BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0560.0013.p (490 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZJT6.1 C0ZJT6_BREBN Putative uncharacterized protein 310 2e-82 A4J7U6.1 A4J7U6_DESRM Putative uncharacterized protein 228 1e-57 B3K6L9.1 B3K6L9_9BACI Putative uncharacterized protein 153 4e-35 A6LWB0.1 A6LWB0_CLOB8 Putative uncharacterized protein 142 6e-32 C2TFC9.1 C2TFC9_BACCE Putative uncharacterized protein 114 3e-23 >C0ZJT6.1 C0ZJT6_BREBN Putative uncharacterized protein Length = 454 Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 183/486 (37%), Positives = 261/486 (53%), Gaps = 45/486 (9%) Query: 1 MNKSALSALLGLTVLVAGCSTMKTPSDLLMAPSQGSADGTITSIVQPYLPAGAHLTVPVQ 60 M K+ L LV+GC TP++L+ APS +I V +LPAG+ L+VP+ Sbjct: 1 MKKAWLVTTALCASLVSGCGLTDTPNELMRAPSADGDQKSINQAVMQFLPAGSQLSVPLH 60 Query: 61 SESSSAIQLQDLDKDGQEEILAFYKTDKTGYEINALVLSKTGGEWKKLINITGVGSELDY 120 +SA+ LQDL+ DG E++AFYKT+KT YEI LVL++ G W+KL + TGVGSELDY Sbjct: 61 PAEASAVSLQDLNGDGVAEVVAFYKTEKTDYEIGVLVLTQKQGNWEKLSSFTGVGSELDY 120 Query: 121 VKYADVTGDGAADVLLGFSGGEGLGRELSVYSLSGGQLSEILKQPYDYLAVGDMTDEGKT 180 V + D+TGD ++L+G GGE L +ELSVYSL+ E++KQPY +AVGD+T + + Sbjct: 121 VSFQDLTGDKIPEMLIGMGGGEDLNKELSVYSLANNMTQELMKQPYTIMAVGDLTGDNQE 180 Query: 181 DIALIHSTVDGDNQPESHLQLLRLQGGKMQSLSDQNISGMV---IQXXXXXXXXXXXXLI 237 D+AL+ V N S +L G + ++ + G V Q L Sbjct: 181 DLALV---VLDKNNFTSKAELYGAANGTIAKKTELALDGYVNGYYQAIIGKASPTRNGLF 237 Query: 238 IDAAIGAHSSYTSLLTWANGSFTDILASDDYQHPALADSKNLVLKPLAPEPGGLLGEHSM 297 IDA +GAHS+ T LL W NG ++ LA + GE + Sbjct: 238 IDAGLGAHSASTELLLWDNGQLSNPLAK-------------------------IEGEMDL 272 Query: 298 AIKDYPLYSEDVNGDGIVEIGFLVPPAGAESFAPLATPFITKYYQWDGQTGLKLVQEQFD 357 K Y L SED+NGDGI+EIG + PAG E A P+++ Y+QWDG+TGLK +++ + Sbjct: 273 TFKPYSLESEDINGDGIIEIGTKIQPAGTEDLAMAEIPWVSSYFQWDGKTGLKHIEDHYQ 332 Query: 358 RW--GFNFHIPASWTGKYLLDLTGNESPAPWEHISFSYKDANSGEKAQLLELRLLAKKDW 415 + GF+ IPA W KY + + + +P + F Y AN KA+LL L+ + + +W Sbjct: 333 NYSQGFDLKIPAKWGEKYTISINHDTNPL---LVRFQYYGANGKNKAELLTLQSIPQNEW 389 Query: 416 QTAEAQLIAAKASYKLLYELQNTSDETAPTVFVAVLPSANAGRKLTRPAAQEYEQLKLTL 475 E+ L + Y LL E V +A+LP L + A EY ++LT Sbjct: 390 IKFESGLKQKQVPYILL-------KEEGKQVLIAILPQTTP--TLGKAALAEYRSMQLTA 440 Query: 476 EEVRQL 481 EE+RQL Sbjct: 441 EEIRQL 446 >A4J7U6.1 A4J7U6_DESRM Putative