BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0564.0020.p (310 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DI55.1 B1DI55_9BACL PHP domain protein 404 e-111 B5YBW8.1 B5YBW8_DICT6 Putative secreted protein 120 2e-25 B8E1K3.1 B8E1K3_DICTD Phosphoesterase PHP domain protein 115 6e-24 A5V1Q3.1 A5V1Q3_ROSS1 PHP C-terminal domain protein 106 3e-21 A7NHJ5.1 A7NHJ5_ROSCS PHP domain protein 102 4e-20 >B1DI55.1 B1DI55_9BACL PHP domain protein Length = 331 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 191/308 (62%), Positives = 237/308 (76%), Gaps = 1/308 (0%) Query: 1 LDELALGAKALGFDCIALTDHNTMAGLAHKEQIERETGLLIIPGMEWTTFFGHMVTIGIE 60 L ELA GAKALGFDC+ALTDHNTM GL +E +ERETGL II GMEWTTF+GHMVTIG+ Sbjct: 21 LLELAQGAKALGFDCVALTDHNTMTGLKDREYVERETGLTIISGMEWTTFYGHMVTIGLT 80 Query: 61 DYQDWRKVGPGDIHAGLARVHEQGGLAGMAHPFRPGSPMCTGCFWEFEIRDWNEIDYIEV 120 ++ DWR GPGDIH G+ +VH GG+AGMAHP+R G+PMCTGCFWEFEIRDWN++DYIEV Sbjct: 81 EFVDWRPAGPGDIHGGIEQVHAFGGIAGMAHPYRIGNPMCTGCFWEFEIRDWNQLDYIEV 140 Query: 121 WSTTFAPVKKNNIRAYRLWTDKLNEGFRLAATSGRDWHFQERTDAPLSVTYLRIQEGEAP 180 WS TF +K +N RA+RLWT++LN+GFR+AATSGRDWH QE+TDAP+SVTYL+++E E Sbjct: 141 WSGTFPSIKTDNNRAFRLWTERLNDGFRIAATSGRDWHVQEQTDAPISVTYLQLEENEGS 200 Query: 181 FTERAIAALSSGRASVTLGPRLDLQVNVNGEVYQIGDAVSSSDERERLASVKVLADFTSR 240 TE+A+ AL++GRASVT+GP + L+++ VY IGD + + D +V V DF R Sbjct: 201 VTEQAVYALAAGRASVTMGPLVTLELHAGKMVYTIGDCMPAHDRSHNHEAV-VEIDFHVR 259 Query: 241 HEHWHLPEQSYTVSLKSNLGVLSEQAAMPEQFPLHAEISVQGLLWMRAELWGVIQGVRTL 300 W PE Y+++L SNLGV+ E+ A PEQ EI GL W+RAEL G +QGVRT+ Sbjct: 260 AGLWEFPEARYSITLMSNLGVIGERHASPEQEQYRFEIPGHGLRWVRAELKGTVQGVRTM 319 Query: 301 IAFTNAIY 308 IAFTNAIY Sbjct: 320 IAFTNAIY 327 >B5YBW8.1 B5YBW8_DICT6 Putative secreted protein Length = 480 Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 94/318 (29%), Positives = 151/318 (47%), Gaps = 52/318 (16%) Query: 1 LDELALGAKALGFDCIALTDHNTMAGLAHKEQIERETGLLIIPGMEWTTFFGHMVTIGIE 60 ++EL + G D I LTDHN ++G IE E I G+E+TTF+GH + +G++ Sbjct: 205 IEELIKFSIKRGLDFIFLTDHNKISGF---HTIEWEF-YPIYGGIEFTTFWGHFLGLGLK 260 Query: 61 DYQDWRKVGPGDIHAGLARVHE----QGGLAGMAHPFRPGSPMCTGCFWEFEIRDWNEID 116 +Y W V P G+ R+ E QGG+ +AHP+ +P+C GC E + D+N +D Sbjct: 261 EYISWDLVNPS---LGIRRLSEMVRSQGGIFCVAHPYTMSAPVCPGCRCEIYL-DYNFVD 