BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0557.0078.p (403 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGK3.1 B3KGK3_9BACI 3-oxoacyl-(Acyl-carrier-protein) synthase 2 682 0.0 B1DJL5.1 B1DJL5_9BACL 3-oxoacyl-(Acyl-carrier-protein) synthase 2 641 0.0 C0ZFP1.1 C0ZFP1_BREBN 3-oxoacyl-[acyl-carrier-protein] synthase ... 531 e-149 C0GHL0.1 C0GHL0_9FIRM 3-oxoacyl-(Acyl-carrier-protein) synthase 2 518 e-145 A6TRT6.1 A6TRT6_ALKMQ Beta-ketoacyl synthase-like protein 514 e-144 >B3KGK3.1 B3KGK3_9BACI 3-oxoacyl-(Acyl-carrier-protein) synthase 2 Length = 412 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/403 (80%), Positives = 362/403 (89%) Query: 1 MGVITSLGTDLDTFWDNLMSGKSGVSTVDTFDVSEYTTKIAASVKDFDPEERFGRKEARK 60 MGV+TSLG DLDTFW++LM GKSGVS ++ FDVS+YTT+IAAS+KDF+PE+ RKEARK Sbjct: 10 MGVMTSLGQDLDTFWNSLMEGKSGVSRIEAFDVSDYTTQIAASMKDFNPEDYMDRKEARK 69 Query: 61 MDRFVQFAVAAGEDALKDSGLVIGEGIDAERXXXXXXXXXXXLGTWEDNHNLLLEKGPKR 120 MDRFVQ AVAAG AL+DSGL IG DAER LGTWED HN+LLEKGPKR Sbjct: 70 MDRFVQLAVAAGSKALEDSGLDIGVNADAERVGVSIGSGIGGLGTWEDQHNILLEKGPKR 129 Query: 121 VSPFFIPMMIANMGSGQLSISLGAKGPNTTTVTACATGSHSIGESFRLIQRGDADAMICG 180 VSPFFIPMMIANM SGQ+SI+LGAKGPNTT VTACATG+HSIG+S+RLIQRGDAD MICG Sbjct: 130 VSPFFIPMMIANMASGQMSINLGAKGPNTTQVTACATGTHSIGDSYRLIQRGDADVMICG 189 Query: 181 GSEATIRPTGMAGFCAMRAMSTHNEEPEKASRPFDMDRDGFVMGEGAGILILESLEHAEK 240 G+EATIRPTGMAGFCAMRAMST N+EPEKASRPFD RDGFVMGEGAG+L++ESLEHA K Sbjct: 190 GAEATIRPTGMAGFCAMRAMSTRNDEPEKASRPFDTGRDGFVMGEGAGVLVIESLEHALK 249 Query: 241 RGAKIYAEVIGYGLSADAHHMTEPDPDGAARCIKMAIRDAGIAPEEIDYINAHGTSTPVG 300 RGAKIYAEV+GYGLSADAHH+TEPDPDGAARC+KMAIRDAGIAPE++DYINAHGTSTPVG Sbjct: 250 RGAKIYAEVVGYGLSADAHHITEPDPDGAARCMKMAIRDAGIAPEDVDYINAHGTSTPVG 309 Query: 301 DKSETSAVKKALGDHAYKVAISSTKSMTGHLLGAAGGVEAIICGLSLQKGMIAPTINLDN 360 D+SET AVK ALGDHAYKVA+SSTKSMTGHLLGAAGGVEA+ICGLSL+ IAPTINL++ Sbjct: 310 DRSETKAVKMALGDHAYKVAVSSTKSMTGHLLGAAGGVEAVICGLSLKNQTIAPTINLED 369 Query: 361 PDPECDLDYVPNVPRKADLNIVMSNSFGFGGHNATVILKKYNQ 403 DPECDLDYVPN PRKADL++VMSNSFGFGGHNAT+ILKKY + Sbjct: 370 QDPECDLDYVPNHPRKADLDVVMSNSFGFGGHNATIILKKYAE 412 >B1DJL5.1 B1DJL5_9BACL 3-oxoacyl-(Acyl-carrier-protein) synthase 2 Length = 413 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 299/402 (74%), Positives = 346/402 (86%), Gaps = 1/402 (0%) Query: 