uncharacterized protein Length = 450 Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 142/486 (29%), Positives = 242/486 (49%), Gaps = 58/486 (11%) Query: 3 KSALSALLGLTVLVAGCSTMKTPSDLLMAPSQGSADGTITSIVQPYLPAGAHLTVPVQSE 62 KS ++ALL ++ L+ GC+ M++P +LL PS + + + +LP G+ T+P++ Sbjct: 6 KSGITALL-ISSLLTGCNFMQSPMELLKQPSMDVSQAEMKRAAEQFLPTGSQFTIPLKPS 64 Query: 63 SSSAIQLQDLDKDGQEEILAFYKTDKTGYEINALVLSKTGGEWKKLINITGVGSELDYVK 122 + + + DLD DG +E+LAFYK + GYE+ AL+L K G+W+ +I G+G +DY Sbjct: 65 GTGSFRQADLDGDGSKELLAFYKNLQAGYEMGALILKKEDGKWQLQDHIKGLGQSIDYGD 124 Query: 123 YADVTGDGAADVLLGFSGGEGLGRELSVYSLSGGQLSEILKQPYDYLAVGDMTDEGKTDI 182 DVTGD ++L+G+SG +G +EL +YS + I + Y+ + GD+ ++GK ++ Sbjct: 125 LQDVTGDKKPELLVGWSGADGYEKELEIYSFQDKKAKRIGQYTYNSFSTGDLDEDGKAEL 184 Query: 183 ALIHSTVDGDNQPESHLQLLRLQGGKMQSLSDQNI-----SGMVIQXXXXXXXXXXXXLI 237 A++ + P + L L + G+++ + +G+VI + Sbjct: 185 AVLFR--NNKEIPSAELHLYQAVSGELKQTAKLEYEGGYPAGVVI----GQASKDRKGIF 238 Query: 238 IDAAIGAHSSYTSLLTWANGSFTDILASDDYQHPALADSKNLVLKPLAPEPGGLLGEHSM 297 +D GAHS+ T L+ N + ++ + S Sbjct: 239 VDIGEGAHSAVTQLVFLENNTLRNVFS------------------------------QSR 268 Query: 298 AIKDYPLYSEDVNGDGIVEIGFLVPPAGAESFAPLATPFITKYYQWDGQTGLKLVQEQFD 357 K Y L SEDV+ DG++EIG + P G E A P++ ++Y+WDG+ GL V E++ Sbjct: 269 TFKPYSLPSEDVDKDGVMEIGIMYEPPGTEQMAMAEIPWVNRWYKWDGKDGLLPVLEEYS 328 Query: 358 RW--GFNFHIPASWTGKYLL-DLTGNESPAPWEHISFSYKDANSGEKAQLLELRLLAKKD 414 + G+ F IP +W GK+ + ++ N P + + F Y A+LL L ++ + Sbjct: 329 NYIFGYRFIIPQNWIGKFTVKEIEDN----PEKGVEFDYIGKGKMPLAKLLTLHIVPQNK 384 Query: 415 WQTAEAQLIAAKASYKLLYELQNTSDETAPTVFVAVLPSANAGRKLTRPAAQEYEQLKLT 474 WQ E + ++A Y +L E VFV V P KL+ QEY++L L Sbjct: 385 WQEQEKEFKKSQAPYIVL-------GEKGQMVFVGVFPEKE--NKLSGKPLQEYQELLLK 435 Query: 475 LEEVRQ 480 E+V++ Sbjct: 436 QEQVKE 441 >B3K6L9.1 B3K6L9_9BACI Putative uncharacterized protein Length = 444 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 118/446 (26%), Positives = 201/446 (45%), Gaps = 71/446 (15%) Query: 1 MNKSALSALLG--LTVLVAGCSTMKTPSDLLMAPS----QGSADGTITSIVQPYLPAGAH 54 M + ALL L +++GC+ ++ P L+ P + + +G I S +Q Sbjct: 1 MKYRVMQALLAGLLLFIISGCTFIQDPVSLMKRPDLPTDKATLNGAIQSALQKIKLDNGA 60 Query: 55 LTVPVQSESSSAIQLQDLDKDGQEEILAFYKTDKTGYEINALVLSKTGGEWKKLINITGV 114 + P SS+I++ DLD DG E + FY+T +I+ +++ + G W K ++ G Sbjct: 61 