BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0560.0027.p (418 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I974.1 B8I974_CLOCE Glycosyltransferase, MGT family 282 5e-74 C2XKV7.1 C2XKV7_BACCE Glycosyltransferase, MGT 242 5e-62 Q736S5.1 Q736S5_BACC1 Glycosyltransferase, putative 240 2e-61 B8I5C7.1 B8I5C7_CLOCE Glycosyltransferase, MGT family 239 3e-61 C3ELP4.1 C3ELP4_BACTK Glycosyltransferase 237 1e-60 >B8I974.1 B8I974_CLOCE Glycosyltransferase, MGT family Length = 417 Score = 282 bits (721), Expect = 5e-74, Method: Compositional matrix adjust. Identities = 145/414 (35%), Positives = 226/414 (54%), Gaps = 4/414 (0%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 MSKVIFL Y F H+ P+ IYYS + + +E TGA FRDYG I Sbjct: 1 MSKVIFLGYLFQGHINPTLGLVNELVNRGEEVIYYSGKEFCKKIEATGAKFRDYGFIQDP 60 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 E+ Q +D +V + K+++ I + + AD PDYI+ D +A+WG+ Sbjct: 61 SESNKTQ----KVQGNLDAFAQVVTWVLNVGKQIISNISSEIEADRPDYIIHDSQAFWGK 116 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLDHIAA 180 + L +P V I + AL +M+DI+ + F+E++ M SL +K ++ ++LD ++ Sbjct: 117 RIAGSLGIPAVSSIASFALTGKMLDIDPDFFIENMLRMPNASLFAKKKSNIVRLLDLLSR 176 Query: 181 GIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKTDFP 240 I+ + + D + NIVYTS FQPY E F D++ F+G S+ E DFP Sbjct: 177 RISAAYDEPDFNIYDFANNTGKLNIVYTSEYFQPYGEVFDDSFKFVGHSIFKRTENVDFP 236 Query: 241 FQKEADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPANFV 300 F K P++ IA G + N L+ Y+ C AF D V++SVG VD+ LG +P NF+ Sbjct: 237 FDKLGSLPLIYIALGTVRTNRLDFYRECFSAFGDMEIQVVLSVGTNVDVYQLGKIPDNFI 296 Query: 301 VANQVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAGVY 360 V N VPQ+E++ VF++HGG NS++E + N+VPL+++PQG D + R+E GAG+Y Sbjct: 297 VRNYVPQLEILKYASVFITHGGTNSVNEGLYNNVPLIVYPQGDDNHIVAGRVENLGAGIY 356 Query: 361 VRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISE 414 ++N +I+ EL + V + ++ N + + D+ + +GG D I F E Sbjct: 357 LKNDDINAEELKNAISRVLSDENFKINSKAIGDTLKTAGGYLRAVDEIFKFKGE 410 >C2XKV7.1 C2XKV7_BACCE Glycosyltransferase, MGT Length = 401 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 136/418 (32%), Positives = 226/418 (54%), Gaps = 24/418 (5%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 MSKV+F+++P HV PS IYY +E Y+D +E+TGA FR Y + + Sbjct: 1 MSKVLFINFPGEGHVNPSIGIVSDLIQRGEQIIYYCIEDYRDKIEKTGAEFRTYENFMPK 60 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 + TD A +D+L++++ + ++++ I++ + + DY++ D G Sbjct: 61 RDINTDVKQKA---NQLDMLFNMISA----MDRIIKDILSEIEGEQFDYVIYDHHFAVGY 113 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKE--GFMESVFSMSADSLPVAEKESVSQVLDHI 178 ++ + L +P + TT A N+ + K+ G+ ++ + + + K Sbjct: 114 IIASALQLPKISSCTTFAFNDSISLFGKDNSGYSGGNAPLNKNCIDIINK---------- 163 Query: 179 AAGIAKEQ-GVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKT 237 KEQ GV + D L+ + IVYTS+E+QPYA F D+++F+GPS+ + Sbjct: 164 ----WKEQYGVMYDSFPDILSNPGDITIVYTSKEYQPYANEFDDSFIFVGPSITPRHDVG 