BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0087.p (412 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DDG6.1 B1DDG6_9BACL Putative uncharacterized protein 446 e-123 B1DCF1.1 B1DCF1_9BACL Putative uncharacterized protein 351 6e-95 Q1ILC9.1 Q1ILC9_ACIBL Putative uncharacterized protein 327 1e-87 A9B2Y8.1 A9B2Y8_HERA2 Putative uncharacterized protein 323 1e-86 Q128H1.1 Q128H1_POLSJ Putative uncharacterized protein 320 2e-85 >B1DDG6.1 B1DDG6_9BACL Putative uncharacterized protein Length = 486 Score = 446 bits (1147), Expect = e-123, Method: Compositional matrix adjust. Identities = 211/335 (62%), Positives = 256/335 (76%) Query: 51 YPLQHFYDEMYADERSIRPHYKHVNRMFSGMSPEEXXXXXXXXXXXXXXXGITFTLYNPA 110 Y Q FYDEM+ + S+RPHY +++R+F+ M P E GITFTLY+P Sbjct: 12 YDSQSFYDEMFEKDFSVRPHYDNIHRLFARMKPSELTMRQHALNQRMMEEGITFTLYSPN 71 Query: 111 QDHPMERTIPFDMIPRIIPKGEWERLEAGIVQRITALNLFIHDIYHEQFIVKDGIVPRRM 170 Q P+ERTIPFD IPR+IPK EWE ++ G+ QR ALN+FIHDIYH Q IV DG++PRRM Sbjct: 72 QSEPLERTIPFDYIPRVIPKHEWEAVDRGVRQRTKALNMFIHDIYHAQRIVSDGVIPRRM 131 Query: 171 IISNCYFRPEMSGLRVPGGAYVTTSGIDLIRHHDGEYYVLEDNLRTPSGFSYLFKGRSLM 230 I+SN YFRPEM GL VPGG Y+T+SGIDLIR G Y+VLEDNLR+PSG+SYLFKGR++M Sbjct: 132 IVSNVYFRPEMMGLDVPGGVYITSSGIDLIRDEKGRYFVLEDNLRSPSGYSYLFKGRTIM 191 Query: 231 NQLFPELSLASSIRDVDHSLNRFLSVLRSLSPSRTKDPVIALLTPGEYNSAYYEHAFLAQ 290 ++LF +L L+SS++ ++ SLN FL LRSL+P+ KDP+IALLTPG YNSAYYEH FLAQ Sbjct: 192 SELFHDLYLSSSVQSIERSLNYFLRSLRSLTPNGKKDPLIALLTPGSYNSAYYEHTFLAQ 251 Query: 291 QMGIHLVEGRDLVAQDHKVYLKEMNGMXXXXXXXXXXXXXXXXXXAFQPNSLLGVAGLMN 350 Q+GIHLVEGRDLV +DHK+YL+++ G+ AFQP+SLLGV GLMN Sbjct: 252 QLGIHLVEGRDLVYKDHKIYLRDLRGLRQVDVIYRRIDDDFLDPLAFQPDSLLGVPGLMN 311 Query: 351 AYRAGNIAIANAPGTGVADDKAMYVYVPDMIRYYL 385 AYRAGNIAIANAPGTGVADDKA+Y YVPDMIRYYL Sbjct: 312 AYRAGNIAIANAPGTGVADDKAVYAYVPDMIRYYL 346 >B1DCF1.1 B1DCF1_9BACL Putative uncharacterized protein Length = 491 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 174/332 (52%), Positives = 218/332 (65%), Gaps = 1/332 (0%) Query: 56 FYDEMYADERSIRPHYKHVNRMFSGMSPEEXXXXXXXXXXXXXXXGITFTLY-NPAQDHP 114 FYDEM+ R HY + + + M EE GITFTLY N +D Sbjct: 22 FYDEMFEGRGKGRVHYGTMLQRLAKMGLEELKSRDALMQEEMVTQGITFTLYSNNPEDSS 81 Query: 115 MERTIPFDMIPRIIPKGEWERLEAGIVQRITALNLFIHDIYHEQFIVKDGIVPRRMIISN 174 ERTIPFD++PR+I +W L G+ QR+ ALNLFI DIYHEQ I+ DG++P MI++N Sbjct: 82 RERTIPFDLLPRMITTEDWALLSQGLKQRVKALNLFIRDIYHEQSILSDGLIPSDMILNN 141 Query: 175 CYFRPEMSGLRVPGGAYVTTSGIDLIRHHDGEYYVLEDNLRTPSGFSYLFKGRSLMNQLF 234 Y+ PEM G+ VPGG Y+ SGID+IR GEYYVLEDNLRTPSG SY++K R+LM LF Sbjct: 142 PYYVPEMVGVDVPGGVYIPLSGIDIIRGQSGEYYVLEDNLRTPSGLSYVYKNRALMTSLF 