IIRPRSDVDSSSIRIHDLDNDGVMEAVVFYQTPDEEVKIHGMIMQQQGDTWVKSLDFDGE 120 Query: 115 GSELDYVKYADVTGDGAADVLLGFSGG-EGLGRELSVYSLSGGQLSEILKQPYDYLAVGD 173 G+ L+ + D T DG D++ GFS G E L L+VYS SG L +I PY + +GD Sbjct: 121 GTVLESFDFVDFTNDGKVDIVAGFSRGEENLQNLLAVYSFSGDSLEKIPALPYTHFNIGD 180 Query: 174 MTDEGKTDIALIH---------STVDGDNQPESHLQLLRLQGGKMQSLSDQNISGMVIQX 224 M + DI +++ ST D ++ ++L +L G ++G V + Sbjct: 181 MNGDKVKDITVVYLQQKELSYISTYQYDKFEDAFVELNKLDLGPNIESYYNVVAGKVAK- 239 Query: 225 XXXXXXXXXXXLIIDAAIGAHSSYTSLLTWANGSFTDILASDDYQHPALADSKNLVLKPL 284 +I+DA++ ++SSY+ L+ + F D+L Sbjct: 240 -------NKEGIILDASVVSNSSYSKLIIMEDNKFIDVLQ-------------------- 272 Query: 285 APEPGGLLGEHSMAIKDYPLYSEDVNGDGIVEIGFLVPPAGAESFAPL-ATPFITKYYQW 343 + + K+ P+ SEDVN DGI+E G L P+G E L PF T Y+QW Sbjct: 273 ---------DELLTYKELPVESEDVNDDGILEFGVLTRPSGWEDRLILDEIPFFTTYFQW 323 Query: 344 DGQT-------GLKLVQEQFDRWGFNFHI--PASWTGKYLLDLTGNESPAPWEHISFSYK 394 DG+ GL+ V +++ F++ P K + N++ +++F Sbjct: 324 DGEVRESNEVEGLQFVLQRYYDMNNRFYLDFPPDMYNKITITPESNKNA----YLNFVMT 379 Query: 395 DANSGEKAQLLELRLLAKKDWQTAEA 420 D +GE + E++ + W AE+ Sbjct: 380 D--TGE--SVAEIKFFSTAQWGKAES 401 >A6LWB0.1 A6LWB0_CLOB8 Putative uncharacterized protein Length = 417 Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 38/362 (10%) Query: 17 AGCSTMKTPSDLLMAPS-QGSADGTITSIVQPYLPAGAHLTVPVQSESSSAIQLQDLDKD 75 GC + + L+ AP + + I ++ L + VP S+ +I + D+DKD Sbjct: 19 TGCGNVVNTTSLIQAPMLENVEENKINKELKEILTPESEFLVPKNSQEKQSIFIDDVDKD 78 Query: 76 GQEEILAFYKTDKTGYEINALVLSKTGGEWKKLINITGVGSELDYVKYADVTGDGAADVL 135 G+ E Y+ K +++ L+L + +W K++++ + LDY D+ GDG +V+ Sbjct: 79 GKNEAFVLYRDMKENRQVHLLMLKEENEKWNKVLDVATNFNILDYFTLKDLDGDGKKEVI 138 Query: 136 LGFSGGEG-LGRELSVYSLSGGQLSEILKQPYDYLAVGDMTDEGKTDIALIHSTVDGDNQ 194 LG S + L ++L +Y L+G +L + + Y+++ + D ++ K D+ +I DG+ Sbjct: 139 LGTSVSDSELSKQLFIYELNGKELVNKVNRTYEWIDISDCNEDKKPDVIII----DGEIG 194 Query: 195 PESHLQLLRLQGGKMQS--LSDQNISGMVIQXXXXXXXXXXXXLIIDAAIGAHSSYTSLL 252 ++ + +++S N G++ L ID+A+GAHS T ++ Sbjct: 195 KSKTAEMFNYENNQLKSHTFVGLNPEGVIENVVSGKLADGNNALFIDSALGAHSMLTEIV 254 Query: 253 TWANGSFTDILASDDYQHPALADSKNLVLKPLAPEPGGLLGEHSMAIKDYPLYSEDVNGD 312 T G F I E G+L K YPLYS D+N D Sbjct: 255 TCYKGRFIKI----------------------GDENDGIL------FKAYPLYSRDINND 286 Query: 313 GIVEIGFLVPPAGAESFAPLATPFITKYYQWDGQTGLKLVQEQFDRWGFNFH--IPASWT 370 GI+++G + P G E A