BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0562.0003.p (220 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6CI32.1 A6CI32_9BACI Putative phosphatidylethanolamine N-methyl... 206 1e-51 B8GMY3.1 B8GMY3_THISH Methyltransferase type 11 135 4e-30 Q7NPW4.1 Q7NPW4_CHRVO Probable phosphatidylethanolamine N-methyl... 122 2e-26 C1D659.1 C1D659_LARHH Probable phosphatidylethanolamine N-methyl... 119 2e-25 A3VLI8.1 A3VLI8_9RHOB Phosphatidylethanolamine N-methyltransferase 118 3e-25 >A6CI32.1 A6CI32_9BACI Putative phosphatidylethanolamine N-methyltransferase Length = 212 Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 101/204 (49%), Positives = 145/204 (71%), Gaps = 1/204 (0%) Query: 16 MNNSWNRIIYKLWAPLYDRVFNSGAFAGARKKALSGLDLKPGQQVLLVGAGTGADLPLIS 75 MN++WN+IIYK+W+P+YD++FN G F ARKK +GL+L G +VL VG GTGADL + Sbjct: 1 MNSTWNKIIYKVWSPIYDQLFNRGLFLDARKKVFTGLELPKGSKVLFVGIGTGADLEFFN 60 Query: 76 GRGLSITAIDLSPAMLAEARSKIKEGEKITFLEMDAQDLRFGDETFDVVIANLILSVVPD 135 R L +TAID S ML AR K K I F++MDAQD+ F D++FD ++A+LILSVVPD Sbjct: 61 DRLLDLTAIDFSSDMLKIARGKYKNSN-IDFVQMDAQDINFPDDSFDFIVASLILSVVPD 119 Query: 136 AERCMQEIVRVTSHGGKIVIFDKFASNGRVSPVMKVMRPLISVLGTDIGRDFNLLFLPYN 195 + +QE+ RV +GG I+IFDKF+SN + K++RP+I VLGTDIG + L + Sbjct: 120 PLKSLQEMNRVLKNGGSILIFDKFSSNKSGFYLTKILRPVIKVLGTDIGINHWELISKMD 179 Query: 196 EQLSMKEESPLLMRGMYRKIVLKK 219 L ++++ P+++ GMYRK++++K Sbjct: 180 GALRIQKDDPVMLNGMYRKLLVEK 203 >B8GMY3.1 B8GMY3_THISH Methyltransferase type 11 Length = 200 Score = 135 bits (339), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 4/196 (2%) Query: 25 YKLWAPLYDRVFNSGAFAGARKKALSGLDLKPGQQVLLVGAGTGADLPLISGRGLSITAI 84 Y LWAP+YD +F A G R+++L+ L GQ++LL G GTG DLP + G + Sbjct: 7 YTLWAPIYD-LFVDRALRGPRRRSLARLGEVAGQEILLPGIGTGLDLPYLPAGG-RYHGV 64 Query: 85 DLSPAMLAEARSKIKE-GEKITFLEMDAQDLRFGDETFDVVIANLILSVVPDAERCMQEI 143 DL+PAMLA ARS+ + G +I E DA L F ++ FD V+ +LIL+VVP+ R E Sbjct: 65 DLTPAMLARARSRADQLGIEIGLHEGDAMALPFENDRFDAVVLHLILAVVPEPARAFAEA 124 Query: 144 VRVTSHGGKIVIFDKFASNGRVSPVMKVMRPLISVLGTDIGRDFNLLFLPYNEQLSMKEE 203 VRV G +++I DKF G+ +P+ +++ P+IS L T F L ++E L + E+ Sbjct: 125 VRVARPGARLLILDKFLRPGQRAPLRRMINPVISRLATRTDVIFEELLAGHDE-LRLVED 183 Query: 204 SPLLMRGMYRKIVLKK 219 +P L G +R +VL K Sbjct: 184 TPALAGGWFRHLVLDK 199 >Q7NPW4.1 Q7NPW4_CHRVO Probable phosphatidylethanolamine N-methyltransferase EC=2.1.1.17 Length = 205 Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/171 (40%), Positives = 106/171 (61%), Gaps = 5/171 (2%) Query: 17 NNSWNRIIYKLWAPLYDRVFNSGAFAGARKKALSGLDLKPGQQVLLVGAGTGADLPLISG 76 + +NR Y L+AP+YD+V + FA R++A+ L+ +P ++VLLVGAGTG DL + Sbjct: 6 