316 Query: 117 YIEVWSTTFAPVKKNNIRAYRLWTDKLNEGFRLAATSGRDWHFQERTDAPLSVTYLRIQE 176 IE+W+ +F + + + W + L GFR+ A D H E + V YL +++ Sbjct: 317 AIEIWTGSFERRRFEITESIKRWREILKNGFRVTALGSSDMHKIEDIKEDVPVNYLYVED 376 Query: 177 GEAPFTERAIAALSSGRASVTLGPRLDLQVNVNGEVYQIGDAVSSSDERERLASVKVLAD 236 E + A+ GRA VT GP ++ +N Y IGD+V+ + D Sbjct: 377 LSE---ESILKAIKEGRAYVTSGPEIEFYIN----DYSIGDSVNFDE------------D 417 Query: 237 FTSRHEHWHLPEQSYTVSLKSNLGVL---SEQAAMP--EQFPLHAEISVQGLLWMRAELW 291 + Y +S L ++ E +P ++ H ++ G +++ E W Sbjct: 418 LILK----------YACGRESELRIIYNGDEYIKIPNTKKGAFHLKVKDPGYIYL--EFW 465 Query: 292 GVIQGVRTLIAFTNAIYF 309 +G + LIAFTN IY Sbjct: 466 ---EG-KKLIAFTNPIYL 479 >B8E1K3.1 B8E1K3_DICTD Phosphoesterase PHP domain protein Length = 480 Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 149/317 (47%), Gaps = 50/317 (15%) Query: 1 LDELALGAKALGFDCIALTDHNTMAGLAHKEQIERETGLLIIPGMEWTTFFGHMVTIGIE 60 ++EL + G D I LTDHN ++G IE E I G+E+TTF+GH + +GI+ Sbjct: 205 IEELIKFSIKRGLDFIFLTDHNKISGF---HTIEWEF-YPIYGGIEFTTFWGHFLGLGIK 260 Query: 61 DYQDWRKVGPG-DIHAGLARVHEQGGLAGMAHPFRPGSPMCTGCFWEFEIRDWNEIDYIE 119 +Y W P I RV QGG+ +AHP+ +P+C GC E + D+N +D +E Sbjct: 261 EYIPWDLANPEVGIRKLSERVRSQGGVFCVAHPYTISAPVCPGCRCELYL-DYNFVDAME 319 Query: 120 VWSTTFAPVKKNNIRAYRLWTDKLNEGFRLAATSGRDWHFQE--RTDAPLSVTYLRIQEG 177 VW+ +F + A + W + L G+R+ A G D H E + D PL Y+ Sbjct: 320 VWTGSFEMRRFEITEALKKWRELLKNGYRITALGGSDMHKIEDIKEDVPLVYAYV----- 374 Query: 178 EAPFTERAIAALSSGRASVTLGPRLDLQVNVNGEVYQIGDAVSSSDERERLASVKVLADF 237 E E + A+ GR +T GP+++ +N + IG+ V D +E L Sbjct: 375 EDLSEESILKAIREGRVYITTGPQVEFYIN----GHSIGENV---DFKEDLI-------- 419 Query: 238 TSRHEHWHLPEQSYTVSLKSNLGVL---SEQAAMP--EQFPLHAEISVQGLLWMRAELWG 292 Y+ +S L ++ E +P ++ H ++ G +++ E W Sbjct: 420 -----------LKYSCEKESELKIIYNGDEYIKIPGTKKGAFHLKLKDPGYVYL--EFW- 465 Query: 293 VIQGVRTLIAFTNAIYF 309 +G + LIAFTN IY Sbjct: 466 --EG-KKLIAFTNPIYL 479 >A5V1Q3.1 A5V1Q3_ROSS1 PHP C-terminal domain protein Length = 458 Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 77/214 (35%), Positives = 106/214 (49%), Gaps = 12/214 (5%) Query: 8 AKALGFDCIALTDHNTMAGLAHKEQIERETGLLIIPGMEWTTFFGHMVTIGIEDYQDWR- 66 A+A D +ALTDHNT+A L H I LL++ GME TTF+GH +++G + DWR Sbjct: 175 ARARHLDFVALTDHNTIAQL-HNLDILTTDDLLVMGGMELTTFWGHALSLGTRRWIDWRV 