219 Query: 238 DFPFQKEADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPA 297 DFP + ++ V+ I+ G I N LY++C EAF+D +++++VGKK DI +VP Sbjct: 220 DFPIEDLKNKKVIFISMGTIVNQQQTLYEKCFEAFKDIPATIVLAVGKKTDIEQFKNVPP 279 Query: 298 NFVVANQVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGA 357 NF++ VPQ+E++ DVF++HGG NS SEA+ VPLV+ P DQ + R+ E GA Sbjct: 280 NFILYKYVPQLEVLKHTDVFITHGGMNSSSEALYYGVPLVVIPISGDQPLVAKRVTELGA 339 Query: 358 GVYVRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISEA 415 GV++ ++P L E E V E++ N K+ +SFR++GG K D IL +S+ Sbjct: 340 GVHLDKTSLTPEILREETEAVLYRKEFKENSCKIRNSFRMAGGYKKAVDEILHVLSKT 397 >Q736S5.1 Q736S5_BACC1 Glycosyltransferase, putative Length = 397 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/414 (29%), Positives = 222/414 (53%), Gaps = 17/414 (4%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 M++V+F++ H+ P+ +Y+S+EA+++ +E+TGA+ R D + Sbjct: 1 MARVLFINTGSEGHINPTLQVVEELVSRGEEVVYFSIEAFRERIEKTGAIVRTIDDQRFI 60 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 + NY L + + + V+ ++ ++ ++ DYI+ D GR Sbjct: 61 KAFLSGGRNY---------LQERINGLLYTADVVISSVLEQIEGEHFDYIIHDSMFGCGR 111 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLDHIAA 180 L+ IL +P + T+ A + R E + + ++PV ++++ + + Sbjct: 112 LIAQILKLPAINSCTSFAQDERSF--------EQMLDHLSKNIPVEVQDNIHNDFERLTK 163 Query: 181 GIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKTDFP 240 GI+++ GVE + + IVYT +EFQP+ +TF + Y F+GPS+ A + DF Sbjct: 164 GISEKYGVEINSPYEVFCNPAPLTIVYTVKEFQPFGDTFNETYKFVGPSISAQVKNEDFD 223 Query: 241 FQKEADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPANFV 300 F ++ + I+ G +FN L+ YK CM+AF ++ +++MS+G K +IS LG++P NF+ Sbjct: 224 FTSIEEKCPIYISLGTVFNEALDFYKLCMKAFENSDHTIVMSIGNKTNISDLGEIPKNFI 283 Query: 301 VANQVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAGVY 360 V N VPQ +L++ +F++HGG NS E ++N +PL++ PQ ADQ + ++E G G+ Sbjct: 284 VKNYVPQTKLLAYTKLFITHGGMNSTHEGLNNGIPLIVIPQSADQPVIAKQVENLGVGIK 343 Query: 361 VRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISE 414 + +E++ +L E+VE V N Y+ L +SFR SGG K + I FI + Sbjct: 344 LSMKELTVEQLRESVELVLNNPSYKEAALHLKESFRKSGGYKEATNEIFTFIGQ 397 >B8I5C7.1 B8I5C7_CLOCE Glycosyltransferase, MGT family Length = 398 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 131/419 (31%), Positives = 230/419 (54%), Gaps = 27/419 (6%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 MSKV F S PF HV P IYY +E++++ +E +GAVFR YG+ L Sbjct: 1 MSKVFFFSIPFCGHVNPGVGLARELVEKGEEVIYYCIESFREKIESSGAVFRSYGNKFYL 60 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 + N +++ S+ ++++++N + D PDYI+ D + WG+ Sbjct: 61 NDDFVTHNNIEILRVHLEL-----------SEIIMEQLLNDIKRDKPDYIIHDFMSTWGK 109 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLD--HI 178 ++P V TT+ EGF+++ A + + + ++ +++D I Sbjct: 110 HAAQASNIPAVNIYTTLVER-------PEGFLKTAGLFLAVAFQILK--NIPRMIDICKI 160 Query: 179 AAGIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGP-SVRASKEKT 237 + K+ ++ +++D + + ++V+TSR+FQPYAE FGD Y F GP S+ +++ Sbjct: 161 TRRL-KKYNIKVKSLIDIIDNNEALSLVFTSRKFQPYAEKFGDEYKFTGPVSMHRNEKIK 219 Query: 238 DFPFQKEADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPA 297 DF + A R +L I+ G +FNN + +C++AF + + MSVGKK+DIS L +P Sbjct: 220 DFRVNRSAGRSLLFISLGTVFNNDRNFFTQCIKAFGNMDIDIFMSVGKKIDISSL-TIPE 278 Query: 298 NFVVAN--QVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEET 355 NF V ++PQ+E++ + DVF++HGG NS+ E + N +PL++ PQ +Q + R+ ET Sbjct: 279 NFTVKYFFEIPQLEVLKECDVFITHGGMNSVHEGLMNGIPLIVVPQQLEQTHMAKRVAET 338 Query: 356 GAGVYVRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISE 414 G+G+Y+ E++P L ++ + + + Y +N EK+ +SF +GG K + I ++I E Sbjct: 339 GSGIYLDMSEVTPESLKKSYKKIISDGSYSKNAEKMKNSFLNAGGPKRAVEEIFSYIKE 397 >C3ELP4.1 C3ELP4_BACTK Glycosyltransferase Length = 400 Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 126/414 (30%), Positives = 216/414 (52%), Gaps = 17/414 (4%) Query: 1 MSKVIFLSYPFYSHVIPSXXXXXXXXXXXXXXIYYSVEAYKDAVEETGAVFRDYGDIIGL 60 M++V+F++ H+ P+ +Y+S+EA++D +E+TGA R D + Sbjct: 4 MARVLFINAGSEGHINPTLQVVEELISRGEEVVYFSIEAFRDRIEKTGATVRTIDDQKFI 63 Query: 61 LEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGR 120 + NY L + + + V+ ++ ++ ++ DY++ D G Sbjct: 64 KAFLSGGRNY---------LQERINGLLHTADIVISSVLEQIEGEHFDYMIHDSMFGCGH 114 Query: 121 LLGNILDVPVVCYITTVALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLDHIAA 180 L+ IL +P + T+ A + + E + + ++PV + + ++ Sbjct: 115 LIAQILKLPAINSCTSFAQDEKSF--------EQMLGHLSKNIPVEIHDKIQNDFQNLTK 166 Query: 181 GIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKTDFP 240 GIA++ GVE + + IVYT +EFQP+ +TF + Y F+GPS+ A + D Sbjct: 167 GIAEKYGVEIKSSYEVFCNPAPLTIVYTIKEFQPFGDTFDETYKFVGPSISAQMKNRDVD 226 Query: 241 FQKEADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPANFV 300 F ++ + I+ G +FN ++ YK CM+AF ++ +++MS+G K IS LG++P NF+ Sbjct: 227 FTSIEEKSPIYISLGTVFNEAIDFYKLCMKAFENSEHTIVMSIGNKTKISDLGEIPKNFI 286 Query: 301 VANQVPQVELMSQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAGVY 360 V N VPQ EL++ +F++HGG NS E + N VPLV+ PQ ADQ A + ++E GAGV Sbjct: 287 VKNYVPQTELLTYTKLFITHGGMNSTHEGLYNGVPLVVIPQSADQPAIAKQVESLGAGVQ 346 Query: 361 VRNQEISPVELLETVEGVYKNSEYRRNCEKLADSFRLSGGAKLGADAILAFISE 414 + E++ +L E+VE + N Y+ L +SFR SGG K D I F+ + Sbjct: 347 LHMNELTVEKLRESVELILNNPSYKEAALNLKESFRTSGGYKEAVDEIFTFVGQ 400 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,333,844,434 Number of extensions: 96808504 Number of successful extensions: 244944 Number of sequences better than 1.0e-05: 635 Number of HSP's gapped: 245016 Number of HSP's successfully gapped: 636 Length of query: 418 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 280 Effective length of database: 1,760,596,133 Effective search space: 492966917240 Effective search space used: 492966917240 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)