STRFNRWRYDLYAPVYDKV--AQGFARHRRRAIGLLNPQPDERVLLVGAGTGLDLDFLV- 62 Query: 77 RGLSITAIDLSPAMLAEARSKI-KEGEKITFLEMDAQDLRFGDETFDVVIANLILSVVPD 135 R + AID++PAMLA R + K G ++ MD Q L F D +FD V +L+L+V+PD Sbjct: 63 RCRRVAAIDIAPAMLARLRERAGKLGMEVDARVMDGQRLDFPDGSFDAVALHLVLAVIPD 122 Query: 136 AERCMQEIVRVTSHGGKIVIFDKFASNGRVSPVM-KVMRPLISVLGTDIGR 185 C+ E+ RV GG++V+FDKF ++G+ P+ + L + TDI R Sbjct: 123 PRACLLEVERVLKPGGRVVVFDKFLADGKRPPLWRRAGNALARAVATDINR 173 >C1D659.1 C1D659_LARHH Probable phosphatidylethanolamine N-methyltransferase EC=2.1.1.17 Length = 235 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 103/168 (61%), Gaps = 5/168 (2%) Query: 20 WNRIIYKLWAPLYDRVFNSGAFAGARKKALSGLDLKPGQQVLLVGAGTGADLPLISGRGL 79 WNR+ Y +A +YDR F R ++L+ ++PG++VLLVGA TG DL L+ R Sbjct: 8 WNRLRYNAYAAIYDR--PGRFFTPCRARSLALAAIRPGERVLLVGAATGLDLELLP-RQA 64 Query: 80 SITAIDLSPAMLAEARSKIKE-GEKITFLEMDAQDLRFGDETFDVVIANLILSVVPDAER 138 + AID +PAM+ + +E + MDAQ + + D++FDVV+ +LIL+VVPD Sbjct: 65 DVCAIDYAPAMVERLILRARELAFPVDARVMDAQAMEYPDDSFDVVVLHLILAVVPDPLA 124 Query: 139 CMQEIVRVTSHGGKIVIFDKFASNG-RVSPVMKVMRPLISVLGTDIGR 185 C++E+ RV GG++V+FDKF +G + S + + L +VL TDI R Sbjct: 125 CIREVERVLRPGGRVVVFDKFLPDGAQASLPRRALNLLTTVLATDINR 172 >A3VLI8.1 A3VLI8_9RHOB Phosphatidylethanolamine N-methyltransferase Length = 205 Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 78/200 (39%), Positives = 117/200 (58%), Gaps = 9/200 (4%) Query: 25 YKLWAPLYDRVFNSGAFAGARKKALSGLDLKPGQQVLLVGAGTGADLPLISGRGLSITAI 84 Y WAP+YDR F + G R++A++ ++ G+ VL VG GTG LP L +T I Sbjct: 10 YARWAPVYDRTFGAITNTG-RRRAVAFVNGLSGR-VLEVGVGTGLALPHYRP-DLEVTGI 66 Query: 85 DLSPAMLAEARSKIKE---GEKITFLEMDAQDLRFGDETFDVVIANLILSVVPDAERCMQ 141 D S MLA+AR+K+++ + +MDA+ L F D +FD V+A +LSVVPD E+ M Sbjct: 67 DFSDEMLAKARAKVRDMGLNHVVDLRQMDARTLDFPDASFDTVVAMHVLSVVPDPEKVMS 126 Query: 142 EIVRVTSHGGKIVIFDKFA-SNGRVSPVMKVMRPLISVLGTDIGRDFNLLFLPYNEQLSM 200 EI RV GG +VI + F +G ++ V +V PL +VLG DF + + + L++ Sbjct: 127 EIARVCKPGGHVVITNHFKRDDGLLAMVERVAAPLSNVLGWH--SDFEIETVLQEDDLAV 184 Query: 201 KEESPLLMRGMYRKIVLKKN 220 +E+ PL GM +VL+K+ Sbjct: 185 EEKRPLPPMGMMTFLVLRKS 204 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,295,206,094 Number of extensions: 53710049 Number of successful extensions: 154545 Number of sequences better than 1.0e-05: 1211 Number of HSP's gapped: 156991 Number of HSP's successfully gapped: 1211 Length of query: 220 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 90 Effective length of database: 1,835,964,253 Effective search space: 165236782770 Effective search space used: 165236782770 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 128 (53.9 bits)