PFI Y + ++V+E++ +F+ IP+ W Sbjct: 287 GIIDVGGMYIPKGFEDAAMAEIPFIYTYSDYKEDGTHEIVEERYTDSVQHFYITIPSKWH 346 Query: 371 GK 372 GK Sbjct: 347 GK 348 >C2TFC9.1 C2TFC9_BACCE Putative uncharacterized protein Length = 425 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 99/428 (23%), Positives = 177/428 (41%), Gaps = 55/428 (12%) Query: 9 LLGLTVLVAGCSTMKTPSDLLMAPSQGSADGTITSIVQPYLPAGAHLTVPVQSESSSAIQ 68 ++G+ ++ GC + P++L+ AP+ + + LP L P+ ++ I Sbjct: 17 IMGIIFILTGCKMSEAPTNLMEAPANEKWINELKEQIDKDLPVNYRLLTPMSNKDKQMIW 76 Query: 69 LQDLDKDGQEEILAFYKTDKTGYEINALVLSKTGGEWKKLINITGVGSELDYVKYADVTG 128 D +D ++E + FYK + + V K G WK G ++D V+ D TG Sbjct: 77 SMDFKQDNKKEAIIFYKLPNADHSVYLAVYEKNGNGWKTKSTHKFNGGDVDIVEVGDFTG 136 Query: 129 DGAADVLLGFS-GGEGLGRELSVYSLSGGQLSEILKQPYDYLAVGDMTDEGKTDIALIHS 187 +G ++L+G S E L + V+S + EI + Y L + D+ G D++L+ Sbjct: 137 NGKRELLIGISVDRESLKHVMYVFSEENEDMREIYNRNYTKLFIDDLNKNGLKDLSLV-- 194 Query: 188 TVDGDNQPESHLQLLRLQGGKMQSLSDQNISGMV--IQXXXX-XXXXXXXXLIIDAAIGA 244 T + D +L+ + ++LS+ + + IQ ++IDA +GA Sbjct: 195 TYEKDE------KLIVEFIEQFKTLSEASFDPFINSIQRIQMGRISKSLKAIVIDAGVGA 248 Query: 245 HSSYTSLLTWANGSFTDILASDDYQHPALADSKNLVLKPLAPEPGGLLGEHSMAIKDYPL 304 HS T + + + ++L D G+ + +Y + Sbjct: 249 HSGITYVAKFDENHY-EVLPID--------------------------GKEDL-FNEYVV 280 Query: 305 YSEDVNGDGIVEIGFLVPPAGAESFAPLATPFITKYYQWDGQTGLKLVQEQF--DRWGFN 362 S+DVN DGI+E V P G E +P +Y QW ++G+K ++E++ G+ Sbjct: 281 ESKDVNEDGIIEFVRTVRPKGWEDKPHGDSPLFERYIQW-SESGIKPIEERYIDIEKGYY 339 Query: 363 FHIPASWTGKYLLDLTGNESPAP--WEHISFSYKDANSGEKAQLLELRLLAKKDWQTAEA 420 IP GK + ES + WE + LE+ + +KDW + Sbjct: 340 VKIPKELIGKITISDEQKESNSQKFWE----------TSTNETWLEVHIFKRKDWFKIKG 389 Query: 421 QLIAAKAS 428 A K + Sbjct: 390 YEAAVKTA 397 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.132 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,989,647,754 Number of extensions: 131981602 Number of successful extensions: 261788 Number of sequences better than 1.0e-05: 72 Number of HSP's gapped: 261625 Number of HSP's successfully gapped: 73 Length of query: 490 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 350 Effective length of database: 1,741,754,103 Effective search space: 609613936050 Effective search space used: 609613936050 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 133 (55.8 bits)