophosphoryl diester phosphodiesterase Length = 253 Score = 221 bits (562), Expect = 6e-56, Method: Compositional matrix adjust. Identities = 111/245 (45%), Positives = 156/245 (63%), Gaps = 3/245 (1%) Query: 21 KPFPFITAHTGCMETLDNTLDAVRMGIELGADIVEDDVRVTKDGIAVMAHDDIWTTAAGR 80 + FP ITAH G M T +TL +V++G+ELGAD+VE+D+RVT+DGI V+AHDD W T Sbjct: 3 RSFPLITAHAGSMNTEAHTLRSVQIGLELGADVVEEDIRVTRDGIPVLAHDDEWLTVERF 62 Query: 81 SISISETNFTELKNVEVAVDYAGKQGSMTFSTLEEMLRLIKPTGTIANXXXXXXXXXXXX 140 + +I+E + EL + ++ GK ++ LE++L L++ +G I N Sbjct: 63 NANIAEMTYAELTKLHSELER-GKVPALL--KLEDILPLVQASGKIVNLDLKVDAAIEPA 119 Query: 141 XXXXHSLDMLEQVFLSGCEKERALLAQRRQPQLRKLLNADIRLFRTLPYEFAVEQTCREA 200 + +Q F SGCE ERALLA+R QP++ KLLN ++ LF+TLPY A+ QTC +A Sbjct: 120 AALVRKFGLSQQAFFSGCEWERALLAERLQPEMSKLLNTNVELFKTLPYREAMIQTCADA 179 Query: 201 LEASCFGINIYHEVVTPWFMERARASGLPVYVWTVNETQLMEHYADLGVASITARNVQAL 260 LEASC G+NIYH ++ F+E A G+PVY WTV + LM YA+ GV SIT RNV ++ Sbjct: 180 LEASCIGVNIYHGILRQEFVEYAAELGIPVYAWTVEDEALMRQYAEWGVHSITTRNVASI 239 Query: 261 ADLKQ 265 +KQ Sbjct: 240 MHVKQ 244 >C0GUJ1.1 C0GUJ1_9DELT Glycerophosphodiester phosphodiesterase EC=3.1.4.46 Length = 602 Score = 78.6 bits (192), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 18/248 (7%) Query: 25 FITAHTGC-METLDNTLDAVRMGIELGADIVEDDVRVTKDGIAVMAHDDIWTTAAGRSIS 83 +I+AH G M +NT+ A+ I GAD VE DVR+T D + V+ HD AG+ + Sbjct: 351 YISAHRGSSMLAPENTIPAIERAIVDGADYVEIDVRLTADKVPVLLHDRDLRRVAGKPVP 410 Query: 84 ISETNFTELKNVEVAVDYAGKQGSMTFSTLEEMLRLIKPTGTIANXXXXXXXXXXXXXXX 143 I E + E++ ++ + + + TLEE++ ++ I Sbjct: 411 IWELDLKEVQRLDAGSWFHPRFAGVGIPTLEEVIEVVGDRARIYLEIKPSRHTPDLTRIV 470 Query: 144 XHSL---DMLEQVFLSGCEKERALLAQRRQPQLRKLLNADIRLFRTLPYEFAVEQTCREA 200 L D ++QV L + E A+ +P+LR +L A+ + R Sbjct: 471 VELLQEKDYVDQVLLGAMDPEVLKEARNLEPELRT----------SLFVHTAIGEPDRSL 520 Query: 201 LEASCFGINIYHEVVTPWFMERARASGLPVYVWTVNETQLMEHYADLGVASITARNVQAL 260 L+A + + + T ++RA G ++VWTVN+ + M + D+GV +I + L Sbjct: 521 LDA----LGLRAAITTVEDIQRAHRHGHELHVWTVNDRREMSRFIDMGVDNIITDRPEVL 576 Query: 261 ADLKQARA 268 A+L + RA Sbjct: 577 AELLRERA 584 >C0G043.1 C0G043_9FIRM Putative uncharacterized protein Length = 262 Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 24/226 (10%) Query: 37 DNTLDAVRMGIELGADIVEDDVRVTKDGIAVMAHDDIWTTAAGRSISISETNFTELKNV- 95 +NTLDA + +E+GAD +E DV++TKDG V+ HD+ + + + + ELK Sbjct: 20 ENTLDAFQKAVEMGADGIELDVQMTKDGELVVIHDETIDRVSNGKGWVKDYTYEELKKFN 79 Query: 96 --EVAVDYAGKQGSMTFSTLEEMLRLIKPTGTIANXXXXXXXXXXXXXXXXHSLDMLEQV 153 + ++Y ++ TLE++ RLIKPT N L++ E++ Sbjct: 80 FNKTHLEYTKEE----IPTLEQVYRLIKPTNLTIN-VEIKTGIVFYPGIEERVLELTERL 134 Query: 154 FLSGCEKERALLAQRRQPQLRKLLNADIRLFRTLPYE----FAVEQTCREALEASCF--- 206 + KER + + +RK+ D + + YE AV+ C + ++A Sbjct: 135 