233 Query: 67 KVGPGDIHAGLARVHEQGGLAGMAHPFRPGSPMCTGCFWEFEIRDWNEIDYIEVWSTTFA 126 + G + A V ++GGL +AHP PG P CTGC W + +EVW+ + Sbjct: 234 RTGERSMPQIAADVEKEGGLFVIAHPLAPGDPFCTGCDWRYVDMMPGTARAVEVWNGLWN 293 Query: 127 PVKKNNIRAYRLWTDKLNEGFRLAATSGRDWHFQERTDA--PLSVTY-LRIQEGEAPFTE 183 NN A LW LN G R+ AT+G D H A +V Y R EG Sbjct: 294 -GDSNNEAALALWYQWLNWGLRITATAGTDAHGPAPAGACPGFNVVYATRRDEGA----- 347 Query: 184 RAIAALSSGRASVTLGPRLDLQVNVNGEVYQIGD 217 + A++ GR ++ GP L+L +GD Sbjct: 348 -ILRAIAHGRLYLSSGPALELTGASGTTTGMMGD 380 >A7NHJ5.1 A7NHJ5_ROSCS PHP domain protein Length = 460 Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 95/312 (30%), Positives = 137/312 (43%), Gaps = 28/312 (8%) Query: 2 DELAL--GAKALGFDCIALTDHNTMAGLAHKEQIERETGLLIIPGMEWTTFFGHMVTIGI 59 D LAL A+A D + LTDHNT++ L H + + LL++ GME TTF+GH +++G Sbjct: 169 DILALLEAARARRLDFVTLTDHNTISQLRHIDALTTND-LLVMGGMELTTFWGHALSLGT 227 Query: 60 EDYQDWR-KVGPGDIHAGLARVHEQGGLAGMAHPFRPGSPMCTGCFWEFEIRDWNEIDYI 118 + DWR + + A + ++GGL +AHP PG P CTGC W + + Sbjct: 228 RRWIDWRIRPSERSMPQIAADIEKEGGLFVIAHPLAPGDPYCTGCDWRYVEMMPGTARAV 287 Query: 119 EVWSTTFAPVKKNNIRAYRLWTDKLNEGFRLAATSGRDWHFQERTDAPLSVTYLRIQEGE 178 EVW+ + NN A LW + LN G L AT+G D H Q + + Sbjct: 288 EVWNGLWH-GDSNNEAALALWYEWLNWGLHLTATAGTDAHGQAPPEVRPGFNVVYAAHRN 346 Query: 179 APFTERAIAALSSGRASVTLGPRLDLQVNVNGEVY-QIGDAVSSSDERERLASVKVLADF 237 RAIA GR ++ GP L+L ++GE + IG + Sbjct: 347 ESAILRAIA---HGRLYLSSGPVLEL-TGMSGETHTMIGGTLPRG--------------A 388 Query: 238 TSRHEHWHLPEQSYTVSLKSNLGVLSEQAAMPEQFPLHAEISVQGLLWMRAELWGVIQGV 297 + H W + + L +N LSE A PE + W AE + Sbjct: 389 ATIHARWCDVPANARLRLIANGAQLSEDIATPEG-ERTWNLEEGAAQWCVAE---IRAAD 444 Query: 298 RTLIAFTNAIYF 309 ++A TN IYF Sbjct: 445 GEMLAVTNPIYF 456 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,929,958,326 Number of extensions: 81026766 Number of successful extensions: 171537 Number of sequences better than 1.0e-05: 48 Number of HSP's gapped: 171530 Number of HSP's successfully gapped: 48 Length of query: 310 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 175 Effective length of database: 1,788,859,178 Effective search space: 313050356150 Effective search space used: 313050356150 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)