1 MGVITSLGTDLDTFWDNLMSGKSGVSTVDTFDVSEYTTKIAASVKDFDPEE-RFGRKEAR 59 MGVITSLG DL+ FW NLM GKSGVS ++ FDVSEY T+IAA VK+F+PE+ +KEAR Sbjct: 10 MGVITSLGADLEQFWGNLMEGKSGVSHIEAFDVSEYPTQIAAEVKNFNPEDYNLDKKEAR 69 Query: 60 KMDRFVQFAVAAGEDALKDSGLVIGEGIDAERXXXXXXXXXXXLGTWEDNHNLLLEKGPK 119 +MDRFVQFA A A+KD+GL IG +D ER LGTWED HN+LLEKGPK Sbjct: 70 RMDRFVQFASVASLSAVKDAGLEIGTNVDPERVGVIVGSGIGGLGTWEDQHNILLEKGPK 129 Query: 120 RVSPFFIPMMIANMGSGQLSISLGAKGPNTTTVTACATGSHSIGESFRLIQRGDADAMIC 179 RVSPFFIPMMIANM SGQ+S+ GAKGPN+T VTACATG+HSIG+S+++IQRGDAD MIC Sbjct: 130 RVSPFFIPMMIANMASGQVSMLTGAKGPNSTAVTACATGTHSIGDSYKMIQRGDADVMIC 189 Query: 180 GGSEATIRPTGMAGFCAMRAMSTHNEEPEKASRPFDMDRDGFVMGEGAGILILESLEHAE 239 GG+EATIRPTG+AGFC+MRAMS N+EPEKASRPFD+DRDGF+MGEGAG+LILESLEHA+ Sbjct: 190 GGAEATIRPTGLAGFCSMRAMSVRNDEPEKASRPFDIDRDGFIMGEGAGVLILESLEHAQ 249 Query: 240 KRGAKIYAEVIGYGLSADAHHMTEPDPDGAARCIKMAIRDAGIAPEEIDYINAHGTSTPV 299 +RGA IYAEVIGYG+S DAHHMTEPDPDGAARC+ A++DAGI PE IDYINAHGTSTPV Sbjct: 250 QRGAHIYAEVIGYGMSGDAHHMTEPDPDGAARCMVKALKDAGIEPEAIDYINAHGTSTPV 309 Query: 300 GDKSETSAVKKALGDHAYKVAISSTKSMTGHLLGAAGGVEAIICGLSLQKGMIAPTINLD 359 GD+SETSA+KKA GDHAYK+A+SSTKSMTGHLLGAAGGVEA+I GL+LQ G+IAPTINL+ Sbjct: 310 GDRSETSAIKKAFGDHAYKLAVSSTKSMTGHLLGAAGGVEAVILGLTLQNGIIAPTINLE 369 Query: 360 NPDPECDLDYVPNVPRKADLNIVMSNSFGFGGHNATVILKKY 401 N DPE DLDYVPN PRKAD+ +SNSFGFGGHNAT+++K Y Sbjct: 370 NQDPELDLDYVPNTPRKADVRTALSNSFGFGGHNATIVMKVY 411 >C0ZFP1.1 C0ZFP1_BREBN 3-oxoacyl-[acyl-carrier-protein] synthase II EC=2.3.1.41 Length = 413 Score = 531 bits (1368), Expect = e-149, Method: Compositional matrix adjust. Identities = 250/403 (62%), Positives = 315/403 (78%), Gaps = 3/403 (0%) Query: 1 MGVITSLGTDLDTFWDNLMSGKSGVSTVDTFDVSEYTTKIAASVKDFDPEERFGRKEARK 60 +GV++ +G D TFW++L+ GKSG+ V FD S+Y T+IA VK+FDPE+ +KE R+ Sbjct: 10 VGVVSPVGNDAQTFWNSLLEGKSGIDRVAAFDASDYPTQIAGEVKNFDPEQYMDKKEIRR 69 Query: 61 MDRFVQFAVAAGEDALKDSGLVIGEGIDAERXXXXXXXXXXXLGTWEDNHNLLLEKGPKR 120 DRFVQF +AA + A++D+ L I +AER L TWE+ H++LLEKGP+R Sbjct: 70 TDRFVQFGLAAAKMAVEDAKLEITPE-NAERVGVYIGSGIGGLTTWEEQHSVLLEKGPRR 128 Query: 121 VSPFFIPMMIANMGSGQLSISLGAKGPNTTTVTACATGSHSIGESFRLIQRGDADAMICG 180 VSPFFIPM+IANM SG +SI GAKGP ++ +TACATG+++IGE+ RLIQ AD MI G Sbjct: 129 VSPFFIPMLIANMASGAVSIQYGAKGPTSSAITACATGTNAIGEALRLIQFDHADVMIAG 188 Query: 181 