GM----KERVIYSSFNHYTIRKIKELDPQAKTGMLYEDGIIDAVDYAC-DVVKADALHPA 189 Query: 207 GINIYHEVVTPWFMERARASGLPVYVWTVNETQLMEHYADLGVASI 252 G N+++ P F+ER R ++VWT+NE + M + GV ++ Sbjct: 190 GYNVFY----PGFLERCRERKRLLHVWTINEEKHMRMLCEAGVDAL 231 >A4AKR6.1 A4AKR6_9ACTN Putative glycerophosphoryl diester phosphodiesterase Length = 260 Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 62/235 (26%), Positives = 99/235 (42%), Gaps = 16/235 (6%) Query: 24 PFITAHTG-CMETLDNTLDAVRMGIELGADIVEDDVRVTKDGIAVMAHDDIWTTAAGRSI 82 P + AH G E +NT+ A + +GA +E DV + DG+AV++HD AGR + Sbjct: 20 PRVLAHRGLATEAPENTMLAFAKAVAVGAQYIETDVHSSLDGVAVVSHDSTLHRVAGRDL 79 Query: 83 SISETNFTELKNVEVAVDYAGKQGSMTFSTLEEMLRLIKPTGTIANXXXXXXXXXXXXXX 142 ++ + EL+ +D QG F +L E L T N Sbjct: 80 AVDKLTMAELRR----IDLGDGQG---FCSLAEALDAFPETRF--NIDVKSSGAVLPTVR 130 Query: 143 XXHSLDMLEQVFLSGCEKERALLAQRRQPQLRKLLNADIRLFRTLPYEFAVEQTCREALE 202 L E+V ++ +++R + P + +A + L + + R +L Sbjct: 131 AIRDLTATERVLVTSFDEKRRAATAAQLPGVASSASARRFMVALLSAKTGISPAMRRSL- 189 Query: 203 ASCFGINIYHE-----VVTPWFMERARASGLPVYVWTVNETQLMEHYADLGVASI 252 A I + + V T ++R GL ++VWT+NE Q M H DLGV I Sbjct: 190 AGLVAIQVPEKALGLRVTTQRMIQRVHNLGLEMHVWTINEPQRMRHLLDLGVDGI 244 >Q8RB32.1 Q8RB32_THETN Glycerophosphoryl diester phosphodiesterase Length = 243 Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 54/240 (22%), Positives = 101/240 (42%), Gaps = 6/240 (2%) Query: 25 FITAHTGCMETL-DNTLDAVRMGIELGADIVEDDVRVTKDGIAVMAHDDIWTTAAGRSIS 83 + AH G + + +NT+ A + +ELGAD +E DV++TKDG V+ HD+ Sbjct: 4 LVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGF 63 Query: 84 ISETNFTELKNVEVAVDYAGKQGSMTFSTLEEMLRLIKPTGTIANXXXXXXXXXXXXXXX 143 + + E+K ++ + + K TL E+ LI + N Sbjct: 64 VKDFTLEEIKKLDAGIKFGEKFAGERIPTLYEVFELIGDKDFLVNIEIKSGIVLYPGIEE 123 Query: 144 XHSLDMLEQVFLSGCEKERALLAQRRQPQLRKLLNADIRLFRTLPYEFAVEQTCREALEA 203 + E F +ER +++ LR + L L Y+ + + AL Sbjct: 124 KLIKAIKEYNF-----EERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRM 178 Query: 204 SCFGINIYHEVVTPWFMERARASGLPVYVWTVNETQLMEHYADLGVASITARNVQALADL 263 + ++ ++ + P +E + +G+ ++ WTV+ + ME GV I + + L +L Sbjct: 179 EAYSLHPFYFNIIPELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGIITDDPETLINL 238 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.133 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,256,603,749 Number of extensions: 43314590 Number of successful extensions: 119352 Number of sequences better than 1.0e-05: 170 Number of HSP's gapped: 119611 Number of HSP's successfully gapped: 170 Length of query: 271 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 138 Effective length of database: 1,807,701,208 Effective search space: 249462766704 Effective search space used: 249462766704 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)