201 Query: 235 PELSLASSIRDVDHSLNRFLSVLRSLSPSRTKDPVIALLTPGEYNSAYYEHAFLAQQMGI 294 PEL IR +D +N L LRSL+P DP++ LLTPG YNSAYY+H FLAQ+MGI Sbjct: 202 PELFFDYRIRSIDRGMNALLGSLRSLAPHSKPDPLVVLLTPGIYNSAYYDHCFLAQEMGI 261 Query: 295 HLVEGRDLVAQDHKVYLKEMNGMXXXXXXXXXXXXXXXXXXAFQPNSLLGVAGLMNAYRA 354 LV+G DL+ +D VY+K + G+ F+ +SLLGV GLM+AY A Sbjct: 262 ELVQGNDLIVKDRIVYMKSLQGLRQVDVIYRRIDDEFLDPQVFRKDSLLGVPGLMDAYLA 321 Query: 355 GNIAIANAPGTGVADDKAMYVYVPDMIRYYLN 386 GN+A+ANAPGTG+ADDKA+Y +VPDMIRYYL Sbjct: 322 GNVALANAPGTGIADDKAVYAFVPDMIRYYLK 353 >Q1ILC9.1 Q1ILC9_ACIBL Putative uncharacterized protein Length = 488 Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 163/342 (47%), Positives = 217/342 (63%), Gaps = 2/342 (0%) Query: 45 LPGLSPYPLQHFYDEMYADERSIRPHYKHVNRMFSGMSPEEXXXXXXXXXXXXXXXGITF 104 + GL+ Y YDEM+ + +R HYK + + + EE GITF Sbjct: 11 VAGLTSYQFDDIYDEMFENASGVREHYKPLFDLLMSLPAEEVRRRKHSADVSFLHQGITF 70 Query: 105 TLYNPAQDHPMERTIPFDMIPRIIPKGEWERLEAGIVQRITALNLFIHDIYHEQFIVKDG 164 T+Y ++ E+ P+D++PRI+ EW R+E G+ QRITALNLF+ DIY++ I+ DG Sbjct: 71 TVYGRSEG--TEKIFPYDLLPRIVTSAEWARIEQGLAQRITALNLFLKDIYNDGKILADG 128 Query: 165 IVPRRMIISNCYFRPEMSGLRVPGGAYVTTSGIDLIRHHDGEYYVLEDNLRTPSGFSYLF 224 +VPR ++ S FR +M GL+VP YVT G DLIR +GE+ VLEDNLR PSG SY+ Sbjct: 129 VVPREVVYSCKQFRRQMRGLQVPRDVYVTVVGSDLIRLPNGEFVVLEDNLRVPSGVSYML 188 Query: 225 KGRSLMNQLFPELSLASSIRDVDHSLNRFLSVLRSLSPSRTKDPVIALLTPGEYNSAYYE 284 R +M ++FP L S+R +++ LS LRSL+P +P I LLTPG YNSAY+E Sbjct: 189 TNRRVMKRIFPHLFRRYSVRPIENYTQVLLSTLRSLAPGNRGEPTIVLLTPGVYNSAYFE 248 Query: 285 HAFLAQQMGIHLVEGRDLVAQDHKVYLKEMNGMXXXXXXXXXXXXXXXXXXAFQPNSLLG 344 HAFLA+QMGI LVEGRDL+ D+KVY++ G+ AF+P+S LG Sbjct: 249 HAFLARQMGIELVEGRDLLTHDNKVYMRTTTGLRRVDVIYRRVDDEYLDPLAFRPDSALG 308 Query: 345 VAGLMNAYRAGNIAIANAPGTGVADDKAMYVYVPDMIRYYLN 386 VAGL NAYRAGN+ +ANA GTGVADDKA+Y YVP +I+YYL+ Sbjct: 309 VAGLFNAYRAGNVTLANAVGTGVADDKALYAYVPKIIKYYLD 350 >A9B2Y8.1 A9B2Y8_HERA2 Putative uncharacterized protein Length = 480 Score = 323 bits (829), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 159/345 (46%), Positives = 222/345 (64%), Gaps = 5/345 (1%) Query: 45 LPGLSP---YPLQHFYDEMYADERSIRPHYKHVNRMFSGMSPEEXXXXXXXXXXXXXXXG 101 +P ++P Y L+ YDE++ + RPHY+ ++ + P+E G Sbjct: 1 MPDVAPFRQYQLETAYDELFLGPNTPRPHYRLLSERLRELPPDELARRQQAADLAFLNQG 60 Query: 102 ITFTLYNPAQDHPMERTIPFDMIPRIIPKGEWERLEAGIVQRITALNLFIHDIYHEQFIV 161 ITFT+Y +D ER P+D++PR++ EW+ +E G+ QR+TALNLF+ DIYHE+ I+ Sbjct: 61 ITFTVY--GRDEGTERIFPYDLLPRLLTAKEWDTIERGLAQRVTALNLFLRDIYHEETIL 118 Query: 162 KDGIVPRRMIISNCYFRPEMSGLRVPGGAYVTTSGIDLIRHHDGEYYVLEDNLRTPSGFS 221 K G+VPR ++ S +F +M G+ VP