BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0563.0009.p
         (118 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K459.1 B3K459_9BACI Activator of Hsp90 ATPase 1 family protein      119   9e-26
B1D5C5.1 B1D5C5_9BACL Activator of Hsp90 ATPase 1 family protein      119   1e-25
C0ZJZ1.1 C0ZJZ1_BREBN Putative uncharacterized protein                117   3e-25
Q04VS1.1 Q04VS1_LEPBJ Bi-functional protein, with a transcriptio...    58   3e-07
Q04XP8.1 Q04XP8_LEPBL Bi-functional protein, with a transcriptio...    58   3e-07

>B3K459.1 B3K459_9BACI Activator of Hsp90 ATPase 1 family protein
          Length = 150

 Score =  119 bits (298), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 74/114 (64%)

Query: 2   IRSSFKPGELIEYVGPGAEGDETVHVYGTLLEYTPEKVLSFTHKVGPSYLKDRENYESRI 61
           +RSSF+ GE   YVGPG +G+ETVHVYG +L Y P+K LS +   GPSY  + E  ESRI
Sbjct: 36  LRSSFQVGEPYAYVGPGNDGEETVHVYGNVLAYEPQKTLSLSEHPGPSYYANHEELESRI 95

Query: 62  SWMLEPAGSCTRLTLIHDNWHXXXXXXXXXXXXWWHILSNTKTLAETGRTLDFG 115
           ++ LEP G+CT+LTL++D +             WW ++S  KT AETG TLD G
Sbjct: 96  TFTLEPVGNCTKLTLVNDQYTPDHPSRAKAADSWWMVMSILKTYAETGETLDLG 149


>B1D5C5.1 B1D5C5_9BACL Activator of Hsp90 ATPase 1 family protein
          Length = 149

 Score =  119 bits (297), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 74/115 (64%)

Query: 1   VIRSSFKPGELIEYVGPGAEGDETVHVYGTLLEYTPEKVLSFTHKVGPSYLKDRENYESR 60
           V+ S+ +P    EYVGPGAEG+ TVHVYGT+L+  P K+LS+    GPSY  +    ESR
Sbjct: 34  VLNSTLEPDASFEYVGPGAEGENTVHVYGTILKADPGKMLSYLEHPGPSYRDNHAELESR 93

Query: 61  ISWMLEPAGSCTRLTLIHDNWHXXXXXXXXXXXXWWHILSNTKTLAETGRTLDFG 115
           +++ LE  GSCT+LTL++D W             WW +LSN KT  ETG+TLDFG
Sbjct: 94  VTFTLETVGSCTKLTLVNDQWTLDHPSFANSKEHWWMMLSNIKTYTETGKTLDFG 148


>C0ZJZ1.1 C0ZJZ1_BREBN Putative uncharacterized protein
          Length = 149

 Score =  117 bits (293), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 54/114 (47%), Positives = 73/114 (64%)

Query: 2   IRSSFKPGELIEYVGPGAEGDETVHVYGTLLEYTPEKVLSFTHKVGPSYLKDRENYESRI 61
           IRS+F+ G+ + YVGPG  GD+TVHVYG +L++ P  + SFT   GP+Y ++    +SR+
Sbjct: 35  IRSTFQVGDEMAYVGPGKAGDDTVHVYGKILQFEPHHIFSFTEHPGPAYYENHAELQSRV 94

Query: 62  SWMLEPAGSCTRLTLIHDNWHXXXXXXXXXXXXWWHILSNTKTLAETGRTLDFG 115
           +  LEP G CT+LTLI D W             W  +LS+ KT AETG+TLDFG
Sbjct: 95  TITLEPVGGCTKLTLIQDQWTENHPSHASASNNWPMMLSSIKTYAETGKTLDFG 148


>Q04VS1.1 Q04VS1_LEPBJ Bi-functional protein, with a transcription regulator
           domain
          Length = 264

 Score = 57.8 bits (138), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 6/113 (5%)

Query: 7   KPGELIEYVGPGAEGDETVHVYGTLLEYTPEKVLSFTHKVG--PSYLKDRENYESRISWM 64
           K G  + Y   G +G++   V G +LE+ P+K L++T ++   P   KDR    SR+++ 
Sbjct: 153 KVGAKLTYDIKGQDGNKLSVVEGNVLEFDPQKKLAYTFRLSAEPKATKDR---ASRVTYE 209

Query: 65  LEPAG-SCTRLTLIHDNWHXXXXXXXXXXXXWWHILSNTKTLAETGRTLDFGS 116
           LEP+G    +LT+ HD++             W   LSN KT  ETG+ ++  S
Sbjct: 210 LEPSGPDSVKLTVTHDDFDGKTTTFFGVSQGWPRHLSNLKTYLETGKGMNLPS 262


>Q04XP8.1 Q04XP8_LEPBL Bi-functional protein, with a transcription regulator
           domain
          Length = 264

 Score = 57.8 bits (138), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 6/113 (5%)

Query: 7   KPGELIEYVGPGAEGDETVHVYGTLLEYTPEKVLSFTHKVG--PSYLKDRENYESRISWM 64
           K G  + Y   G +G++   V G +LE+ P+K L++T ++   P   KDR    SR+++ 
Sbjct: 153 KVGAKLTYDIKGQDGNKLSVVEGNVLEFDPQKKLAYTFRLSAEPKATKDR---ASRVTYE 209

Query: 65  LEPAG-SCTRLTLIHDNWHXXXXXXXXXXXXWWHILSNTKTLAETGRTLDFGS 116
           LEP+G    +LT+ HD++             W   LSN KT  ETG+ ++  S
Sbjct: 210 LEPSGPDSVKLTVTHDDFDGKTTTFFGVSQGWPRHLSNLKTYLETGKGMNLPS 262


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.135    0.430 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 694,412,553
Number of extensions: 24303803
Number of successful extensions: 50137
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 50146
Number of HSP's successfully gapped: 5
Length of query: 118
Length of database: 3,060,696,203
Length adjustment: 84
Effective length of query: 34
Effective length of database: 2,269,330,943
Effective search space: 77157252062
Effective search space used: 77157252062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)