GSEATIRPTGMAGFCAMRAMSTHNEEPEKASRPFDMDRDGFVMGEGAGILILESLEHAEK 240 G+EAT+RP G AGFC+ +AMST N+EP+KASRPFD DRDGFVMGEGAG+LILE LEHA+K Sbjct: 189 GAEATVRPMGFAGFCSAKAMSTRNDEPQKASRPFDKDRDGFVMGEGAGVLILEELEHAKK 248 Query: 241 RGAKIYAEVIGYGLSADAHHMTEPDP--DGAARCIKMAIRDAGIAPEEIDYINAHGTSTP 298 RGA I AE+IGYG+SADAHH+T P P +GAARC+ A++DAG+ P E+ YINAHGTST Sbjct: 249 RGATIIAELIGYGMSADAHHITSPSPGGEGAARCMASALKDAGVDPTEVQYINAHGTSTG 308 Query: 299 VGDKSETSAVKKALGDHAYKVAISSTKSMTGHLLGAAGGVEAIICGLSLQKGMIAPTINL 358 GD +ET A+K G+HAYK+A+SSTKSMTGHLLGA GGVEAI +L+ ++ PTINL Sbjct: 309 QGDIAETQAIKTVFGEHAYKLAVSSTKSMTGHLLGATGGVEAIATAYALRDQILPPTINL 368 Query: 359 DNPDPECDLDYVPNVPRKADLNIVMSNSFGFGGHNATVILKKY 401 +NPDPECDLDYVPN RKA +N+ +SN+FGFGGHNATVILK+Y Sbjct: 369 ENPDPECDLDYVPNHARKATVNVAVSNTFGFGGHNATVILKRY 411 >C0GHL0.1 C0GHL0_9FIRM 3-oxoacyl-(Acyl-carrier-protein) synthase 2 Length = 413 Score = 518 bits (1333), Expect = e-145, Method: Compositional matrix adjust. Identities = 242/403 (60%), Positives = 311/403 (77%), Gaps = 3/403 (0%) Query: 1 MGVITSLGTDLDTFWDNLMSGKSGVSTVDTFDVSEYTTKIAASVKDFDPEERFGRKEARK 60 +G +T +G + FW+NL SGKSG+S V F+V +Y T++ A V DF P + +KEAR+ Sbjct: 10 LGAVTPVGIGKEKFWENLCSGKSGISRVSHFNVDDYPTQVGAEVSDFAPHDFIDKKEARR 69 Query: 61 MDRFVQFAVAAGEDALKDSGLVIGEGIDAERXXXXXXXXXXXLGTWEDNHNLLLEKGPKR 120 MDRF QFAVAA A+ D+ L + E ID ER + T E+ ++L EKGP+R Sbjct: 70 MDRFGQFAVAAARMAIDDAKLDV-EAIDKERAGVSVGSGIGGIITIEEQIDVLKEKGPRR 128 Query: 121 VSPFFIPMMIANMGSGQLSISLGAKGPNTTTVTACATGSHSIGESFRLIQRGDADAMICG 180 +SPFF+PM+IANM SG +SI G KGPNTT VTACATG+HSIGE+ + IQ G AD M+ G Sbjct: 129 ISPFFVPMLIANMASGYISIEFGLKGPNTTLVTACATGTHSIGEALKTIQLGAADVMLAG 188 Query: 181 GSEATIRPTGMAGFCAMRAMSTHNEEPEKASRPFDMDRDGFVMGEGAGILILESLEHAEK 240 GSEA P AGFCAMRAMST N+EP++ASRPFD++RDGFVMGEG+G+++LESLEHA+ Sbjct: 189 GSEAAFSPIAFAGFCAMRAMSTRNDEPQRASRPFDLERDGFVMGEGSGVVVLESLEHAQA 248 Query: 241 RGAKIYAEVIGYGLSADAHHMTEPDPD--GAARCIKMAIRDAGIAPEEIDYINAHGTSTP 298 RGAKIYAEV GYGLS DA+H+T PDPD GA RC+ A++DA +APE +DYINAHGTST Sbjct: 249 RGAKIYAEVAGYGLSGDAYHITAPDPDGSGARRCMSTALQDAELAPETLDYINAHGTSTG 308 Query: 299 VGDKSETSAVKKALGDHAYKVAISSTKSMTGHLLGAAGGVEAIICGLSLQKGMIAPTINL 358 + DK+E++A+K GDHA+K+A+SSTKSMTGHLLGAAGGVEAI+C LS+++G+I PT+N Sbjct: 309 LNDKTESAAIKMVFGDHAHKLAVSSTKSMTGHLLGAAGGVEAIVCALSIERGIIPPTVNY 368 Query: 359 