YV+ G DLIR G++ VLEDNLR PSG S Sbjct: 119 KAGVVPRELVYSCRHFSRQMRGVSVPRDRYVSIVGTDLIRLPSGQFAVLEDNLRVPSGVS 178 Query: 222 YLFKGRSLMNQLFPELSLASSIRDVDHSLNRFLSVLRSLSPSRTKDPVIALLTPGEYNSA 281 Y+ R +M ++FP+L + +R +DH L+ LRSL+P DP I LLTPG +NSA Sbjct: 179 YMLANRLVMKRVFPQLFSSYGVRSIDHYGQALLATLRSLAPQGRSDPTIVLLTPGVFNSA 238 Query: 282 YYEHAFLAQQMGIHLVEGRDLVAQDHKVYLKEMNGMXXXXXXXXXXXXXXXXXXAFQPNS 341 YYEH FLA+QMG+ LVEGRDL+ D+ VY++ G+ AF+P+S Sbjct: 239 YYEHTFLARQMGVELVEGRDLIVHDNVVYMRTTAGLRRVDVIYRRVDDEFIDPLAFRPDS 298 Query: 342 LLGVAGLMNAYRAGNIAIANAPGTGVADDKAMYVYVPDMIRYYLN 386 +LGVAGL+NAYRAGN+A+ANA GTGVADDKA+Y YVP MI++YL+ Sbjct: 299 VLGVAGLLNAYRAGNVALANALGTGVADDKAIYAYVPAMIKFYLD 343 >Q128H1.1 Q128H1_POLSJ Putative uncharacterized protein Length = 498 Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 164/338 (48%), Positives = 210/338 (62%), Gaps = 8/338 (2%) Query: 56 FYDEMYADERSIRPHYKHVNRMFSGMSPEEXXXXXXXXXXXXXXXGITFTLYNPAQDHP- 114 +DEM A E SIR HY+ R + PE GITF +Y A+D Sbjct: 5 MFDEMNATESSIRDHYQGYQRWLAKQPPEVMEARRAEAEMIFRRVGITFAVYG-AKDEDG 63 Query: 115 --MERTIPFDMIPRIIPKGEWERLEAGIVQRITALNLFIHDIYHEQFIVKDGIVPRRMII 172 ER IPFD+IPRIIP EW +E G+VQR+TALN FIHD+YH Q I+K G++P I Sbjct: 64 AGTERLIPFDLIPRIIPAQEWASMEKGLVQRVTALNRFIHDVYHGQEIIKAGVIPSEQIF 123 Query: 173 SNCYFRPEMSGLRVPGGAYVTTSGIDLIR----HHDGEYYVLEDNLRTPSGFSYLFKGRS 228 N FRPEM G+ VPG Y SGID++R +GEYYVLEDNLR PSG SY+ + R Sbjct: 124 QNSQFRPEMMGVDVPGNIYSHISGIDIVRAPNAQGEGEYYVLEDNLRVPSGVSYMLEDRK 183 Query: 229 LMNQLFPELSLASSIRDVDHSLNRFLSVLRSLSPSRTKDPVIALLTPGEYNSAYYEHAFL 288 +M +LFPEL + + V H + L LR+++P T +P + +LTPG YNSAY+EHAFL Sbjct: 184 MMMRLFPELFSENRVAPVAHYPDLLLETLRAMAPPATAEPTVVVLTPGMYNSAYFEHAFL 243 Query: 289 AQQMGIHLVEGRDLVAQDHKVYLKEMNGMXXXXXXXXXXXXXXXXXXAFQPNSLLGVAGL 348 AQQMG+ LVEG+DL +D+ VY++ G AF+PNS LG AGL Sbjct: 244 AQQMGVELVEGQDLFVRDNFVYMRTTRGPRRVDVIYRRVDDDFLDPLAFRPNSTLGCAGL 303 Query: 349 MNAYRAGNIAIANAPGTGVADDKAMYVYVPDMIRYYLN 386 +N YR+GN+++ NA GTGVADDK++Y YVP MI +YL Sbjct: 304 LNVYRSGNVSLCNAIGTGVADDKSIYPYVPKMIEFYLG 341 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.141 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,293,615,450 Number of extensions: 91659994 Number of successful extensions: 158528 Number of sequences better than 1.0e-05: 580 Number of HSP's gapped: 157333 Number of HSP's successfully gapped: 581 Length of query: 412 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 274 Effective length of database: 1,760,596,133 Effective search space: 482403340442 Effective search space used: 482403340442 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 132 (55.5 bits)