BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0557.0088.p
         (118 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DDG6.1 B1DDG6_9BACL Putative uncharacterized protein                172   7e-42
B1Y7B7.1 B1Y7B7_LEPCP Putative uncharacterized protein                150   5e-35
A8I553.1 A8I553_AZOC5 Uncharacterized conserved protein               148   1e-34
A7IL76.1 A7IL76_XANP2 Putative uncharacterized protein                148   1e-34
Q1GES0.1 Q1GES0_SILST Putative uncharacterized protein                148   2e-34

>B1DDG6.1 B1DDG6_9BACL Putative uncharacterized protein
          Length = 486

 Score =  172 bits (437), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 85/117 (72%), Positives = 97/117 (82%), Gaps = 1/117 (0%)

Query: 1   VLDHLKEMVVKETSLSGGYGMLIGSEASKDELADFRLKILADPARYIAQPIMSLSRAPVL 60
           VLDHL ++VVKETSLSGGYGMLIG  A+  E+ +F  +I  DP+RYIAQ  M LSRAPV+
Sbjct: 369 VLDHLDQLVVKETSLSGGYGMLIGPTATPKEIKEFAEEIKKDPSRYIAQTTMKLSRAPVM 428

Query: 61  SGGRMTPRHIDLRAFVLMGADRKPHVIPGGLTRVAMKEGSLVVNSSQGGGVKDTWVM 117
             G+MTPRHIDLRAF LMG D   HVIPGGLTRVA++EGSLVVNSSQGGGVKDTWV+
Sbjct: 429 VDGQMTPRHIDLRAFALMGED-STHVIPGGLTRVALREGSLVVNSSQGGGVKDTWVL 484


>B1Y7B7.1 B1Y7B7_LEPCP Putative uncharacterized protein
          Length = 477

 Score =  150 bits (378), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 73/117 (62%), Positives = 90/117 (76%), Gaps = 2/117 (1%)

Query: 1   VLDHLKEMVVKETSLSGGYGMLIGSEASKDELADFRLKILADPARYIAQPIMSLSRAPVL 60
           VLDHL E+VVKE   +GGYGML+G  ++K E+ADFR  +LA+P+ YIAQP +SLS  P  
Sbjct: 361 VLDHLGELVVKEVHGAGGYGMLVGPASTKAEIADFREHLLANPSNYIAQPTLSLSTCPTF 420

Query: 61  SGGRMTPRHIDLRAFVLMGADRKPHVIPGGLTRVAMKEGSLVVNSSQGGGVKDTWVM 117
               + PRHIDLR FVL G  ++  ++PGGLTRVA+KEGSLVVNSSQGGG KDTWV+
Sbjct: 421 VDSGIAPRHIDLRPFVLSG--KEVQMVPGGLTRVALKEGSLVVNSSQGGGTKDTWVL 475


>A8I553.1 A8I553_AZOC5 Uncharacterized conserved protein
          Length = 471

 Score =  148 bits (374), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 91/117 (77%), Gaps = 1/117 (0%)

Query: 1   VLDHLKEMVVKETSLSGGYGMLIGSEASKDELADFRLKILADPARYIAQPIMSLSRAPVL 60
           VL+HL+E+VVKE   SGGYGML+G ++ K ++  FR K+ ADP+ +IAQP ++LS  P L
Sbjct: 354 VLEHLEELVVKEVHGSGGYGMLVGPKSDKAQIEAFRAKLKADPSNFIAQPTLALSTCPTL 413

Query: 61  SGGRMTPRHIDLRAFVLMGADRKPHVIPGGLTRVAMKEGSLVVNSSQGGGVKDTWVM 117
               + PRH+DLR F+L G+D K  ++PGGLTRVAMKEGSLVVNSSQGGG KDTWV+
Sbjct: 414 VDQGIAPRHVDLRPFILSGSD-KVRIVPGGLTRVAMKEGSLVVNSSQGGGTKDTWVL 469


>A7IL76.1 A7IL76_XANP2 Putative uncharacterized protein
          Length = 471

 Score =  148 bits (374), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 90/117 (76%), Gaps = 1/117 (0%)

Query: 1   VLDHLKEMVVKETSLSGGYGMLIGSEASKDELADFRLKILADPARYIAQPIMSLSRAPVL 60
           VL+HL E+VVKE   SGGYGML+G  + K ++  FR K++ADPA +IAQP ++LS  P +
Sbjct: 354 VLEHLPELVVKEVHGSGGYGMLVGPASDKAQIEKFRAKLVADPANFIAQPTLALSTCPTM 413

Query: 61  SGGRMTPRHIDLRAFVLMGADRKPHVIPGGLTRVAMKEGSLVVNSSQGGGVKDTWVM 117
               + PRH+DLR F+L G+D K  ++PGGLTRVAMKEGSLVVNSSQGGG KDTWV+
Sbjct: 414 VEKGVAPRHVDLRPFILSGSD-KVRIVPGGLTRVAMKEGSLVVNSSQGGGTKDTWVL 469


>Q1GES0.1 Q1GES0_SILST Putative uncharacterized protein
          Length = 486

 Score =  148 bits (373), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 73/117 (62%), Positives = 90/117 (76%), Gaps = 1/117 (0%)

Query: 1   VLDHLKEMVVKETSLSGGYGMLIGSEASKDELADFRLKILADPARYIAQPIMSLSRAPVL 60
           VLD+L+++VVKE   SGGYGMLIG  ASK +LA FR K+ A P  YIAQP ++LS  P+ 
Sbjct: 369 VLDNLEDLVVKEVHGSGGYGMLIGPTASKKDLAAFRRKLKARPGNYIAQPTLALSTVPIF 428

Query: 61  SGGRMTPRHIDLRAFVLMGADRKPHVIPGGLTRVAMKEGSLVVNSSQGGGVKDTWVM 117
           S   ++PRH+DLR FVL   + K H+ PGGLTRVA+K+GSLVVNSSQGGG KDTWV+
Sbjct: 429 SRAGLSPRHVDLRPFVLCSPN-KVHITPGGLTRVALKKGSLVVNSSQGGGTKDTWVL 484


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.136    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 712,641,518
Number of extensions: 26462014
Number of successful extensions: 55049
Number of sequences better than 1.0e-05: 469
Number of HSP's gapped: 54599
Number of HSP's successfully gapped: 469
Length of query: 118
Length of database: 3,060,696,203
Length adjustment: 84
Effective length of query: 34
Effective length of database: 2,269,330,943
Effective search space: 77157252062
Effective search space used: 77157252062
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)