DNPDPECDLDYVPNVPRKADLNIVMSNSFGFGGHNATVILKKY 401 +NPDP+CDLDY PN + +++ MSNSFGFGG NA++ILKK+ Sbjct: 369 ENPDPDCDLDYTPNKAAQRQVSVAMSNSFGFGGTNASLILKKF 411 >A6TRT6.1 A6TRT6_ALKMQ Beta-ketoacyl synthase-like protein Length = 414 Score = 514 bits (1324), Expect = e-144, Method: Compositional matrix adjust. Identities = 251/403 (62%), Positives = 308/403 (76%), Gaps = 3/403 (0%) Query: 1 MGVITSLGTDLDTFWDNLMSGKSGVSTVDTFDVSEYTTKIAASVKDFDPEERFGRKEARK 60 +G IT +G + FW +L++G SGVS + FD SE TKIAA VKDFD E+ +KE RK Sbjct: 10 LGCITPVGVGKEQFWSSLINGVSGVSEITRFDASELPTKIAAVVKDFDGEDYIDKKELRK 69 Query: 61 MDRFVQFAVAAGEDALKDSGLVIGEGIDAERXXXXXXXXXXXLGTWEDNHNLLLEKGPKR 120 MDRF QFAVAA + A++DSG + E I ER + T E +LEKG KR Sbjct: 70 MDRFTQFAVAASQLAIEDSGCNLEE-IVQERFGVVLGSGIGGIETLEAQKEKMLEKGAKR 128 Query: 121 VSPFFIPMMIANMGSGQLSISLGAKGPNTTTVTACATGSHSIGESFRLIQRGDADAMICG 180 VSPFFIPMMI+NMGSG +S+ LGAKGPNTT VTACA+ +++IGE+F++IQRGDAD M+ G Sbjct: 129 VSPFFIPMMISNMGSGYISMILGAKGPNTTVVTACASATNAIGEAFKIIQRGDADMMMTG 188 Query: 181 GSEATIRPTGMAGFCAMRAMSTHNEEPEKASRPFDMDRDGFVMGEGAGILILESLEHAEK 240 G+EA+I P MAGFC+M+AMST NEEPEKASRPFD DRDGFVMGEG+G+L+LE L+HA K Sbjct: 189 GAEASITPLAMAGFCSMKAMSTRNEEPEKASRPFDKDRDGFVMGEGSGMLLLEDLDHALK 248 Query: 241 RGAKIYAEVIGYGLSADAHHMTEPDP--DGAARCIKMAIRDAGIAPEEIDYINAHGTSTP 298 RGAKIY EV+GYG+SADA+H+T P P +GAAR ++ A+ DA PEEIDYINAHGTSTP Sbjct: 249 RGAKIYGEVVGYGMSADAYHITSPAPGGEGAARAMQNALNDAKANPEEIDYINAHGTSTP 308 Query: 299 VGDKSETSAVKKALGDHAYKVAISSTKSMTGHLLGAAGGVEAIICGLSLQKGMIAPTINL 358 D+ ET A+K +HA K+ ISSTKSMTGHLLGAAGG+EA+ C L++Q+G+I PTIN Sbjct: 309 YNDQFETMAIKTVFKEHASKLCISSTKSMTGHLLGAAGGIEAMACVLAIQEGVIPPTINY 368 Query: 359 DNPDPECDLDYVPNVPRKADLNIVMSNSFGFGGHNATVILKKY 401 PDPECDLDYVPN+ R ++N +SNS GFGGHNATV+ KKY Sbjct: 369 TTPDPECDLDYVPNIARNREVNYALSNSLGFGGHNATVLFKKY 411 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,397,090,776 Number of extensions: 100351886 Number of successful extensions: 301377 Number of sequences better than 1.0e-05: 9317 Number of HSP's gapped: 269584 Number of HSP's successfully gapped: 10548 Length of query: 403 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 265 Effective length of database: 1,760,596,133 Effective search space: 466557975245 Effective search space used: 466557975245 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)